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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL37A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1839.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8768.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7508.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6437.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6432.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6139.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6070.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5859.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5574.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5472.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5266.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5020.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4997.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4734.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4589.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4506.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4491.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4471.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4177.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4121.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3864.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3759.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3725.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3679.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3677.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
3665.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3643.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
3585.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3497.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3425.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3417.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3394.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3389.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3369.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3339.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3210.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
3167.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3134.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3130.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3126.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3110.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3091.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3058.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3047.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3032.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2982.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2930.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2920.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2882.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2877.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2875.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2875.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2831.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2817.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2795.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2787.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2782.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
2764.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2742.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2733.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2724.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2662.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2644.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2640.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2610.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2602.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2587.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2559.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2544.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2534.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2508.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2496.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2485.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2476.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2476.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
2467.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2439.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2433.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2418.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
2418.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2405.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2405.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2400.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2379.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2360.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2342.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
2326.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2315.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2311.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2275.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2267.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2186.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2183.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2176.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
2164.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
2154.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
2145.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2118.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2114.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2113.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2101.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2098.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2098.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2077.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2067.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2055.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2043.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
2037.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2021.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2020.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2017.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1989.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1967.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1964.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1961.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1954.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1935.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1924.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1912.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1905.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1903.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1889.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1880.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1877.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1866.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1847.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1832.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1827.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1819.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1805.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1800.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1796.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1794.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1782.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1780.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1776.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1765.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1753.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1748.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1738.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1735.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1734.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1724.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1709.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1700.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1699.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1693.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1691.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1687.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1686.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1675.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1668.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1665.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1661.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1659.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1641.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1637.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1635.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1630.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1619.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1614.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1610.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1604.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1593.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1587.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1575.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1574.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1571.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1569.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1564.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1555.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1552.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1539.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1533.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1525.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1523.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1521.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1514.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1508.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1508.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1500.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1498.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1497.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1495.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1483.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1483.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1472.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1457.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1457.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1456.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1450.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1443.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1439.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1434.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1434.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1434.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1431.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1425.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1422.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1420.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1419.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1418.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1410.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1408.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1391.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1391.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1390.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1388.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1383.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1383.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1382.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1373.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1370.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1370.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1363.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1362.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1352.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1351.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1347.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1329.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1328.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1311.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1310.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1304.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1304.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1302.