HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:13.4 nTPM
HPA Brain:58.4 nTPM
GTEx:13.4 nTPM
FANTOM5:69.5 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:24.3 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026114Antibody HPA051524Antibody CAB002756
Glial cells Not detectedMediumLow
Neuronal cells LowMediumLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 58.4
Sample id Sample description nTPM
Hippocampus
nTPM: 54.3
2621 Female, age 67, right hemisphere 65.2
1855 Male, age 76, left hemisphere 58.5
1898 Male, age 80, left hemisphere 54.8
2148 Female, age 91, left hemisphere 53.1
1911 Female, age 85, right hemisphere 49.4
2529 Female, age 94, left hemisphere 44.6
Dentate gyrus
nTPM: 50.3
1927 Female, age 91, both hemispheres 65.6
2531 Female, age 67, both hemispheres 53.7
2528 Male, age 74, both hemispheres 48.9
2246 Female, age 85, both hemispheres 45.6
2010 Male, age 76, both hemispheres 45.1
2530 Female, age 94, left hemisphere 43.0
Entorhinal gyrus
nTPM: 47.8
2613 Female, age 94, left hemisphere 56.3
2764 Male, age 80, right hemisphere 52.3
1938 Female, age 85, left hemisphere 47.7
1787 Male, age 76, left hemisphere 47.4
2117 Female, age 91, right hemisphere 42.4
2686 Male, age 75, right hemisphere 40.9
Hippocampus, CA1
nTPM: 58.4
2749 Male, age 80, left hemisphere 87.4
2527 Male, age 74, both hemispheres 65.3
2082 Female, age 91, right hemisphere 49.5
1873 Female, age 85, both hemispheres 47.5
2045 Male, age 76, both hemispheres 42.3
Hippocampus, CA2
nTPM: 50.3
1963 Male, age 80, left hemisphere 71.4
2113 Female, age 91, right hemisphere 53.0
1892 Male, age 76, both hemispheres 45.7
2249 Male, age 74, both hemispheres 44.8
1940 Female, age 85, left hemisphere 44.1
2437 Female, age 94, left hemisphere 43.0
Hippocampus, CA3
nTPM: 56.2
2137 Male, age 80, left hemisphere 83.9
2436 Male, age 74, both hemispheres 64.2
2861 Female, age 67, both hemispheres 59.2
2620 Female, age 94, left hemisphere 52.0
1867 Male, age 76, both hemispheres 40.1
1891 Female, age 85, both hemispheres 37.6
Parahippocampal cortex
nTPM: 49.9
2245 Female, age 91, both hemispheres 67.8
1850 Male, age 80, both hemispheres 52.2
1933 Female, age 85, both hemispheres 52.1
2250 Female, age 67, right hemisphere 50.2
2018 Male, age 76, both hemispheres 49.0
2532 Female, age 72, left hemisphere 46.4
2622 Female, age 67, right hemisphere 46.4
1990 Female, age 91, right hemisphere 45.7
2693 Female, age 94, both hemispheres 44.9
2692 Male, age 74, both hemispheres 43.9
Perirhinal gyrus
nTPM: 58.4
1847 Female, age 91, left hemisphere 67.7
2521 Female, age 94, right hemisphere 62.9
1794 Male, age 80, right hemisphere 60.6
1841 Female, age 85, right hemisphere 53.2
2848 Male, age 76, right hemisphere 47.5
Subiculum
nTPM: 42.6
1901 Male, age 80, both hemispheres 47.5
2042 Male, age 76, both hemispheres 44.7
2729 Female, age 91, right hemisphere 43.1
2619 Male, age 74, both hemispheres 42.8
1977 Female, age 85, both hemispheres 42.5
2438 Female, age 94, left hemisphere 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.4
Samples: 197

Max nTPM: 38.0
Min nTPM: 4.7
Std nTPM: 6.0
Median nTPM: 12.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 34.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 31.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 28.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 28.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 27.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 27.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 26.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 26.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 26.5
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 26.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 69.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.5
FF:10153-102I9 76 years, female 78.9
FF:10169-103B7 60 years, female 60.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.5
Pig sample Sample description nTPM
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 32.6
Min nTPM: 19.5
Sample A Female 32.6
Sample B Female 21.2
Sample C Male 24.4
Sample D Male 19.5
Dorsal hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 29.9
Min nTPM: 20.6
Sample A Female 29.9
Sample B Female 29.1
Sample C Male 20.6
Sample D Male 20.6
Entorhinal cortex
nTPM: 28.5
Samples: 4

Max nTPM: 31.3
Min nTPM: 25.5
Sample A Female 31.3
Sample B Female 25.5
Sample C Male 31.3
Sample D Male 25.9
Ventral hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 19.7
Sample A Female 24.5
Sample B Female 19.7
Sample C Male 32.0
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 31.0
Min nTPM: 20.5
Sample A Male 23.4
Sample B Male 22.1
Sample C Female 20.5
Sample D Female 31.0
Hippocampal formation
nTPM: 21.1
Samples: 4

Max nTPM: 28.8
Min nTPM: 15.2
Sample A Male 15.2
Sample B Male 24.1
Sample C Female 28.8
Sample D Female 16.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
69734971 Antisense, RP_050503_01_G10, Mouse strain C57BL/6J (56 days, male) 4.0

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