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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIAA1671 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
86.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
43.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
33.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
32.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
31.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
30.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
30.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
29.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
28.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
27.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
27.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
27.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
25.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
25.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
25.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
23.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
23.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
22.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
22.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
21.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
21.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
20.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
20.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
20.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
20.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
20.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
19.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
19.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
18.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
18.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
17.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
17.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
17.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
17.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
17.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
17.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
17.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
17.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
16.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
16.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
16.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
16.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
16.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
16.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
16.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
16.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
15.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
15.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
14.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
14.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
14.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
14.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
14.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
14.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
13.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
13.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
13.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
13.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
13.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
12.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
12.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
12.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
12.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
12.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
12.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
12.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
11.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
11.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
11.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
11.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
11.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
10.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
9.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
9.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
9.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
8.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
8.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
7.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
7.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
7.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
6.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
6.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
6.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
6.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
5.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
5.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
5.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
4.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
4.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
4.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
4.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
4.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
4.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
3.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
3.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
3.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
3.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
2.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIAA1671 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.4
Number of samples
231
Samples
Sample
Description
TPM
DO45159
0 years, male, NA, stage:3, alive, 1470 days
23.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
23.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
19.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
17.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
16.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
11.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
11.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
11.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
9.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
9.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
9.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
8.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
8.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
8.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
8.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
8.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
8.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
7.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
7.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
7.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
7.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
6.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