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1296.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1287.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1281.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1280.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1279.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1278.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1274.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1273.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1254.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1248.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1244.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1244.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1242.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1232.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1225.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1214.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1212.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1210.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1209.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1208.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1207.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1198.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1196.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1193.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1191.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1184.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1177.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1162.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1161.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1160.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1159.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1157.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1153.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1144.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1131.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1130.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1122.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1114.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1108.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1105.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1103.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1100.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1092.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1090.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1081.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1077.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1076.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1066.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1064.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1063.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1060.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1060.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1059.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1059.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1053.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1051.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1050.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1047.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1045.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1045.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1034.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1028.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1019.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1014.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1009.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1008.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1007.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1003.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1003.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1002.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
998.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
996.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
986.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
985.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
984.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
984.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
983.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
976.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
975.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
963.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
959.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
928.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
921.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
907.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
905.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
900.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
900.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
891.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
885.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
880.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
875.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
865.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
864.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
860.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
857.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
854.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
853.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
853.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
850.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
847.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
838.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
834.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
832.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
825.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
823.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
823.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
809.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
804.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
798.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
785.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
771.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
770.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
763.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
752.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
747.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
740.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
738.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
736.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
729.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
725.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
714.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
686.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
659.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
632.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
617.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
600.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
599.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
598.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
596.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
592.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
591.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
585.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
540.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
519.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
514.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL37A is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1432.4
Number of samples
231
Samples
Sample
Description
TPM
DO50814
0 years, male, NA, stage:3, alive, 420 days
8083.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
7693.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
6716.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
3945.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
3524.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
3343.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
3206.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
3051.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
3005.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2993.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
2926.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
2912.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
2786.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2768.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
2765.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
2741.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
2694.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
2692.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
2640.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
2585.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
2534.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2447.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
2438.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
2403.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
2350.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
2345.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2276.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
2265.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
2262.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
2238.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
2228.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2220.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
2188.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
2179.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2158.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
2147.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
2124.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
2090.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
2073.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
2056.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
2033.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
2015.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
1987.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1957.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
1871.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
1855.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
1848.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
1842.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
1829.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
1816.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
1809.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1808.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1805.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
1774.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
1761.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
1760.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1745.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
1715.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1712.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
1691.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1681.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1680.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1678.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
1672.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
1666.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
1662.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
1659.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
1656.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
1652.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
1648.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
1632.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
1626.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1618.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
1593.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
1561.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
1555.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1550.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
1550.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1528.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
1525.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
1514.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1512.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
1504.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1491.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1467.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
1462.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1452.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
1441.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
1437.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
