We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HNRNPAB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
199.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
198.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
171.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
160.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
155.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
151.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
149.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
147.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
142.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
136.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
130.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
130.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
127.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
126.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
123.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
122.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
121.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
121.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
119.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
118.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
118.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
118.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
118.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
117.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
117.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
116.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
115.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
114.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
112.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
111.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
111.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
110.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
107.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
105.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
104.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
103.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
103.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
102.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
101.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
101.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
101.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
100.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
100.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
100.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
99.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
99.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
98.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
98.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
97.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
95.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
95.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
95.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
95.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
95.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
94.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
94.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
94.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
94.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
94.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
93.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
93.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
93.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
93.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
93.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
92.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
92.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
92.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
92.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
91.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
91.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
91.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
90.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
90.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
90.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
90.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
90.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
90.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
90.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
89.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
89.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
88.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
88.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
88.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
87.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
87.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
86.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
86.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
86.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
86.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
85.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
85.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
85.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
85.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
84.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
84.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
84.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
84.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
83.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
83.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
83.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
83.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
83.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
83.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
82.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
82.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
81.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
80.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
80.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
79.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
79.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
78.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
78.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
78.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
78.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
78.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
77.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
77.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
77.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
76.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
76.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
76.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
76.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
76.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
75.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
75.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
75.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
75.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
74.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
74.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
74.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
74.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
73.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
73.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
73.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
73.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
73.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
73.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
73.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
73.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
72.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
72.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
72.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
72.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
72.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
72.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
72.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
71.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
71.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
71.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
71.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
71.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
70.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
70.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
70.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
70.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
70.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
70.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
70.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
70.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
70.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
69.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
69.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
68.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
68.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
68.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
68.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
68.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
67.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
67.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
67.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
67.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
67.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
67.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
67.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
67.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
66.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
66.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
66.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
65.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
65.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
65.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
64.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
64.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
64.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
64.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
63.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
63.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
63.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
63.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
63.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
63.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
63.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
62.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
62.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
62.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
61.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
61.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
61.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
61.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
61.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
61.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
60.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
60.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
60.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
60.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
60.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
60.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
59.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
59.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
59.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
58.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
58.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
58.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
58.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
58.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
58.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
58.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
58.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
58.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
58.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
57.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
57.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
57.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
57.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
57.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
