HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.0 nTPM
HPA Brain:49.0 nTPM
GTEx:40.0 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Pig:56.6 nTPM
Mouse:49.1 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027562
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 49.0
Sample id Sample description nTPM
Hippocampus
nTPM: 47.9
2148 Female, age 91, left hemisphere 55.7
1911 Female, age 85, right hemisphere 48.4
2621 Female, age 67, right hemisphere 47.6
1898 Male, age 80, left hemisphere 47.5
2529 Female, age 94, left hemisphere 46.2
1855 Male, age 76, left hemisphere 41.9
Dentate gyrus
nTPM: 48.0
2530 Female, age 94, left hemisphere 62.2
2528 Male, age 74, both hemispheres 49.4
1927 Female, age 91, both hemispheres 48.4
2246 Female, age 85, both hemispheres 44.7
2531 Female, age 67, both hemispheres 43.1
2010 Male, age 76, both hemispheres 39.9
Entorhinal gyrus
nTPM: 45.4
2686 Male, age 75, right hemisphere 55.4
2117 Female, age 91, right hemisphere 54.4
2764 Male, age 80, right hemisphere 42.5
1938 Female, age 85, left hemisphere 41.6
1787 Male, age 76, left hemisphere 39.4
2613 Female, age 94, left hemisphere 39.3
Hippocampus, CA1
nTPM: 43.8
2749 Male, age 80, left hemisphere 51.5
1873 Female, age 85, both hemispheres 49.3
2527 Male, age 74, both hemispheres 41.2
2082 Female, age 91, right hemisphere 40.3
2045 Male, age 76, both hemispheres 36.6
Hippocampus, CA2
nTPM: 47.9
1892 Male, age 76, both hemispheres 53.8
2437 Female, age 94, left hemisphere 51.9
1963 Male, age 80, left hemisphere 51.5
2113 Female, age 91, right hemisphere 49.8
2249 Male, age 74, both hemispheres 43.0
1940 Female, age 85, left hemisphere 37.2
Hippocampus, CA3
nTPM: 49.0
2861 Female, age 67, both hemispheres 60.3
2620 Female, age 94, left hemisphere 59.2
1867 Male, age 76, both hemispheres 48.0
2137 Male, age 80, left hemisphere 46.3
2436 Male, age 74, both hemispheres 41.3
1891 Female, age 85, both hemispheres 39.0
Parahippocampal cortex
nTPM: 42.5
2245 Female, age 91, both hemispheres 53.3
2622 Female, age 67, right hemisphere 49.8
1933 Female, age 85, both hemispheres 45.6
2018 Male, age 76, both hemispheres 45.6
2692 Male, age 74, both hemispheres 41.7
2532 Female, age 72, left hemisphere 41.0
2693 Female, age 94, both hemispheres 39.6
1850 Male, age 80, both hemispheres 38.6
1990 Female, age 91, right hemisphere 37.2
2250 Female, age 67, right hemisphere 32.9
Perirhinal gyrus
nTPM: 40.3
1794 Male, age 80, right hemisphere 42.7
1841 Female, age 85, right hemisphere 42.2
2848 Male, age 76, right hemisphere 41.1
2521 Female, age 94, right hemisphere 38.2
1847 Female, age 91, left hemisphere 37.3
Subiculum
nTPM: 43.5
2438 Female, age 94, left hemisphere 55.5
2729 Female, age 91, right hemisphere 48.6
1901 Male, age 80, both hemispheres 41.6
2042 Male, age 76, both hemispheres 40.8
2619 Male, age 74, both hemispheres 39.6
1977 Female, age 85, both hemispheres 34.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.0
Samples: 197

Max nTPM: 73.8
Min nTPM: 20.1
Std nTPM: 9.2
Median nTPM: 38.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 73.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 72.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 72.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 61.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 60.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 58.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 58.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 58.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.5
FF:10153-102I9 76 years, female 40.9
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 56.6
Pig sample Sample description nTPM
Subiculum
nTPM: 49.4
Samples: 4

Max nTPM: 63.6
Min nTPM: 42.5
Sample A Female 63.6
Sample B Female 46.2
Sample C Male 45.1
Sample D Male 42.5
Dorsal hippocampus
nTPM: 56.6
Samples: 4

Max nTPM: 73.2
Min nTPM: 43.0
Sample A Female 73.2
Sample B Female 54.6
Sample C Male 55.6
Sample D Male 43.0
Entorhinal cortex
nTPM: 51.4
Samples: 4

Max nTPM: 58.7
Min nTPM: 43.1
Sample A Female 58.7
Sample B Female 53.2
Sample C Male 50.7
Sample D Male 43.1
Ventral hippocampus
nTPM: 53.0
Samples: 4

Max nTPM: 65.4
Min nTPM: 38.2
Sample A Female 54.5
Sample B Female 38.2
Sample C Male 65.4
Sample D Male 53.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 49.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 52.0
Min nTPM: 46.8
Sample A Male 49.8
Sample B Male 52.0
Sample C Female 46.8
Sample D Female 47.7
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 49.1
Min nTPM: 44.3
Sample A Male 49.1
Sample B Male 44.3
Sample C Female 47.8
Sample D Female 44.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75198190 Antisense, RP_060502_02_B06, Mouse strain C57BL/6J (56 days, male) 0.4

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