1433.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
1432.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
1423.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
1400.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
1397.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
1373.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
1346.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1341.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
1330.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
1321.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1321.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1320.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
1309.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1308.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
1283.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
1282.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
1276.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
1268.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
1263.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
1241.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1238.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
1228.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
1226.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
1216.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
1207.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
1200.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
1194.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1190.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
1187.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
1186.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
1185.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
1173.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
1172.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
1143.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1130.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
1129.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
1120.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
1118.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1094.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
1083.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1083.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
1078.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
1061.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1056.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1055.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
1045.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
1043.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
1039.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1031.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
1030.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1021.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1011.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
1011.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
1004.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
994.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
990.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
983.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
981.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
977.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
976.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
962.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
959.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
949.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
942.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
941.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
938.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
938.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
926.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
926.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
924.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
924.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
914.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
914.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
908.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
894.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
884.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
884.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
884.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
882.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
879.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
870.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
868.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
867.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
864.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
857.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
838.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
835.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
833.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
831.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
824.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
813.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
805.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
804.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
804.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
800.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
795.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
793.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
770.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
769.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
768.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
758.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
757.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
756.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
751.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
740.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
737.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
736.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
731.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
730.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
715.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
696.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
658.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
654.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
648.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
647.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
646.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
644.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
642.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
641.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
637.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
629.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
629.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
600.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
596.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
584.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
580.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
564.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
563.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
562.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
555.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
549.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
548.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
540.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
485.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
474.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
444.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
435.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
405.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
391.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
368.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
355.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
280.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.6
1025
Tumor
0.5
1021
Tumor
0.5
537
Tumor
0.5
965
Tumor
0.5
131
Tumor
0.5
285
Tumor
0.5
685
Tumor
0.5
567
Tumor
0.4
815
Tumor
0.4
223
Tumor
0.4
745
Tumor
0.4
1027
Tumor
0.4
851
Tumor
0.3
214
Normal
0.3
983
Tumor
0.3
523
Tumor
0.3
865
Tumor
0.3
327
Tumor
0.3
314
Normal
0.3
981
Tumor
0.3
957
Tumor
0.3
617
Tumor
0.3
1043
Tumor
0.3
278
Normal
0.3
921
Tumor
0.3
497
Tumor
0.3
937
Tumor
0.2
737
Tumor
0.2
746
Normal
0.2
221
Tumor
0.2
191
Tumor
0.2
636
Normal
0.2
1015
Tumor
0.2
967
Tumor
0.2
1031
Tumor
0.2
558
Normal
0.2
715
Tumor
0.2
1028
Normal
0.2
861
Tumor
0.2
421
Tumor
0.2
955
Tumor
0.2
923
Tumor
0.2
227
Tumor
0.2
422
Normal
0.2
777
Tumor
0.2
436
Normal
0.2
1041
Tumor
0.2
525
Tumor
0.2
564
Normal
0.2
466
Normal
0.2
517
Tumor
0.2
228
Normal
0.2
515
Tumor
0.2
727
Tumor
0.2
533
Tumor
0.2
527
Tumor
0.2
353
Tumor
0.2
817
Tumor
0.2
331
Tumor
0.2
213
Tumor
0.2
755
Tumor
0.2
414
Normal
0.2
218
Normal
0.2
778
Normal
0.2
951
Tumor
0.2
738
Normal
0.1
918
Normal
0.1
412
Normal
0.1
975
Tumor
0.1
473
Tumor
0.1
471
Tumor
0.1
952
Normal
0.1
142
Normal
0.1
277
Tumor
0.1
222
Normal
0.1
743
Tumor
0.1
518
Normal
0.1
367
Tumor
0.1
493
Tumor
0.1
864
Normal
0.1
785
Tumor
0.1
966
Normal
0.1
1026
Normal
0.1
467
Tumor
0.1
1014
Normal
0.1
554
Normal
0.1
443
Tumor
0.1
526
Normal
0.1
284
Normal
0.1
393
Tumor
0.1
455
Tumor
0.1
387
Tumor
0.1
271
Tumor
0.1
915
Tumor
0.1
286
Normal
0.1
616
Normal
0.1
756
Normal
0.1
481
Tumor
0.1
135
Tumor
0.1
664
Normal
0.1
728
Normal
0.1
696
Normal
0.1
956
Normal
0.1
187
Tumor
0.1
563
Tumor
0.1
535
Tumor
0.1
411
Tumor
0.1
312
Normal
0.1
363
Tumor
0.1
572
Normal
0.1
514
Normal
0.1
431
Tumor
0.1
721
Tumor
0.1
823
Tumor
0.1
883
Tumor
0.1
528
Normal
0.1
982
Normal
0.1
878
Normal
0.1
697
Tumor
0.1
977
Tumor
0.1
425
Tumor
0.1
448
Normal
0.1
553
Tumor
0.1
573
Tumor
0.1
462
Normal
0.1
545
Tumor
0.1
355
Tumor
0.1
944
Normal
0.1
426
Normal
0.1
1022
Normal
0.1
984
Normal
0.1
824
Normal
0.1
968
Normal
0.1
852
Normal
0.1
424
Normal
0.1
494
Normal
0.1
461
Tumor
0.1
428
Normal
0.1
392
Normal
0.1
524
Normal
0.1
433
Tumor
0.1
513
Tumor
0.0
628
Normal
0.0
352
Normal
0.0
358
Normal
0.0
136
Normal
0.0
474
Normal
0.0
111
Normal
0.0
212
Normal
0.0
723
Tumor
0.0
128
Normal
0.0
924
Normal
0.0
483
Tumor
0.0
332
Normal
0.0
356
Normal
0.0
724
Normal
0.0
267
Tumor
0.0
813
Tumor
0.0
568
Normal
0.0
362
Normal
0.0
647
Tumor
0.0
432
Normal
0.0
922
Normal
0.0
385
Tumor
0.0
913
Tumor
0.0
686
Normal
0.0
484
Normal
0.0
147
Tumor
0.0
258
Normal
0.0
648
Normal
0.0
742
Normal
0.0
663
Tumor
0.0
816
Normal
0.0
546
Normal
0.0
516
Normal
0.0
232
Normal
0.0
487
Tumor
0.0
786
Normal
0.0
1032
Normal
0.0
492
Normal
0.0
873
Tumor
0.0
413
Tumor
0.0
257
Tumor
0.0
866
Normal
0.0
196
Normal
0.0
137
Tumor
0.0
195
Tumor
0.0
1013
Tumor
0.0
435
Tumor
0.0
354
Normal
0.0
217
Tumor
0.0
926
Normal
0.0
671
Tumor
0.0
261
Tumor
0.0
882
Normal
0.0
1016
Normal
0.0
964
Normal
0.0
113
Tumor
0.0
695
Tumor
0.0
211
Tumor
0.0
943
Tumor
0.0
867
Tumor
0.0
534
Normal
0.0
192
Normal
0.0
698
Normal
0.0
172
Normal
0.0
148
Normal
0.0
468
Normal
0.0
862
Normal
0.0
618
Normal
-0.1
744
Normal
-0.1
434
Normal
-0.1
881
Tumor
-0.1
571
Tumor
-0.1
1046
Normal
-0.1
262
Normal
-0.1
912
Normal
-0.1
427
Tumor
-0.1
1042
Normal
-0.1
342
Normal
-0.1
963
Tumor
-0.1
672
Normal
-0.1
395
Tumor
-0.1
365
Tumor
-0.1
141
Tumor
-0.1
615
Tumor
-0.1
447
Tumor
-0.1
145
Tumor
-0.1
298
Normal
-0.1
376
Normal
-0.1
488
Normal
-0.1
954
Normal
-0.1
1044
Normal
-0.1
394
Normal
-0.1
446
Normal
-0.1
364
Normal
-0.1
477
Tumor
-0.1
716
Normal
-0.1
388
Normal
-0.1
162
Normal
-0.1
953
Tumor
-0.1
574
Normal
-0.1
976
Normal
-0.1
914
Normal
-0.1
368
Normal
-0.1
456
Normal
-0.1
272
Normal
-0.1
938
Normal
-0.1
911
Tumor
-0.1
818
Normal
-0.1
224
Normal
-0.1
464
Normal
-0.1
874
Normal
-0.1
283
Tumor
-0.1
661
Tumor
-0.1
714
Normal
-0.1
536
Normal
-0.1
416
Normal
-0.1
452
Normal
-0.1
415
Tumor
-0.1
713
Tumor
-0.1
482
Normal
-0.1
146
Normal
-0.1
186
Normal
-0.1
857
Tumor
-0.1
423
Tumor
-0.1
916
Normal
-0.1
958
Normal
-0.1
472
Normal
-0.1
123
Tumor
-0.1
391
Tumor
-0.1
386
Normal
-0.1
538
Normal
-0.1
814
Normal
-0.1
114
Normal
-0.2
858
Normal
-0.2
344
Normal
-0.2
463
Tumor
-0.2
396
Normal
-0.2
722
Normal
-0.2
127
Tumor
-0.2
884
Normal
-0.2
357
Tumor
-0.2
665
Tumor
-0.2
465
Tumor
-0.2
188
Normal
-0.2
662
Normal
-0.2
877
Tumor
-0.2
361
Tumor
-0.2
925
Tumor
-0.2
666
Normal
-0.2
132
Normal
-0.2
126
Normal
-0.2
641
Tumor
-0.2
351
Tumor
-0.2
313
Tumor
-0.2
384
Normal
-0.2
444
Normal
-0.2
642
Normal
-0.2
478
Normal
-0.2
268
Normal
-0.2
375
Tumor
-0.2
124
Normal
-0.2
451
Tumor
-0.2
328
Normal
-0.2
978
Normal
-0.2
491
Tumor
-0.2
185
Tumor
-0.2
341
Tumor
-0.2
445
Tumor
-0.2
138
Normal
-0.3
366
Normal
-0.3
297
Tumor
-0.3
343
Tumor
-0.3
868
Normal
-0.3
171
Tumor
-0.3
1045
Tumor
-0.3
161
Tumor
-0.3
311
Tumor
-0.3
741
Tumor
-0.4
627
Tumor
-0.4
863
Tumor
-0.4
635
Tumor
-0.4
231
Tumor
-0.4
112
Tumor
-0.4
498
Normal
-0.4
383
Tumor
-0.5
125
Tumor
-0.5
917
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.