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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NKIRAS1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
18.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
16.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
16.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
14.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
14.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
13.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
13.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
13.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
11.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
11.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
10.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
9.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
8.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
8.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
8.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
8.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
8.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
8.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
8.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
7.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
7.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
7.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
7.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
7.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
6.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
6.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
6.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
6.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
6.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
6.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
6.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
5.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
5.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
5.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
5.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
5.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
5.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
5.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
5.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
5.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
4.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
4.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
4.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
4.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
4.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
3.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
3.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
3.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
2.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NKIRAS1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.0
Number of samples
231
Samples
Sample
Description
TPM
DO23513
0 years, male, NA, stage:3, alive, 1200 days
20.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
13.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
13.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
11.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
10.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
10.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
10.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
9.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
9.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
8.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
7.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
7.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
7.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
6.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
6.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
6.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
6.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
6.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
6.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
5.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
5.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
5.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
5.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
5.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
5.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
5.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
5.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
5.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
5.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
5.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
5.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
4.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
4.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
4.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
4.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
4.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
4.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
4.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
4.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
4.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
4.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
4.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
4.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
4.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
3.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
3.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
3.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
3.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
3.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
3.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
3.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
3.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
3.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
3.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
3.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
3.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
3.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
3.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
3.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
3.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
3.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
3.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
3.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
2.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
2.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
2.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
1.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
1.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
0.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
618
Normal
1.0
745
Tumor
0.7
616
Normal
0.7
777
Tumor
0.7
628
Normal
0.6
964
Normal
0.6
1014
Normal
0.6
642
Normal
0.6
981
Tumor
0.6
636
Normal
0.6
491
Tumor
0.6
861
Tumor
0.5
958
Normal
0.5
1041
Tumor
0.5
714
Normal
0.5
746
Normal
0.5
364
Normal
0.5
778
Normal
0.5
554
Normal
0.5
818
Normal
0.5
494
Normal
0.5
698
Normal
0.5
615
Tumor
0.5
123
Tumor
0.5
186
Normal
0.5
534
Normal
0.5
488
Normal
0.5
327
Tumor
0.4
567
Tumor
0.4
984
Normal
0.4
968
Normal
0.4
222
Normal
0.4
786
Normal
0.4
913
Tumor
0.4
412
Normal
0.4
976
Normal
0.4
172
Normal
0.4
196
Normal
0.4
572
Normal
0.4
228
Normal
0.4
627
Tumor
0.4
483
Tumor
0.4
415
Tumor
0.4
487
Tumor
0.4
478
Normal
0.4
448
Normal
0.4
738
Normal
0.4
546
Normal
0.4
146
Normal
0.4
484
Normal
0.4
314
Normal
0.4
978
Normal
0.4
742
Normal
0.4
278
Normal
0.4
465
Tumor
0.4
286
Normal
0.4
128
Normal
0.4
915
Tumor
0.4
162
Normal
0.4
564
Normal
0.4
536
Normal
0.4
916
Normal
0.4
132
Normal
0.4
635
Tumor
0.4
852
Normal
0.4
568
Normal
0.4
298
Normal
0.4
518
Normal
0.4
824
Normal
0.4
862
Normal
0.4
482
Normal
0.4
466
Normal
0.3
328
Normal
0.3
431
Tumor
0.3
617
Tumor
0.3
756
Normal
0.3
982
Normal
0.3
514
Normal
0.3
883
Tumor
0.3
858
Normal
0.3
416
Normal
0.3
977
Tumor
0.3
574
Normal
0.3
957
Tumor
0.3
672
Normal
0.3
816
Normal
0.3
925
Tumor
0.3
356
Normal
0.3
528
Normal
0.3
1043
Tumor
0.3
533
Tumor
0.3
214
Normal
0.3
161
Tumor
0.3
513
Tumor
0.3
232
Normal
0.3
481
Tumor
0.3
148
Normal
0.3
696
Normal
0.3
666
Normal
0.3
722
Normal
0.3
716
Normal
0.3
664
Normal
0.3
145
Tumor
0.3
558
Normal
0.3
755
Tumor
0.3
728
Normal
0.3
866
Normal
0.3
1022
Normal
0.3
1044
Normal
0.3
865
Tumor
0.3
436
Normal
0.3
721
Tumor
0.2
648
Normal
0.2
114
Normal
0.2
218
Normal
0.2
1016
Normal
0.2
882
Normal
0.2
864
Normal
0.2
1028
Normal
0.2
477
Tumor
0.2
188
Normal
0.2
136
Normal
0.2
926
Normal
0.2
332
Normal
0.2
938
Normal
0.2
456
Normal
0.2
138
Normal
0.2
462
Normal
0.2
663
Tumor
0.2
697
Tumor
0.2
867
Tumor
0.2
515
Tumor
0.2
535
Tumor
0.2
857
Tumor
0.2
918
Normal
0.2
922
Normal
0.2
472
Normal
0.2
212
Normal
0.2
1026
Normal
0.2
966
Normal
0.2
452
Normal
0.2
525
Tumor
0.2
351
Tumor
0.2
686
Normal
0.2
428
Normal
0.2
147
Tumor
0.2
387
Tumor
0.2
272
Normal
0.2
874
Normal
0.2
185
Tumor
0.2
312
Normal
0.2
884
Normal
0.2
142
Normal
0.2
111
Normal
0.2
284
Normal
0.2
538
Normal
0.2
446
Normal
0.2
224
Normal
0.1
912
Normal
0.1
468
Normal
0.1
662
Normal
0.1
392
Normal
0.1
388
Normal
0.1
695
Tumor
0.1
526
Normal
0.1
851
Tumor
0.1
723
Tumor
0.1
641
Tumor
0.1
352
Normal
0.1
557
Tumor
0.1
516
Normal
0.1
492
Normal
0.1
523
Tumor
0.1
126
Normal
0.1
257
Tumor
0.1
131
Tumor
0.1
873
Tumor
0.1
112
Tumor
0.1
498
Normal
0.1
451
Tumor
0.1
921
Tumor
0.1
258
Normal
0.1
963
Tumor
0.1
424
Normal
0.1
744
Normal
0.1
823
Tumor
0.1
952
Normal
0.0
563
Tumor
0.0
124
Normal
0.0
924
Normal
0.0
955
Tumor
0.0
391
Tumor
0.0
785
Tumor
0.0
474
Normal
0.0
954
Normal
0.0
125
Tumor
0.0
524
Normal
0.0
464
Normal
0.0
741
Tumor
0.0
395
Tumor
0.0
231
Tumor
0.0
191
Tumor
0.0
376
Normal
0.0
917
Tumor
0.0
1031
Tumor
0.0
396
Normal
0.0
881
Tumor
0.0
171
Tumor
0.0
383
Tumor
0.0
661
Tumor
0.0
953
Tumor
0.0
262
Normal
0.0
192
Normal
0.0
1046
Normal
0.0
1013
Tumor
0.0
956
Normal
0.0
414
Normal
0.0
221
Tumor
0.0
127
Tumor
0.0
1032
Normal
0.0
868
Normal
0.0
394
Normal
0.0
313
Tumor
0.0
432
Normal
0.0
911
Tumor
0.0
135
Tumor
0.0
1042
Normal
0.0
737
Tumor
0.0
647
Tumor
0.0
195
Tumor
0.0
137
Tumor
0.0
665
Tumor
0.0
393
Tumor
-0.1
368
Normal
-0.1
213
Tumor
-0.1
354
Normal
-0.1
914
Normal
-0.1
878
Normal
-0.1
944
Normal
-0.1
1025
Tumor
-0.1
386
Normal
-0.1
422
Normal
-0.1
426
Normal
-0.1
361
Tumor
-0.1
217
Tumor
-0.1
141
Tumor
-0.1
537
Tumor
-0.1
427
Tumor
-0.1
463
Tumor
-0.1
671
Tumor
-0.1
975
Tumor
-0.1
365
Tumor
-0.1
573
Tumor
-0.1
527
Tumor
-0.1
455
Tumor
-0.1
863
Tumor
-0.1
268
Normal
-0.1
1021
Tumor
-0.1
261
Tumor
-0.1
362
Normal
-0.1
341
Tumor
-0.1
571
Tumor
-0.1
965
Tumor
-0.1
445
Tumor
-0.1
113
Tumor
-0.1
187
Tumor
-0.1
553
Tumor
-0.2
283
Tumor
-0.2
425
Tumor
-0.2
271
Tumor
-0.2
366
Normal
-0.2
517
Tumor
-0.2
713
Tumor
-0.2
937
Tumor
-0.2
384
Normal
-0.2
342
Normal
-0.2
267
Tumor
-0.2
277
Tumor
-0.2
355
Tumor
-0.2
497
Tumor
-0.2
375
Tumor
-0.2
471
Tumor
-0.2
421
Tumor
-0.2
943
Tumor
-0.2
461
Tumor
-0.2
467
Tumor
-0.3
344
Normal
-0.3
815
Tumor
-0.3
353
Tumor
-0.3
411
Tumor
-0.3
724
Normal
-0.3
447
Tumor
-0.3
434
Normal
-0.3
1027
Tumor
-0.3
433
Tumor
-0.3
493
Tumor
-0.3
423
Tumor
-0.4
715
Tumor
-0.4
923
Tumor
-0.4
814
Normal
-0.4
813
Tumor
-0.4
363
Tumor
-0.4
223
Tumor
-0.4
1015
Tumor
-0.4
951
Tumor
-0.4
473
Tumor
-0.4
685
Tumor
-0.4
444
Normal
-0.4
367
Tumor
-0.4
983
Tumor
-0.5
413
Tumor
-0.5
285
Tumor
-0.5
1045
Tumor
-0.5
967
Tumor
-0.5
385
Tumor
-0.5
443
Tumor
-0.5
358
Normal
-0.6
817
Tumor
-0.6
211
Tumor
-0.6
297
Tumor
-0.6
331
Tumor
-0.7
227
Tumor
-0.7
877
Tumor
-0.7
357
Tumor
-0.7
435
Tumor
-0.7
545
Tumor
-0.8
311
Tumor
-0.8
743
Tumor
-1.2
343
Tumor
-1.2
727
Tumor
-1.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
