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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMB is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
61.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
40.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
37.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
33.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
30.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
28.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
21.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
12.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
2.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMB is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
60.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
1442.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
960.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
602.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
596.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
526.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
428.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
424.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
351.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
343.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
313.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
302.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
293.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
293.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
293.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
275.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
270.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
269.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
252.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
242.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
242.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
232.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
221.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
216.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
202.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
194.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
192.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
192.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
190.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
190.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
184.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
179.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
177.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
174.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
170.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
169.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
163.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
161.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
160.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
157.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
156.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
151.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
151.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
150.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
149.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
149.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
149.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
148.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
145.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
141.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
139.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
138.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
135.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
134.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
133.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
124.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
123.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
116.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
113.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
113.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
112.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
110.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
109.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
103.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
102.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
101.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
101.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
98.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
98.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
97.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
97.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
95.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
95.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
93.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
92.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
91.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
91.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
89.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
89.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
89.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
87.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
87.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
86.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
85.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
83.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
83.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
81.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
81.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
81.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
80.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
79.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
78.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
77.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
76.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
76.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
74.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
73.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
72.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
72.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
72.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
72.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
71.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
70.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
70.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
70.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
69.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
69.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
69.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
69.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
69.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
68.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
68.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
68.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
67.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
67.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
65.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
65.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
65.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
65.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
64.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
64.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
63.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
63.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
63.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
62.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
62.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
61.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
60.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
60.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
60.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
60.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
59.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
59.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
59.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
59.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
58.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
58.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
58.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
58.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
57.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
56.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
56.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
55.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
55.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
55.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
55.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
55.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
54.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
54.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
54.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
53.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
53.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
53.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
53.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
52.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
51.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
51.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
50.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
50.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
49.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
49.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
49.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
49.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
49.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
48.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
47.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
47.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
47.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
47.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
47.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
46.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
45.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
45.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
45.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
45.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
44.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
44.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
44.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
44.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
44.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
43.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
43.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
43.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
42.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
42.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
42.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
42.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
42.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
42.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
42.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
42.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
42.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
42.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
41.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
41.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
41.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
41.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
41.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
40.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
40.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
40.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
40.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
39.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
39.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
39.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
38.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
38.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
38.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
38.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
38.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
38.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
37.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
37.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
37.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
37.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
37.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
37.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
37.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
37.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
37.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
36.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
36.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
36.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
36.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
35.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
35.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
35.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
35.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
34.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
34.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
34.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
33.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
33.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
33.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
33.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
33.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
33.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
32.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
32.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
32.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
31.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
31.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
31.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
31.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
31.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
31.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
31.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
31.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
30.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
30.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
30.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
30.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
30.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
30.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
29.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
29.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
29.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
29.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
29.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
28.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
27.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
27.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
27.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
26.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
26.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
26.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
25.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
25.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
25.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
25.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
24.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
24.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
24.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
23.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
23.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
23.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
22.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
22.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
21.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
21.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
17.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
12.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
9.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
6.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
4.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMB is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
83.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
921.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
767.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
579.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
559.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
379.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
247.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
178.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
175.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
170.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
158.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
157.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
151.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
143.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
137.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
127.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
111.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
110.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
110.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
91.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
90.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
80.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
78.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
78.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
73.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
72.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
71.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
68.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
68.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
66.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
64.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
63.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
59.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
58.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
56.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
55.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
52.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
51.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
51.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
51.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
51.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
46.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
43.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
43.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
42.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
42.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
41.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
37.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
35.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
34.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
34.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
34.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
32.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
30.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
29.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
29.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
23.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
20.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMB is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
328.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
163.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
81.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
67.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
64.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
59.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
57.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
54.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
50.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
50.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
50.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
49.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
48.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
48.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
48.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
48.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
46.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
44.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
41.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
39.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
38.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
37.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
37.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
36.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
34.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
34.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
33.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
33.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
32.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
32.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
32.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
32.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
30.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
30.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
26.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
25.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
25.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
25.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
24.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
21.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
20.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
19.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
18.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
18.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
17.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
17.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
16.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
15.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
14.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
13.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
12.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
12.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
12.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
10.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
10.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
8.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
7.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
7.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
6.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
6.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
6.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
5.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
5.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
4.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
3.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
