HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:29.8 nTPM
HPA Brain:48.5 nTPM
GTEx:29.8 nTPM
FANTOM5:71.6 Scaled Tags Per Million
Pig:59.5 nTPM
Mouse:87.2 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053588
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 41.6
1898 Male, age 80, left hemisphere 46.9
1911 Female, age 85, right hemisphere 42.4
2621 Female, age 67, right hemisphere 42.0
2529 Female, age 94, left hemisphere 40.8
1855 Male, age 76, left hemisphere 39.4
2148 Female, age 91, left hemisphere 38.2
Dentate gyrus
nTPM: 36.4
2010 Male, age 76, both hemispheres 42.4
2246 Female, age 85, both hemispheres 41.9
1927 Female, age 91, both hemispheres 41.3
2530 Female, age 94, left hemisphere 34.4
2528 Male, age 74, both hemispheres 30.7
2531 Female, age 67, both hemispheres 27.8
Entorhinal gyrus
nTPM: 38.5
1787 Male, age 76, left hemisphere 49.3
1938 Female, age 85, left hemisphere 44.5
2613 Female, age 94, left hemisphere 36.1
2117 Female, age 91, right hemisphere 34.9
2764 Male, age 80, right hemisphere 33.8
2686 Male, age 75, right hemisphere 32.4
Hippocampus, CA1
nTPM: 41.5
2045 Male, age 76, both hemispheres 52.3
2749 Male, age 80, left hemisphere 46.9
1873 Female, age 85, both hemispheres 38.3
2527 Male, age 74, both hemispheres 36.5
2082 Female, age 91, right hemisphere 33.7
Hippocampus, CA2
nTPM: 39.8
1892 Male, age 76, both hemispheres 48.2
1940 Female, age 85, left hemisphere 46.5
2249 Male, age 74, both hemispheres 40.7
1963 Male, age 80, left hemisphere 35.9
2113 Female, age 91, right hemisphere 35.4
2437 Female, age 94, left hemisphere 31.9
Hippocampus, CA3
nTPM: 40.8
1867 Male, age 76, both hemispheres 53.4
2436 Male, age 74, both hemispheres 48.1
2137 Male, age 80, left hemisphere 43.6
1891 Female, age 85, both hemispheres 42.8
2620 Female, age 94, left hemisphere 28.4
2861 Female, age 67, both hemispheres 28.4
Parahippocampal cortex
nTPM: 40.2
1850 Male, age 80, both hemispheres 49.3
2250 Female, age 67, right hemisphere 46.9
2018 Male, age 76, both hemispheres 45.4
1933 Female, age 85, both hemispheres 44.7
2693 Female, age 94, both hemispheres 40.2
1990 Female, age 91, right hemisphere 39.7
2245 Female, age 91, both hemispheres 37.6
2532 Female, age 72, left hemisphere 35.5
2622 Female, age 67, right hemisphere 34.1
2692 Male, age 74, both hemispheres 29.0
Perirhinal gyrus
nTPM: 48.5
1847 Female, age 91, left hemisphere 51.2
1841 Female, age 85, right hemisphere 50.6
1794 Male, age 80, right hemisphere 48.6
2848 Male, age 76, right hemisphere 47.1
2521 Female, age 94, right hemisphere 45.1
Subiculum
nTPM: 38.1
1977 Female, age 85, both hemispheres 43.2
2729 Female, age 91, right hemisphere 41.1
2438 Female, age 94, left hemisphere 37.7
1901 Male, age 80, both hemispheres 37.5
2042 Male, age 76, both hemispheres 35.1
2619 Male, age 74, both hemispheres 33.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.8
Samples: 197

Max nTPM: 75.6
Min nTPM: 13.8
Std nTPM: 9.3
Median nTPM: 28.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 57.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 56.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 53.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 51.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 49.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 46.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 46.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 46.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 46.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 44.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 71.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.6
FF:10153-102I9 76 years, female 73.6
FF:10169-103B7 60 years, female 69.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 59.5
Pig sample Sample description nTPM
Subiculum
nTPM: 44.9
Samples: 4

Max nTPM: 59.6
Min nTPM: 34.7
Sample A Female 59.6
Sample B Female 45.2
Sample C Male 34.7
Sample D Male 40.1
Dorsal hippocampus
nTPM: 48.6
Samples: 4

Max nTPM: 56.5
Min nTPM: 38.3
Sample A Female 56.5
Sample B Female 47.3
Sample C Male 52.1
Sample D Male 38.3
Entorhinal cortex
nTPM: 59.5
Samples: 4

Max nTPM: 79.0
Min nTPM: 44.4
Sample A Female 53.1
Sample B Female 79.0
Sample C Male 61.4
Sample D Male 44.4
Ventral hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 41.8
Min nTPM: 40.1
Sample A Female 41.0
Sample B Female 40.4
Sample C Male 41.8
Sample D Male 40.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 87.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.2
Samples: 4

Max nTPM: 91.7
Min nTPM: 83.6
Sample A Male 85.6
Sample B Male 91.7
Sample C Female 87.7
Sample D Female 83.6
Hippocampal formation
nTPM: 83.1
Samples: 4

Max nTPM: 89.9
Min nTPM: 76.6
Sample A Male 89.9
Sample B Male 81.6
Sample C Female 84.1
Sample D Female 76.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69838751 Antisense, RP_050321_04_F06, Mouse strain C57BL/6J (56 days, male) 2.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org