6.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
6.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
6.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
5.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
5.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
5.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
5.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
5.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
5.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
5.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
5.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
5.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
4.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
4.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
3.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
3.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
3.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
3.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
3.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
3.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
3.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
3.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
2.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
2.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
2.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
2.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
2.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
2.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
2.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
2.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
2.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
2.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
2.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
2.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
2.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
2.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
2.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
2.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
1.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
1.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
443
Tumor
1.0
425
Tumor
0.7
533
Tumor
0.7
1025
Tumor
0.6
937
Tumor
0.6
395
Tumor
0.6
617
Tumor
0.6
525
Tumor
0.5
737
Tumor
0.5
445
Tumor
0.5
221
Tumor
0.5
967
Tumor
0.4
341
Tumor
0.4
515
Tumor
0.4
913
Tumor
0.4
477
Tumor
0.4
1021
Tumor
0.4
487
Tumor
0.4
925
Tumor
0.4
137
Tumor
0.4
921
Tumor
0.4
777
Tumor
0.4
331
Tumor
0.4
513
Tumor
0.4
465
Tumor
0.4
958
Normal
0.4
756
Normal
0.3
327
Tumor
0.3
865
Tumor
0.3
311
Tumor
0.3
484
Normal
0.3
481
Tumor
0.3
436
Normal
0.3
636
Normal
0.3
786
Normal
0.3
627
Tumor
0.3
1014
Normal
0.3
514
Normal
0.3
554
Normal
0.3
545
Tumor
0.3
642
Normal
0.3
968
Normal
0.3
778
Normal
0.3
616
Normal
0.3
527
Tumor
0.3
444
Normal
0.3
873
Tumor
0.3
714
Normal
0.3
526
Normal
0.3
964
Normal
0.3
742
Normal
0.3
635
Tumor
0.3
666
Normal
0.2
983
Tumor
0.2
1028
Normal
0.2
696
Normal
0.2
686
Normal
0.2
416
Normal
0.2
647
Tumor
0.2
868
Normal
0.2
223
Tumor
0.2
918
Normal
0.2
922
Normal
0.2
1022
Normal
0.2
628
Normal
0.2
483
Tumor
0.2
664
Normal
0.2
358
Normal
0.2
1026
Normal
0.2
538
Normal
0.2
415
Tumor
0.2
498
Normal
0.2
618
Normal
0.2
862
Normal
0.2
955
Tumor
0.2
755
Tumor
0.2
982
Normal
0.2
954
Normal
0.2
883
Tumor
0.2
648
Normal
0.2
878
Normal
0.2
785
Tumor
0.2
926
Normal
0.2
1046
Normal
0.2
863
Tumor
0.2
518
Normal
0.2
957
Tumor
0.2
866
Normal
0.2
488
Normal
0.2
482
Normal
0.2
746
Normal
0.2
277
Tumor
0.2
723
Tumor
0.2
528
Normal
0.2
916
Normal
0.2
516
Normal
0.2
568
Normal
0.2
546
Normal
0.2
455
Tumor
0.2
472
Normal
0.2
286
Normal
0.2
938
Normal
0.2
911
Tumor
0.2
462
Normal
0.2
112
Tumor
0.2
433
Tumor
0.2
132
Normal
0.2
944
Normal
0.2
446
Normal
0.2
728
Normal
0.2
1045
Tumor
0.2
534
Normal
0.2
572
Normal
0.2
494
Normal
0.2
951
Tumor
0.2
1031
Tumor
0.2
524
Normal
0.2
984
Normal
0.2
571
Tumor
0.2
268
Normal
0.2
884
Normal
0.2
558
Normal
0.1
716
Normal
0.1
698
Normal
0.1
342
Normal
0.1
357
Tumor
0.1
976
Normal
0.1
882
Normal
0.1
356
Normal
0.1
874
Normal
0.1
427
Tumor
0.1
1016
Normal
0.1
412
Normal
0.1
186
Normal
0.1
218
Normal
0.1
924
Normal
0.1
1032
Normal
0.1
912
Normal
0.1
232
Normal
0.1
421
Tumor
0.1
228
Normal
0.1
858
Normal
0.1
966
Normal
0.1
978
Normal
0.1
497
Tumor
0.1
721
Tumor
0.1
864
Normal
0.1
426
Normal
0.1
142
Normal
0.1
917
Tumor
0.1
975
Tumor
0.1
981
Tumor
0.1
1042
Normal
0.1
354
Normal
0.1
114
Normal
0.1
452
Normal
0.1
185
Tumor
0.1
364
Normal
0.1
363
Tumor
0.1
492
Normal
0.1
1044
Normal
0.1
672
Normal
0.1
564
Normal
0.1
722
Normal
0.1
738
Normal
0.1
344
Normal
0.1
478
Normal
0.1
298
Normal
0.1
662
Normal
0.1
463
Tumor
0.1
432
Normal
0.1
952
Normal
0.1
284
Normal
0.1
695
Tumor
0.1
353
Tumor
0.1
857
Tumor
0.1
385
Tumor
0.1
258
Normal
0.1
461
Tumor
0.1
468
Normal
0.1
823
Tumor
0.1
473
Tumor
0.0
384
Normal
0.0
278
Normal
0.0
267
Tumor
0.0
352
Normal
0.0
464
Normal
0.0
474
Normal
0.0
172
Normal
0.0
1041
Tumor
0.0
448
Normal
0.0
852
Normal
0.0
138
Normal
0.0
745
Tumor
0.0
148
Normal
0.0
312
Normal
0.0
162
Normal
0.0
428
Normal
0.0
744
Normal
0.0
466
Normal
0.0
956
Normal
0.0
574
Normal
0.0
111
Normal
0.0
396
Normal
0.0
424
Normal
0.0
881
Tumor
0.0
563
Tumor
0.0
222
Normal
0.0
923
Tumor
0.0
471
Tumor
0.0
376
Normal
0.0
413
Tumor
0.0
953
Tumor
0.0
147
Tumor
0.0
423
Tumor
0.0
965
Tumor
0.0
272
Normal
0.0
196
Normal
0.0
414
Normal
0.0
914
Normal
0.0
392
Normal
0.0
824
Normal
0.0
145
Tumor
0.0
434
Normal
0.0
328
Normal
0.0
422
Normal
0.0
113
Tumor
0.0
212
Normal
0.0
467
Tumor
0.0
187
Tumor
0.0
188
Normal
0.0
523
Tumor
0.0
537
Tumor
0.0
727
Tumor
0.0
128
Normal
0.0
262
Normal
-0.1
368
Normal
-0.1
214
Normal
-0.1
867
Tumor
-0.1
456
Normal
-0.1
536
Normal
-0.1
355
Tumor
-0.1
332
Normal
-0.1
386
Normal
-0.1
365
Tumor
-0.1
146
Normal
-0.1
285
Tumor
-0.1
615
Tumor
-0.1
127
Tumor
-0.1
713
Tumor
-0.1
818
Normal
-0.1
567
Tumor
-0.1
217
Tumor
-0.1
314
Normal
-0.1
641
Tumor
-0.1
136
Normal
-0.1
192
Normal
-0.1
195
Tumor
-0.1
685
Tumor
-0.1
383
Tumor
-0.1
224
Normal
-0.1
851
Tumor
-0.1
388
Normal
-0.1
367
Tumor
-0.1
362
Normal
-0.1
493
Tumor
-0.1
671
Tumor
-0.1
697
Tumor
-0.1
124
Normal
-0.1
557
Tumor
-0.1
313
Tumor
-0.1
1015
Tumor
-0.1
213
Tumor
-0.1
915
Tumor
-0.2
391
Tumor
-0.2
191
Tumor
-0.2
387
Tumor
-0.2
816
Normal
-0.2
431
Tumor
-0.2
126
Normal
-0.2
394
Normal
-0.2
366
Normal
-0.2
814
Normal
-0.2
447
Tumor
-0.2
1043
Tumor
-0.2
271
Tumor
-0.2
141
Tumor
-0.2
131
Tumor
-0.2
663
Tumor
-0.2
517
Tumor
-0.2
135
Tumor
-0.2
943
Tumor
-0.2
743
Tumor
-0.2
261
Tumor
-0.3
393
Tumor
-0.3
665
Tumor
-0.3
161
Tumor
-0.3
231
Tumor
-0.3
171
Tumor
-0.3
535
Tumor
-0.3
1027
Tumor
-0.3
297
Tumor
-0.3
573
Tumor
-0.3
877
Tumor
-0.3
815
Tumor
-0.3
977
Tumor
-0.3
343
Tumor
-0.3
351
Tumor
-0.3
813
Tumor
-0.4
553
Tumor
-0.4
963
Tumor
-0.4
724
Normal
-0.4
741
Tumor
-0.4
123
Tumor
-0.4
1013
Tumor
-0.4
817
Tumor
-0.4
375
Tumor
-0.4
861
Tumor
-0.4
211
Tumor
-0.5
661
Tumor
-0.5
491
Tumor
-0.5
435
Tumor
-0.5
411
Tumor
-0.5
257
Tumor
-0.5
451
Tumor
-0.6
715
Tumor
-0.6
361
Tumor
-0.6
125
Tumor
-0.8
227
Tumor
-0.8
283
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
