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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
52.1
nTPM
HPA Brain:
99.0
nTPM
GTEx:
52.1
nTPM
FANTOM5:
31.2
Scaled Tags Per Million
Pig:
46.2
nTPM
Mouse:
68.6
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
99.0
Sample id
Sample description
nTPM
Amygdala nTPM: 84.5
2814
Male, age 76, right hemisphere
107.5
2517
Female, age 94, left hemisphere
83.0
1987
Female, age 91, left hemisphere
78.6
2695
Female, age 67, right hemisphere
77.4
2514
Male, age 75, right hemisphere
76.1
Basal amygdala nTPM: 95.7
2827
Female, age 67, right hemisphere
110.0
2685
Female, age 94, left hemisphere
100.9
1955
Male, age 76, both hemispheres
92.7
2609
Male, age 75, right hemisphere
91.0
2243
Female, age 91, right hemisphere
90.3
2110
Male, age 80, left hemisphere
89.4
Central amygdala nTPM: 96.6
1905
Male, age 76, both hemispheres
116.3
2826
Female, age 94, left hemisphere
105.6
2239
Male, age 80, left hemisphere
100.4
2515
Male, age 75, right hemisphere
89.6
2701
Female, age 91, right hemisphere
71.3
Corticomedial amygdala nTPM: 88.7
2535
Female, age 67, right hemisphere
120.3
2829
Male, age 80, left hemisphere
98.4
2429
Female, age 94, left hemisphere
88.0
2428
Male, age 75, right hemisphere
77.2
2242
Female, age 91, right hemisphere
75.2
2240
Male, age 76, both hemispheres
73.0
Lateral amygdala nTPM: 99.0
2256
Male, age 80, left hemisphere
113.7
2534
Female, age 94, left hemisphere
107.5
1883
Male, age 76, both hemispheres
105.5
2255
Female, age 91, right hemisphere
91.6
2516
Male, age 75, right hemisphere
88.7
2830
Female, age 67, right hemisphere
86.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 52.1
Samples: 152
Max nTPM: 104.4
Min nTPM: 9.0
Std nTPM: 17.5
Median nTPM: 51.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
104.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
100.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
96.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
93.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
90.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
85.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
84.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
83.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
82.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
82.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
79.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
78.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
78.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
77.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
76.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
75.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
73.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
72.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
71.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
71.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
70.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
70.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
70.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
69.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
69.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
69.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
68.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
67.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
66.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
66.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
65.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
65.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
65.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
64.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
63.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
63.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
62.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
62.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
61.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
61.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
61.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
60.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
60.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
60.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
60.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
60.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
59.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
59.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
59.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
59.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
57.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
57.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
57.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
57.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
57.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
57.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
57.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
56.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
56.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
56.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
55.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
55.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
55.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
55.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
55.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
54.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
54.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
54.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
54.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
54.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
53.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
52.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
52.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
51.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
51.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
51.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
51.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
50.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
50.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
50.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
49.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
49.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
49.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
49.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
48.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
47.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
47.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
46.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
46.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
46.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
46.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
45.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
45.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
44.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
44.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
44.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
44.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
43.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
43.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
43.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
43.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
42.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
42.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
42.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
41.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
41.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
41.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
40.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
40.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
40.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
39.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
39.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
37.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
36.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
36.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
36.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
36.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
36.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
35.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
35.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
35.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
34.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
34.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
34.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
33.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
33.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
33.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
33.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
32.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
32.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
32.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
31.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
31.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
30.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
30.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
30.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
30.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
30.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
29.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
28.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
27.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
27.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
24.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
24.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
23.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
15.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
14.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
9.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.