HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Not detected
Synapses: Medium
RNA expressioni
Consensus:30.0 nTPM
HPA Brain:99.5 nTPM
GTEx:30.0 nTPM
FANTOM5:193.2 Scaled Tags Per Million
Pig:109.1 nTPM
Mouse:75.0 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA038373
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Not detected
Synapses Medium

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038373
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 99.5
Sample id Sample description nTPM
Hippocampus
nTPM: 82.3
2621 Female, age 67, right hemisphere 110.6
1911 Female, age 85, right hemisphere 89.8
2148 Female, age 91, left hemisphere 85.5
1855 Male, age 76, left hemisphere 81.9
1898 Male, age 80, left hemisphere 68.2
2529 Female, age 94, left hemisphere 57.9
Dentate gyrus
nTPM: 75.1
2531 Female, age 67, both hemispheres 102.0
1927 Female, age 91, both hemispheres 87.3
2246 Female, age 85, both hemispheres 77.6
2010 Male, age 76, both hemispheres 66.9
2530 Female, age 94, left hemisphere 64.0
2528 Male, age 74, both hemispheres 52.7
Entorhinal gyrus
nTPM: 65.8
2613 Female, age 94, left hemisphere 97.6
1787 Male, age 76, left hemisphere 75.8
1938 Female, age 85, left hemisphere 60.6
2764 Male, age 80, right hemisphere 59.7
2686 Male, age 75, right hemisphere 59.0
2117 Female, age 91, right hemisphere 42.3
Hippocampus, CA1
nTPM: 95.1
2749 Male, age 80, left hemisphere 168.9
2527 Male, age 74, both hemispheres 82.8
2045 Male, age 76, both hemispheres 80.7
1873 Female, age 85, both hemispheres 79.5
2082 Female, age 91, right hemisphere 63.7
Hippocampus, CA2
nTPM: 65.8
1963 Male, age 80, left hemisphere 82.7
1892 Male, age 76, both hemispheres 80.9
2113 Female, age 91, right hemisphere 65.6
2249 Male, age 74, both hemispheres 60.9
2437 Female, age 94, left hemisphere 59.2
1940 Female, age 85, left hemisphere 45.7
Hippocampus, CA3
nTPM: 99.5
2137 Male, age 80, left hemisphere 163.5
2861 Female, age 67, both hemispheres 115.9
2620 Female, age 94, left hemisphere 115.8
1867 Male, age 76, both hemispheres 75.9
2436 Male, age 74, both hemispheres 69.0
1891 Female, age 85, both hemispheres 56.9
Parahippocampal cortex
nTPM: 66.0
2245 Female, age 91, both hemispheres 109.6
2693 Female, age 94, both hemispheres 78.1
2250 Female, age 67, right hemisphere 74.0
2622 Female, age 67, right hemisphere 70.6
1933 Female, age 85, both hemispheres 61.0
1850 Male, age 80, both hemispheres 56.5
2018 Male, age 76, both hemispheres 55.0
2692 Male, age 74, both hemispheres 52.5
2532 Female, age 72, left hemisphere 52.4
1990 Female, age 91, right hemisphere 50.4
Perirhinal gyrus
nTPM: 68.8
2521 Female, age 94, right hemisphere 86.7
1847 Female, age 91, left hemisphere 74.4
2848 Male, age 76, right hemisphere 66.7
1794 Male, age 80, right hemisphere 60.3
1841 Female, age 85, right hemisphere 56.0
Subiculum
nTPM: 61.2
1901 Male, age 80, both hemispheres 81.7
2042 Male, age 76, both hemispheres 67.5
2438 Female, age 94, left hemisphere 58.9
1977 Female, age 85, both hemispheres 57.3
2619 Male, age 74, both hemispheres 53.8
2729 Female, age 91, right hemisphere 48.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 86.6
Min nTPM: 3.4
Std nTPM: 17.3
Median nTPM: 28.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 86.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 82.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 74.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 68.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 67.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 66.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 66.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 65.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 61.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 61.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 193.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 193.2
FF:10169-103B7 60 years, female 246.1
FF:10153-102I9 76 years, female 140.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 109.1
Pig sample Sample description nTPM
Subiculum
nTPM: 92.1
Samples: 4

Max nTPM: 116.9
Min nTPM: 75.1
Sample A Female 116.9
Sample B Female 83.8
Sample C Male 92.7
Sample D Male 75.1
Dorsal hippocampus
nTPM: 94.1
Samples: 4

Max nTPM: 112.1
Min nTPM: 70.7
Sample A Female 112.1
Sample B Female 110.7
Sample C Male 70.7
Sample D Male 83.0
Entorhinal cortex
nTPM: 109.1
Samples: 4

Max nTPM: 133.1
Min nTPM: 90.4
Sample A Female 115.3
Sample B Female 90.4
Sample C Male 133.1
Sample D Male 97.5
Ventral hippocampus
nTPM: 93.6
Samples: 4

Max nTPM: 132.4
Min nTPM: 66.9
Sample A Female 66.9
Sample B Female 72.8
Sample C Male 102.1
Sample D Male 132.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 75.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.0
Samples: 4

Max nTPM: 96.4
Min nTPM: 65.7
Sample A Male 69.5
Sample B Male 68.2
Sample C Female 65.7
Sample D Female 96.4
Hippocampal formation
nTPM: 70.6
Samples: 4

Max nTPM: 78.0
Min nTPM: 62.7
Sample A Male 65.3
Sample B Male 76.5
Sample C Female 78.0
Sample D Female 62.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
71020897 Antisense, RP_050512_03_H06, Mouse strain C57BL/6J (56 days, male) 17.4

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