57.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
56.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
56.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
56.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
56.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
56.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
56.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
56.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
56.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
55.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
55.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
55.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
55.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
55.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
55.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
55.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
54.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
54.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
54.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
54.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
54.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
54.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
54.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
54.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
53.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
53.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
53.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
53.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
53.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
52.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
52.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
52.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
51.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
51.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
51.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
51.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
51.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
51.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
51.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
51.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
51.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
50.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
50.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
50.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
50.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
50.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
50.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
49.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
49.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
49.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
49.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
49.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
48.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
48.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
48.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
47.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
47.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
47.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
47.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
47.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
47.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
47.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
47.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
46.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
46.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
45.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
45.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
45.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
44.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
44.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
43.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
43.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
43.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
43.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
43.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
43.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
43.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
42.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
42.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
42.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
42.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
42.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
42.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
41.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
41.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
41.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
40.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
40.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
40.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
40.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
40.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
39.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
39.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
39.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
39.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
38.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
38.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
38.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
38.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
37.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
37.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
37.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
37.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
37.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
36.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
36.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
36.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
35.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
34.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
34.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
34.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
34.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
33.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
33.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
33.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
32.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
32.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
31.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
31.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
29.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
29.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
29.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
29.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
29.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
27.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
27.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
27.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
26.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
25.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
23.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
23.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
20.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
20.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
16.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HNRNPAB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.2
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
189.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
158.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
150.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
140.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
138.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
133.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
125.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
125.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
122.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
122.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
121.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
118.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
118.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
117.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
115.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
112.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
110.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
108.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
108.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
106.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
106.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
105.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
105.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
104.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
103.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
101.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
99.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
99.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
99.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
99.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
97.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
97.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
96.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
95.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
95.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
94.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
94.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
94.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
92.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
92.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
91.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
91.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
91.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
90.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
90.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
89.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
89.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
89.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
88.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
87.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
85.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
85.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
85.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
85.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
84.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
83.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
82.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
81.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
80.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
80.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
80.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
80.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
79.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
79.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
79.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
78.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
78.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
77.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
77.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
77.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
77.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
76.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
75.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
75.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
74.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
74.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
74.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
74.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
74.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
74.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
74.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
74.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
74.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
72.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
72.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
72.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
71.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
71.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
71.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
71.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
71.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
70.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
