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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATG7 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
35.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
31.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
30.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
29.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
29.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
25.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
18.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
17.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
15.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
15.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
13.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
4.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATG7 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
43.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
41.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
40.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
40.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
31.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
30.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
29.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
26.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
25.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
24.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
23.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
22.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
22.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
20.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
19.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
19.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
17.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
17.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
16.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
16.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
15.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
15.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
14.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
13.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
13.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
13.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
12.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
12.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
11.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
11.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
6.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATG7 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
41.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
29.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
19.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
17.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
16.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
16.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
15.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ATG7 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
84.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
48.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
46.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
37.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
35.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
34.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
32.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
31.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
31.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
30.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
27.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
27.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
26.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
25.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
25.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
25.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
24.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
24.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
23.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
23.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
23.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
22.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
22.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
21.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
21.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
21.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
21.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
20.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
19.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
19.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
19.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
18.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
18.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
17.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
17.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
17.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
16.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
16.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
15.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
14.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
14.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
12.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
10.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
8.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
7.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
5.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.6
CPT0023350003
Tumor
0.9
CPT0011410003
Tumor
0.9
CPT0012550003
Tumor
0.8
CPT0002270011
Tumor
0.8
CPT0084560003
Tumor
0.8
CPT0078660003
Tumor
0.7
CPT0078800003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0076330003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0079230003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0065930003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0025290003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0069000003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0084590001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0010120001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0012640003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0076350001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0086830003
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0001550001
Normal
-0.3
CPT0079270003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0012900004
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0001340003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
