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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR45 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
94.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
89.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
84.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
84.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
81.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
79.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
78.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
78.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
77.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
77.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
73.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
73.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
72.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
72.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
71.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
70.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
70.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
70.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
70.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
70.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
69.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
68.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
68.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
67.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
67.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
67.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
66.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
66.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
65.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
64.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
63.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
63.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
63.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
62.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
62.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
61.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
61.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
61.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
60.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
60.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
59.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
58.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
58.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
57.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
57.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
57.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
57.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
57.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
57.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
56.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
56.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
56.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
56.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
56.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
56.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
56.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
55.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
55.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
55.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
55.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
55.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
53.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
53.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
53.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
53.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
53.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
53.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
52.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
52.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
52.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
51.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
51.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
51.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
51.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
51.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
50.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
50.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
50.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
50.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
50.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
50.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
50.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
50.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
50.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
50.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
50.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
50.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
49.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
49.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
49.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
49.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
49.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
49.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
48.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
48.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
48.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
48.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
48.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
48.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
47.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
47.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
47.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
47.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
47.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
47.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
46.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
46.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
46.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
46.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
46.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
46.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
46.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
46.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
46.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
45.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
45.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
45.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
45.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
45.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
45.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
45.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
45.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
44.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
44.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
44.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
44.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
44.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
43.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
43.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
43.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
43.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
43.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
43.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
43.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
43.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
43.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
43.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
42.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
42.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
42.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
42.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
42.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
42.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
42.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
42.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
42.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
42.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
42.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
42.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
41.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
41.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
41.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
41.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
41.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
41.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
41.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
40.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
40.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
40.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
40.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
40.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
40.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
40.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
40.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
40.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
40.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
40.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
40.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
40.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
40.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
40.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
39.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
39.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
39.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
39.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
39.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
39.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
39.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
39.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
39.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
39.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
39.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
39.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
38.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
38.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
38.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
38.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
38.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
38.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
38.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
38.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
37.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
37.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
37.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
37.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
37.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
37.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
37.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
37.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
37.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
37.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
37.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
36.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
36.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
36.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
36.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
36.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
36.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
36.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
36.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
36.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
36.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
36.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
36.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
36.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
36.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
36.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
35.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
35.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
35.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
