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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPTC7 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
51.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
49.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
38.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
36.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
35.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
30.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
30.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
30.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
29.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
29.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
28.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
26.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
25.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
25.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
23.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
21.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
18.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
15.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPTC7 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
58.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
55.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
50.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
43.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
40.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
38.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
37.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
37.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
37.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
37.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
33.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
32.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
31.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
30.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
27.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
26.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
26.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
25.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
25.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
24.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
24.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
23.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
22.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
20.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
20.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
20.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
19.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
19.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
18.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
18.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
18.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
17.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
17.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
15.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
15.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
15.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
13.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
13.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
13.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
10.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
9.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
9.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
7.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
5.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPTC7 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
59.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
56.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
43.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
40.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
39.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
33.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
32.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
27.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
27.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
26.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
25.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
23.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
23.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
21.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
21.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
21.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
19.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
17.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
17.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
14.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
13.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
12.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
12.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPTC7 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
28.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
25.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
22.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
22.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
20.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
18.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
15.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
15.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
15.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
14.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
13.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
13.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
13.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
12.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
11.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
10.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
10.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
9.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
9.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
8.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
8.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
8.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
7.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
7.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
6.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
6.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
6.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
5.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
5.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
5.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
5.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
4.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.4
CPT0001500009
Tumor
1.0
CPT0012670003
Tumor
0.8
CPT0012770003
Normal
0.8
CPT0088690003
Tumor
0.8
CPT0069010001
Normal
0.7
CPT0088640003
Normal
0.6
CPT0024670003
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0009080003
Normal
0.5
CPT0023350003
Tumor
0.5
CPT0009020003
Normal
0.5
CPT0012640003
Normal
0.5
CPT0079510001
Normal
0.5
CPT0078660003
Tumor
0.5
CPT0000790001
Normal
0.4
CPT0065930003
Tumor
0.4
CPT0025060001
Normal
0.4
CPT0012550003
Tumor
0.4
CPT0077140001
Normal
0.4
CPT0014450004
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0065450001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0079000001
Normal
0.4
CPT0012180003
Tumor
0.4
CPT0014470001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0019160001
Normal
0.4
CPT0088970003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0001230001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0007860003
Tumor
0.3
CPT0077500001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0086830003
Normal
0.3
CPT0020020001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0025610001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0066520001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0088780001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0024680001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0081620001
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0092800003
Normal
0.1
CPT0007320003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0010120001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0066480003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0089020003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0078830003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0079270003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0084590001
Normal
-0.4
CPT0025230003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0025170003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0000640003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0001270001
Normal
-0.5
CPT0010160003
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0065870003
Tumor
-0.6
CPT0064370003
Tumor
-0.7
CPT0079380003
Tumor
-0.7
CPT0021240003
Tumor
-0.7
CPT0015910003
Tumor
-0.7
CPT0025580004
Tumor
-0.8
CPT0084560003
Tumor
-0.8
CPT0002350011
Tumor
-0.8
CPT0075130003
Tumor
-0.8
CPT0089460004
Tumor
-0.8
CPT0006630003
Tumor
-0.9
CPT0001340003
Tumor
-1.2
CPT0078930003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
