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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STMN3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
170.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
101.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
93.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
83.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
54.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
49.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
43.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
41.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
32.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
28.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
27.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
24.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
21.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
20.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
14.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
14.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
4.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STMN3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
342.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
311.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
271.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
264.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
241.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
225.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
219.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
201.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
194.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
191.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
189.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
182.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
164.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
160.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
148.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
147.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
134.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
126.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
119.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
119.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
115.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
112.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
112.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
111.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
110.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
110.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
108.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
107.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
105.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
103.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
103.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
103.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
100.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
99.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
97.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
91.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
91.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
89.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
89.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
88.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
88.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
87.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
85.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
84.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
84.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
84.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
84.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
83.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
83.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
82.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
82.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
81.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
81.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
81.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
80.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
78.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
78.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
77.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
77.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
76.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
76.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
76.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
75.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
75.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
75.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
75.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
75.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
74.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
74.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
73.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
73.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
73.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
73.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
73.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
72.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
71.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
71.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
71.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
70.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
70.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
70.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
70.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
70.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
69.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
69.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
69.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
69.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
67.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
67.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
66.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
66.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
66.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
66.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
65.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
64.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
64.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
64.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
63.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
63.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
62.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
62.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
62.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
62.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
62.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
61.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
61.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
61.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
61.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
61.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
60.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
60.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
60.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
60.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
60.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
59.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
59.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
59.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
58.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
58.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
58.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
57.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
57.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
57.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
57.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
57.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
57.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
56.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
56.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
56.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
56.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
56.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
56.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
55.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
55.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
54.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
54.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
54.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
54.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
54.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
54.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
54.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
53.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
53.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
53.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
53.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
53.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
52.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
51.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
51.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
51.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
51.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
51.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
50.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
50.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
50.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
50.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
49.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
49.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
49.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
48.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
48.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
48.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
48.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
48.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
48.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
47.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
47.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
47.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
47.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
47.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
46.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
46.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
46.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
46.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
46.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
46.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
46.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
46.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
46.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
45.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
45.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
45.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
45.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
45.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
45.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
45.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
45.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
44.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
44.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
44.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
44.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
44.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
43.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
43.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
42.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
42.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
42.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
42.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
42.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
41.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
41.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
41.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
41.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
41.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
41.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
40.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
40.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
40.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
40.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
40.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
40.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
39.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
39.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
39.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
39.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
38.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
38.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
38.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
38.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
38.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
38.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
38.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
37.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
37.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
37.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
36.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
36.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
36.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
36.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
36.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
36.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
35.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
35.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
35.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
35.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
35.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
35.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
35.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
34.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
34.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
34.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
34.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
34.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
34.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
34.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
34.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
34.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
34.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
33.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
33.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
33.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
32.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
32.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
32.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
32.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
32.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
32.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
32.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
32.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
32.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
31.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
31.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
31.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
31.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
30.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
30.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
30.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
30.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
30.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
30.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
30.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
29.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
29.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
29.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
29.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
29.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
29.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
29.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
29.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
29.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
28.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
28.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
28.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
27.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
27.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
27.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
27.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
26.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
26.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
25.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
25.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
25.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
25.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
25.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
25.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
24.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
24.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
24.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
23.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
23.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
22.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
21.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
21.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
20.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
19.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
18.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
18.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
17.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
16.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
13.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
12.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
10.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
8.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
5.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
4.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
2.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STMN3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
168.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
136.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
132.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
117.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
97.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
93.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
89.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
85.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
80.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
77.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
77.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
74.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
73.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
73.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
73.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
65.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
63.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
62.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
62.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
60.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
60.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
58.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
56.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
55.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
55.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
54.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
53.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
53.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
52.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
52.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
52.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
52.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
51.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
51.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
49.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
47.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
45.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
42.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
41.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
41.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
40.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
38.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
37.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
36.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
36.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
36.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
35.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
34.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
31.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
31.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
30.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
30.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
30.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
29.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
27.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
24.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
15.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
7.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STMN3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
110.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1159.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1015.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
789.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
774.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
680.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
655.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
571.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
536.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
499.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
477.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
465.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
454.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
440.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
388.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
385.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
365.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
331.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
323.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
316.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
314.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
288.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
274.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
261.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
242.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
239.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
233.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
230.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
228.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
227.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
226.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
218.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
213.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
203.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
195.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
192.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
189.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
188.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
188.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
182.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
177.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
175.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
174.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
173.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
172.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
171.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
169.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
168.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
164.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
162.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
158.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
155.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
155.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
155.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
154.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
154.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
152.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
151.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
151.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
150.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
145.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
145.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
144.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
142.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
141.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
141.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
138.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
135.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
135.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
134.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
133.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
132.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
129.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
129.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
129.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
127.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
127.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
126.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
126.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
125.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
125.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
123.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
120.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
119.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
118.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
115.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
114.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
112.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
111.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
110.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
108.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
105.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
105.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
104.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
101.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
100.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
99.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
98.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
98.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
96.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
96.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
96.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
95.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
95.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
94.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
94.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
93.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
93.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
90.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
90.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
89.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
89.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
88.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
88.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
87.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
87.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
86.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
86.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
85.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
85.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
83.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
82.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
82.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
81.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
79.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
78.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
78.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
77.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
76.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
76.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
75.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
75.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
73.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
73.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
73.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
71.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
70.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
69.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
69.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
69.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
69.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
69.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
68.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
68.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
68.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
68.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
67.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
66.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
65.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
63.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
62.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
61.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
61.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
60.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
59.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
59.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
58.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
58.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
55.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
55.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
54.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
54.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
54.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
53.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
52.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
52.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
49.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
49.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
49.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
48.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
47.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
47.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
45.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
45.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
44.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
44.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
43.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
43.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
43.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
43.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
42.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
41.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
41.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
41.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
41.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
40.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
40.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
38.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
38.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
37.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
35.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
35.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
33.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
33.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
33.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
32.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
32.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
32.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
32.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
31.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
31.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
30.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
30.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
29.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
29.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
29.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
27.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
25.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
22.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
13.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
5.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
5.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
4.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
4.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
3.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
2.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079410003
Tumor
1.9
CPT0020120003
Tumor
1.8
CPT0069000003
Tumor
1.8
CPT0017850003
Tumor
1.6
CPT0026410003
Tumor
1.0
CPT0017410003
Tumor
0.7
CPT0079480003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0077490003
Tumor
0.6
CPT0023350003
Tumor
0.5
CPT0084560003
Tumor
0.4
CPT0006440003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0084590001
Normal
0.2
CPT0078830003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0012550003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0065870003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0007470001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0009060003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0089020003
Tumor
-0.3
CPT0017450001
Normal
-0.3
CPT0088480003
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0020020001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0012920003
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0077500001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0012570003
Normal
-0.5
CPT0023710001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0018250001
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0012900004
Tumor
-0.6
CPT0009020003
Normal
-0.6
CPT0023360001
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0012290003
Normal
-0.8
CPT0087050003
Normal
-0.8
CPT0088500001
Normal
-0.9
CPT0088970003
Tumor
-0.9
CPT0012670003
Tumor
-1.0
CPT0089040001
Normal
-1.1
CPT0078530001
Normal
-1.1
CPT0078670001
Normal
-1.3
CPT0075130003
Tumor
-1.5
CPT0020130001
Normal
-1.6
CPT0079510001
Normal
-1.6
CPT0075170001
Normal
-1.8
CPT0001340003
Tumor
-2.0
CPT0001350001
Normal
-2.1
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0001510001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0092310003
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