70.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
70.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
69.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
69.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
69.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
69.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
69.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
68.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
68.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
68.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
68.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
67.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
67.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
67.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
67.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
67.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
67.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
66.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
66.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
65.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
65.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
65.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
65.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
64.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
64.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
64.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
64.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
64.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
64.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
63.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
63.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
63.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
62.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
62.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
62.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
62.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
62.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
62.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
61.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
61.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
61.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
61.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
61.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
60.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
60.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
60.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
60.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
60.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
60.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
59.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
59.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
58.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
58.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
58.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
58.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
58.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
57.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
57.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
56.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
56.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
56.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
55.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
55.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
55.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
55.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
54.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
54.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
54.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
54.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
54.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
53.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
53.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
53.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
53.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
52.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
52.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
52.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
52.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
51.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
51.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
51.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
51.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
50.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
50.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
49.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
49.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
49.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
48.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
48.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
48.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
48.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
48.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
47.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
47.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
46.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
46.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
46.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
46.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
46.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
45.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
45.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
45.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
44.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
44.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
44.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
43.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
43.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
43.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
43.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
42.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
42.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
42.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
41.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
41.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
40.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
40.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
39.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
39.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
39.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
39.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
38.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
38.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
38.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
36.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
36.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
36.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
36.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
35.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
35.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
35.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
34.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
31.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
31.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
31.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
29.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
29.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
28.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
26.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
26.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
865
Tumor
1.2
1013
Tumor
1.0
351
Tumor
1.0
497
Tumor
0.9
777
Tumor
0.9
557
Tumor
0.7
523
Tumor
0.7
615
Tumor
0.7
223
Tumor
0.7
285
Tumor
0.7
527
Tumor
0.7
965
Tumor
0.6
353
Tumor
0.6
983
Tumor
0.6
355
Tumor
0.6
487
Tumor
0.6
515
Tumor
0.5
785
Tumor
0.5
923
Tumor
0.5
737
Tumor
0.5
123
Tumor
0.5
411
Tumor
0.5
953
Tumor
0.5
387
Tumor
0.5
211
Tumor
0.5
627
Tumor
0.5
913
Tumor
0.4
493
Tumor
0.4
967
Tumor
0.4
535
Tumor
0.4
881
Tumor
0.4
823
Tumor
0.4
161
Tumor
0.4
647
Tumor
0.4
357
Tumor
0.4
467
Tumor
0.4
567
Tumor
0.4
267
Tumor
0.3
724
Normal
0.3
937
Tumor
0.3
461
Tumor
0.3
141
Tumor
0.3
743
Tumor
0.3
957
Tumor
0.3
427
Tumor
0.3
513
Tumor
0.3
1021
Tumor
0.3
1031
Tumor
0.3
861
Tumor
0.3
883
Tumor
0.3
813
Tumor
0.3
671
Tumor
0.3
925
Tumor
0.3
635
Tumor
0.3
455
Tumor
0.3
395
Tumor
0.3
814
Normal
0.3
977
Tumor
0.3
533
Tumor
0.3
447
Tumor
0.2
375
Tumor
0.2
423
Tumor
0.2
663
Tumor
0.2
857
Tumor
0.2
1041
Tumor
0.2
483
Tumor
0.2
313
Tumor
0.2
135
Tumor
0.2
137
Tumor
0.2
383
Tumor
0.2
443
Tumor
0.2
473
Tumor
0.2
545
Tumor
0.2
431
Tumor
0.2
277
Tumor
0.2
261
Tumor
0.2
563
Tumor
0.2
413
Tumor
0.2
951
Tumor
0.2
331
Tumor
0.2
661
Tumor
0.2
385
Tumor
0.2
877
Tumor
0.2
943
Tumor
0.2
697
Tumor
0.2
963
Tumor
0.2
617
Tumor
0.2
863
Tumor
0.1
665
Tumor
0.1
817
Tumor
0.1
873
Tumor
0.1
491
Tumor
0.1
471
Tumor
0.1
1025
Tumor
0.1
227
Tumor
0.1
213
Tumor
0.1
695
Tumor
0.1
131
Tumor
0.1
433
Tumor
0.1
498
Normal
0.1
525
Tumor
0.1
641
Tumor
0.1
465
Tumor
0.1
815
Tumor
0.1
755
Tumor
0.1
492
Normal
0.1
537
Tumor
0.1
327
Tumor
0.0
1027
Tumor
0.0
851
Tumor
0.0
571
Tumor
0.0
727
Tumor
0.0
481
Tumor
0.0
685
Tumor
0.0
341
Tumor
0.0
911
Tumor
0.0
915
Tumor
0.0
536
Normal
0.0
367
Tumor
0.0
187
Tumor
0.0
445
Tumor
0.0
975
Tumor
0.0
363
Tumor
0.0
966
Normal
0.0
955
Tumor
0.0
721
Tumor
0.0
221
Tumor
0.0
538
Normal
0.0
185
Tumor
0.0
524
Normal
0.0
517
Tumor
0.0
257
Tumor
0.0
415
Tumor
0.0
283
Tumor
0.0
365
Tumor
-0.1
921
Tumor
-0.1
553
Tumor
-0.1
916
Normal
-0.1
297
Tumor
-0.1
867
Tumor
-0.1
147
Tumor
-0.1
573
Tumor
-0.1
478
Normal
-0.1
145
Tumor
-0.1
311
Tumor
-0.1
715
Tumor
-0.1
391
Tumor
-0.1
1045
Tumor
-0.1
878
Normal
-0.1
554
Normal
-0.1
1026
Normal
-0.1
484
Normal
-0.1
924
Normal
-0.1
472
Normal
-0.1
482
Normal
-0.1
284
Normal
-0.1
713
Tumor
-0.1
1028
Normal
-0.1
412
Normal
-0.2
954
Normal
-0.2
616
Normal
-0.2
1014
Normal
-0.2
425
Tumor
-0.2
488
Normal
-0.2
477
Tumor
-0.2
212
Normal
-0.2
231
Tumor
-0.2
328
Normal
-0.2
1043
Tumor
-0.2
978
Normal
-0.2
444
Normal
-0.2
884
Normal
-0.2
864
Normal
-0.2
224
Normal
-0.2
142
Normal
-0.2
912
Normal
-0.2
852
Normal
-0.2
462
Normal
-0.2
628
Normal
-0.2
944
Normal
-0.2
448
Normal
-0.2
958
Normal
-0.2
866
Normal
-0.2
268
Normal
-0.2
451
Tumor
-0.2
434
Normal
-0.2
756
Normal
-0.2
1022
Normal
-0.2
494
Normal
-0.2
516
Normal
-0.2
298
Normal
-0.2
716
Normal
-0.2
786
Normal
-0.2
113
Tumor
-0.2
191
Tumor
-0.2
696
Normal
-0.2
714
Normal
-0.2
534
Normal
-0.2
518
Normal
-0.2
1044
Normal
-0.2
746
Normal
-0.2
922
Normal
-0.2
917
Tumor
-0.2
358
Normal
-0.2
546
Normal
-0.2
228
Normal
-0.2
882
Normal
-0.2
938
Normal
-0.2
125
Tumor
-0.2
343
Tumor
-0.2
558
Normal
-0.2
858
Normal
-0.2
968
Normal
-0.2
112
Tumor
-0.3
474
Normal
-0.3
686
Normal
-0.3
914
Normal
-0.3
416
Normal
-0.3
744
Normal
-0.3
195
Tumor
-0.3
1042
Normal
-0.3
361
Tumor
-0.3
572
Normal
-0.3
964
Normal
-0.3
344
Normal
-0.3
435
Tumor
-0.3
466
Normal
-0.3
698
Normal
-0.3
271
Tumor
-0.3
171
Tumor
-0.3
127
Tumor
-0.3
364
Normal
-0.3
356
Normal
-0.3
1016
Normal
-0.3
874
Normal
-0.3
1032
Normal
-0.3
862
Normal
-0.3
1046
Normal
-0.3
384
Normal
-0.3
984
Normal
-0.3
745
Tumor
-0.3
286
Normal
-0.3
976
Normal
-0.3
956
Normal
-0.3
393
Tumor
-0.3
926
Normal
-0.3
918
Normal
-0.3
778
Normal
-0.3
111
Normal
-0.3
342
Normal
-0.3
217
Tumor
-0.3
982
Normal
-0.3
352
Normal
-0.3
421
Tumor
-0.3
868
Normal
-0.3
314
Normal
-0.3
664
Normal
-0.3
426
Normal
-0.3
816
Normal
-0.3
262
Normal
-0.3
422
Normal
-0.3
952
Normal
-0.3
738
Normal
-0.3
728
Normal
-0.3
463
Tumor
-0.3
376
Normal
-0.3
528
Normal
-0.3
362
Normal
-0.3
468
Normal
-0.4
981
Tumor
-0.4
146
Normal
-0.4
114
Normal
-0.4
824
Normal
-0.4
723
Tumor
-0.4
1015
Tumor
-0.4
428
Normal
-0.4
742
Normal
-0.4
126
Normal
-0.4
672
Normal
-0.4
648
Normal
-0.4
172
Normal
-0.4
188
Normal
-0.4
456
Normal
-0.4
278
Normal
-0.4
366
Normal
-0.4
436
Normal
-0.4
394
Normal
-0.4
722
Normal
-0.4
424
Normal
-0.4
526
Normal
-0.4
272
Normal
-0.4
666
Normal
-0.4
124
Normal
-0.4
332
Normal
-0.4
741
Tumor
-0.4
128
Normal
-0.4
568
Normal
-0.4
386
Normal
-0.4
148
Normal
-0.4
662
Normal
-0.4
138
Normal
-0.4
192
Normal
-0.4
414
Normal
-0.4
464
Normal
-0.4
388
Normal
-0.4
222
Normal
-0.4
818
Normal
-0.4
368
Normal
-0.5
258
Normal
-0.5
514
Normal
-0.5
312
Normal
-0.5
574
Normal
-0.5
214
Normal
-0.5
136
Normal
-0.5
432
Normal
-0.5
232
Normal
-0.5
636
Normal
-0.5
564
Normal
-0.5
392
Normal
-0.5
218
Normal
-0.5
446
Normal
-0.5
354
Normal
-0.5
618
Normal
-0.5
396
Normal
-0.5
132
Normal
-0.5
162
Normal
-0.5
642
Normal
-0.6
452
Normal
-0.6
186
Normal
-0.6
196
Normal
-0.6
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.