35.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
35.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
35.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
35.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
35.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
35.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
35.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
35.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
35.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
35.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
35.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
35.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
35.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
34.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
34.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
34.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
34.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
34.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
34.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
34.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
34.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
34.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
34.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
34.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
33.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
33.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
33.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
33.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
33.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
33.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
33.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
33.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
33.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
33.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
32.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
32.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
32.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
32.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
32.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
32.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
32.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
32.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
32.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
32.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
32.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
31.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
31.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
31.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
31.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
31.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
31.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
31.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
31.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
30.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
30.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
30.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
30.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
30.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
30.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
30.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
30.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
29.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
29.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
29.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
29.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
29.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
29.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
29.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
29.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
29.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
29.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
28.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
28.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
28.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
28.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
28.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
28.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
28.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
28.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
28.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
28.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
28.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
28.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
27.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
27.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
27.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
27.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
27.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
27.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
27.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
27.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
26.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
26.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
26.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
26.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
26.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
26.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
25.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
25.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
25.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
25.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
25.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
25.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
25.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
24.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
24.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
24.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
24.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
24.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
24.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
24.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
23.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
23.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
23.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
23.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
23.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
23.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
22.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
22.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
22.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
21.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
20.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
20.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
19.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
19.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
19.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
18.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
18.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
17.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
16.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
16.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
16.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
15.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
15.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR45 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.3
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
124.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
105.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
98.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
73.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
70.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
70.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
70.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
69.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
65.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
64.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
63.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
63.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
59.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
59.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
58.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
56.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
56.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
56.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
56.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
56.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
54.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
54.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
54.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
54.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
53.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
53.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
52.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
52.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
52.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
52.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
52.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
51.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
51.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
51.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
51.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
51.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
50.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
50.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
50.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
49.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
49.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
49.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
49.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
48.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
48.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
47.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
46.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
46.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
46.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
46.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
46.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
46.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
46.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
45.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
45.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
45.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
44.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
44.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
44.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
44.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
43.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
43.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
43.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
43.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
42.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
42.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
42.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
42.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
41.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
41.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
41.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
40.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
40.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
40.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
40.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
40.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
40.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
40.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
39.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
39.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
39.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
39.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
38.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
38.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
38.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
37.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
37.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
