HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.7 nTPM
HPA Brain:106.9 nTPM
GTEx:19.7 nTPM
FANTOM5:120.8 Scaled Tags Per Million
Pig:64.3 nTPM
Mouse:86.3 nTPM
Allen mouse:12.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002875
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 106.9
Sample id Sample description nTPM
Hippocampus
nTPM: 85.6
2148 Female, age 91, left hemisphere 100.1
2621 Female, age 67, right hemisphere 93.7
1898 Male, age 80, left hemisphere 86.4
1911 Female, age 85, right hemisphere 86.1
1855 Male, age 76, left hemisphere 74.9
2529 Female, age 94, left hemisphere 72.6
Dentate gyrus
nTPM: 89.2
2531 Female, age 67, both hemispheres 135.7
1927 Female, age 91, both hemispheres 100.7
2246 Female, age 85, both hemispheres 98.5
2528 Male, age 74, both hemispheres 74.2
2010 Male, age 76, both hemispheres 72.2
2530 Female, age 94, left hemisphere 54.1
Entorhinal gyrus
nTPM: 68.0
2764 Male, age 80, right hemisphere 81.2
1787 Male, age 76, left hemisphere 67.9
2686 Male, age 75, right hemisphere 67.5
2613 Female, age 94, left hemisphere 65.4
1938 Female, age 85, left hemisphere 63.7
2117 Female, age 91, right hemisphere 62.0
Hippocampus, CA1
nTPM: 100.4
2749 Male, age 80, left hemisphere 141.1
2045 Male, age 76, both hemispheres 98.5
1873 Female, age 85, both hemispheres 90.3
2082 Female, age 91, right hemisphere 88.7
2527 Male, age 74, both hemispheres 83.4
Hippocampus, CA2
nTPM: 74.7
2113 Female, age 91, right hemisphere 81.9
1940 Female, age 85, left hemisphere 81.1
1963 Male, age 80, left hemisphere 80.0
1892 Male, age 76, both hemispheres 76.4
2249 Male, age 74, both hemispheres 69.5
2437 Female, age 94, left hemisphere 59.3
Hippocampus, CA3
nTPM: 106.9
2620 Female, age 94, left hemisphere 140.6
2137 Male, age 80, left hemisphere 138.8
2861 Female, age 67, both hemispheres 118.8
2436 Male, age 74, both hemispheres 89.5
1891 Female, age 85, both hemispheres 78.0
1867 Male, age 76, both hemispheres 75.6
Parahippocampal cortex
nTPM: 80.5
2622 Female, age 67, right hemisphere 95.3
2693 Female, age 94, both hemispheres 91.6
2250 Female, age 67, right hemisphere 91.2
2245 Female, age 91, both hemispheres 86.2
1933 Female, age 85, both hemispheres 84.9
1850 Male, age 80, both hemispheres 84.1
2532 Female, age 72, left hemisphere 76.9
2018 Male, age 76, both hemispheres 69.3
1990 Female, age 91, right hemisphere 67.0
2692 Male, age 74, both hemispheres 58.7
Perirhinal gyrus
nTPM: 96.0
2521 Female, age 94, right hemisphere 106.3
1794 Male, age 80, right hemisphere 106.0
1841 Female, age 85, right hemisphere 98.7
1847 Female, age 91, left hemisphere 92.6
2848 Male, age 76, right hemisphere 76.4
Subiculum
nTPM: 72.5
2729 Female, age 91, right hemisphere 83.6
1977 Female, age 85, both hemispheres 82.3
1901 Male, age 80, both hemispheres 81.4
2619 Male, age 74, both hemispheres 63.6
2042 Male, age 76, both hemispheres 62.6
2438 Female, age 94, left hemisphere 61.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.7
Samples: 197

Max nTPM: 42.7
Min nTPM: 6.7
Std nTPM: 7.3
Median nTPM: 18.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 42.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 40.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 39.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 36.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 35.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 34.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 32.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 32.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 32.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 32.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 120.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.8
FF:10169-103B7 60 years, female 147.4
FF:10153-102I9 76 years, female 94.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 64.3
Pig sample Sample description nTPM
Subiculum
nTPM: 64.3
Samples: 4

Max nTPM: 72.5
Min nTPM: 53.5
Sample A Female 72.4
Sample B Female 58.8
Sample C Male 72.5
Sample D Male 53.5
Dorsal hippocampus
nTPM: 52.1
Samples: 4

Max nTPM: 63.3
Min nTPM: 39.4
Sample A Female 48.0
Sample B Female 57.5
Sample C Male 39.4
Sample D Male 63.3
Entorhinal cortex
nTPM: 62.9
Samples: 4

Max nTPM: 68.3
Min nTPM: 58.2
Sample A Female 68.3
Sample B Female 58.2
Sample C Male 60.3
Sample D Male 64.7
Ventral hippocampus
nTPM: 56.2
Samples: 4

Max nTPM: 69.5
Min nTPM: 46.1
Sample A Female 51.7
Sample B Female 57.6
Sample C Male 69.5
Sample D Male 46.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 86.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.3
Samples: 4

Max nTPM: 89.8
Min nTPM: 81.9
Sample A Male 89.3
Sample B Male 84.2
Sample C Female 81.9
Sample D Female 89.8
Hippocampal formation
nTPM: 85.2
Samples: 4

Max nTPM: 94.0
Min nTPM: 76.3
Sample A Male 80.2
Sample B Male 90.4
Sample C Female 94.0
Sample D Female 76.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.2
70302081 Antisense, RP_050607_03_E08, Mouse strain C57BL/6J (56 days, male) 15.1
74511986 Antisense, RP_060220_03_C11, Mouse strain C57BL/6J (56 days, male) 9.4

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