37.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
37.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
36.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
36.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
36.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
36.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
36.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
36.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
36.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
36.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
36.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
35.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
35.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
35.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
35.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
34.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
34.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
34.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
34.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
33.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
33.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
33.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
33.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
33.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
33.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
32.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
32.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
32.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
32.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
32.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
32.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
32.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
32.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
32.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
31.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
31.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
31.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
31.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
31.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
31.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
31.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
31.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
31.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
30.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
30.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
30.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
30.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
30.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
30.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
30.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
30.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
29.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
29.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
29.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
29.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
29.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
29.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
29.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
29.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
29.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
28.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
28.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
28.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
28.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
28.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
28.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
28.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
28.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
27.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
27.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
27.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
27.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
27.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
27.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
27.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
26.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
26.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
26.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
26.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
26.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
26.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
26.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
26.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
26.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
25.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
25.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
25.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
25.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
25.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
25.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
25.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
24.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
24.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
24.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
24.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
24.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
24.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
24.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
24.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
24.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
23.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
23.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
23.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
23.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
23.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
23.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
23.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
23.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
23.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
23.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
22.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
22.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
22.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
22.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
21.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
21.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
21.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
20.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
20.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
20.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
20.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
20.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
20.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
19.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
19.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
19.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
19.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
19.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
18.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
18.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
18.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
18.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
17.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
16.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
16.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
12.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1027
Tumor
0.7
112
Tumor
0.6
125
Tumor
0.5
727
Tumor
0.5
533
Tumor
0.5
953
Tumor
0.5
1043
Tumor
0.5
1041
Tumor
0.4
636
Normal
0.4
981
Tumor
0.4
445
Tumor
0.4
351
Tumor
0.4
722
Normal
0.4
642
Normal
0.4
686
Normal
0.4
283
Tumor
0.4
536
Normal
0.4
257
Tumor
0.4
744
Normal
0.4
815
Tumor
0.4
538
Normal
0.4
448
Normal
0.4
697
Tumor
0.4
857
Tumor
0.3
873
Tumor
0.3
223
Tumor
0.3
672
Normal
0.3
352
Normal
0.3
261
Tumor
0.3
463
Tumor
0.3
354
Normal
0.3
228
Normal
0.3
745
Tumor
0.3
618
Normal
0.3
456
Normal
0.3
186
Normal
0.3
741
Tumor
0.3
392
Normal
0.3
376
Normal
0.2
527
Tumor
0.2
161
Tumor
0.2
431
Tumor
0.2
954
Normal
0.2
818
Normal
0.2
357
Tumor
0.2
716
Normal
0.2
344
Normal
0.2
1022
Normal
0.2
696
Normal
0.2
132
Normal
0.2
865
Tumor
0.2
467
Tumor
0.2
393
Tumor
0.2
823
Tumor
0.2
342
Normal
0.2
466
Normal
0.2
353
Tumor
0.2
452
Normal
0.2
384
Normal
0.2
695
Tumor
0.2
313
Tumor
0.2
557
Tumor
0.2
554
Normal
0.2
388
Normal
0.2
1028
Normal
0.2
137
Tumor
0.2
171
Tumor
0.2
268
Normal
0.2
777
Tumor
0.2
746
Normal
0.2
491
Tumor
0.2
615
Tumor
0.2
192
Normal
0.2
147
Tumor
0.2
755
Tumor
0.2
925
Tumor
0.2
411
Tumor
0.2
723
Tumor
0.2
955
Tumor
0.2
124
Normal
0.2
332
Normal
0.1
286
Normal
0.1
422
Normal
0.1
617
Tumor
0.1
262
Normal
0.1
1032
Normal
0.1
647
Tumor
0.1
412
Normal
0.1
1044
Normal
0.1
468
Normal
0.1
1013
Tumor
0.1
361
Tumor
0.1
214
Normal
0.1
616
Normal
0.1
426
Normal
0.1
395
Tumor
0.1
446
Normal
0.1
141
Tumor
0.1
114
Normal
0.1
966
Normal
0.1
148
Normal
0.1
912
Normal
0.1
952
Normal
0.1
298
Normal
0.1
285
Tumor
0.1
224
Normal
0.1
924
Normal
0.1
311
Tumor
0.1
963
Tumor
0.1
713
Tumor
0.1
432
Normal
0.1
145
Tumor
0.1
714
Normal
0.1
1021
Tumor
0.1
172
Normal
0.1
196
Normal
0.1
546
Normal
0.1
513
Tumor
0.1
663
Tumor
0.1
816
Normal
0.1
358
Normal
0.1
861
Tumor
0.1
648
Normal
0.1
185
Tumor
0.1
421
Tumor
0.1
944
Normal
0.1
737
Tumor
0.1
284
Normal
0.1
851
Tumor
0.1
913
Tumor
0.1
487
Tumor
0.1
738
Normal
0.1
434
Normal
0.1
813
Tumor
0.1
343
Tumor
0.1
218
Normal
0.1
778
Normal
0.1
435
Tumor
0.1
126
Normal
0.1
272
Normal
0.1
488
Normal
0.1
852
Normal
0.1
721
Tumor
0.1
128
Normal
0.1
574
Normal
0.1
368
Normal
0.1
195
Tumor
0.1
135
Tumor
0.1
785
Tumor
0.1
162
Normal
0.1
425
Tumor
0.1
258
Normal
0.1
698
Normal
0.1
363
Tumor
0.1
455
Tumor
0.1
232
Normal
0.1
387
Tumor
0.1
444
Normal
0.0
1026
Normal
0.0
436
Normal
0.0
414
Normal
0.0
878
Normal
0.0
394
Normal
0.0
915
Tumor
0.0
355
Tumor
0.0
534
Normal
0.0
413
Tumor
0.0
976
Normal
0.0
685
Tumor
0.0
514
Normal
0.0
926
Normal
0.0
213
Tumor
0.0
884
Normal
0.0
938
Normal
0.0
365
Tumor
0.0
191
Tumor
0.0
862
Normal
0.0
524
Normal
0.0
977
Tumor
0.0
756
Normal
0.0
627
Tumor
0.0
146
Normal
0.0
923
Tumor
0.0
138
Normal
0.0
863
Tumor
0.0
428
Normal
0.0
516
Normal
0.0
111
Normal
0.0
728
Normal
0.0
222
Normal
0.0
937
Tumor
0.0
424
Normal
0.0
127
Tumor
0.0
858
Normal
0.0
525
Tumor
0.0
443
Tumor
0.0
497
Tumor
0.0
628
Normal
0.0
188
Normal
0.0
494
Normal
0.0
362
Normal
0.0
958
Normal
0.0
568
Normal
0.0
914
Normal
0.0
314
Normal
0.0
572
Normal
0.0
478
Normal
0.0
364
Normal
0.0
366
Normal
0.0
396
Normal
0.0
356
Normal
0.0
573
Tumor
0.0
423
Tumor
0.0
217
Tumor
0.0
964
Normal
0.0
956
Normal
0.0
471
Tumor
0.0
464
Normal
0.0
666
Normal
0.0
386
Normal
0.0
427
Tumor
0.0
473
Tumor
0.0
433
Tumor
0.0
564
Normal
0.0
474
Normal
0.0
742
Normal
-0.1
492
Normal
-0.1
123
Tumor
-0.1
528
Normal
-0.1
635
Tumor
-0.1
911
Tumor
-0.1
451
Tumor
-0.1
142
Normal
-0.1
883
Tumor
-0.1
553
Tumor
-0.1
984
Normal
-0.1
277
Tumor
-0.1
922
Normal
-0.1
484
Normal
-0.1
537
Tumor
-0.1
558
Normal
-0.1
874
Normal
-0.1
187
Tumor
-0.1
864
Normal
-0.1
375
Tumor
-0.1
212
Normal
-0.1
385
Tumor
-0.1
271
Tumor
-0.1
523
Tumor
-0.1
918
Normal
-0.1
943
Tumor
-0.1
447
Tumor
-0.1
968
Normal
-0.1
662
Normal
-0.1
278
Normal
-0.1
267
Tumor
-0.1
383
Tumor
-0.1
493
Tumor
-0.1
341
Tumor
-0.1
297
Tumor
-0.1
982
Normal
-0.1
1042
Normal
-0.2
211
Tumor
-0.2
916
Normal
-0.2
671
Tumor
-0.2
477
Tumor
-0.2
136
Normal
-0.2
1015
Tumor
-0.2
917
Tumor
-0.2
824
Normal
-0.2
545
Tumor
-0.2
415
Tumor
-0.2
786
Normal
-0.2
526
Normal
-0.2
227
Tumor
-0.2
312
Normal
-0.2
515
Tumor
-0.2
328
Normal
-0.2
868
Normal
-0.2
882
Normal
-0.2
867
Tumor
-0.2
416
Normal
-0.2
327
Tumor
-0.2
518
Normal
-0.2
641
Tumor
-0.2
472
Normal
-0.2
881
Tumor
-0.2
231
Tumor
-0.2
1046
Normal
-0.2
498
Normal
-0.2
957
Tumor
-0.2
571
Tumor
-0.3
866
Normal
-0.3
482
Normal
-0.3
113
Tumor
-0.3
1014
Normal
-0.3
221
Tumor
-0.3
461
Tumor
-0.3
664
Normal
-0.3
877
Tumor
-0.3
921
Tumor
-0.3
517
Tumor
-0.3
817
Tumor
-0.3
131
Tumor
-0.3
567
Tumor
-0.3
367
Tumor
-0.3
563
Tumor
-0.3
983
Tumor
-0.3
465
Tumor
-0.3
715
Tumor
-0.4
481
Tumor
-0.4
814
Normal
-0.4
391
Tumor
-0.4
665
Tumor
-0.4
1031
Tumor
-0.4
462
Normal
-0.4
661
Tumor
-0.4
975
Tumor
-0.4
483
Tumor
-0.4
978
Normal
-0.4
535
Tumor
-0.5
967
Tumor
-0.5
1016
Normal
-0.5
331
Tumor
-0.5
1045
Tumor
-0.5
724
Normal
-0.6
951
Tumor
-0.7
965
Tumor
-0.7
1025
Tumor
-0.8
743
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
