HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.8 nTPM
HPA Brain:62.8 nTPM
GTEx:16.8 nTPM
FANTOM5:53.1 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:27.9 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030782
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 62.8
Sample id Sample description nTPM
Hippocampus
nTPM: 55.5
2621 Female, age 67, right hemisphere 62.8
1855 Male, age 76, left hemisphere 58.4
2148 Female, age 91, left hemisphere 55.7
1898 Male, age 80, left hemisphere 54.4
1911 Female, age 85, right hemisphere 52.4
2529 Female, age 94, left hemisphere 48.9
Dentate gyrus
nTPM: 57.0
1927 Female, age 91, both hemispheres 74.5
2010 Male, age 76, both hemispheres 61.1
2531 Female, age 67, both hemispheres 59.5
2530 Female, age 94, left hemisphere 54.1
2246 Female, age 85, both hemispheres 50.7
2528 Male, age 74, both hemispheres 42.1
Entorhinal gyrus
nTPM: 59.3
2613 Female, age 94, left hemisphere 71.5
2764 Male, age 80, right hemisphere 63.5
1938 Female, age 85, left hemisphere 62.7
2686 Male, age 75, right hemisphere 60.5
1787 Male, age 76, left hemisphere 55.9
2117 Female, age 91, right hemisphere 41.4
Hippocampus, CA1
nTPM: 62.8
2749 Male, age 80, left hemisphere 87.6
2045 Male, age 76, both hemispheres 65.6
1873 Female, age 85, both hemispheres 58.8
2082 Female, age 91, right hemisphere 55.5
2527 Male, age 74, both hemispheres 46.7
Hippocampus, CA2
nTPM: 51.5
1963 Male, age 80, left hemisphere 62.0
1892 Male, age 76, both hemispheres 58.7
2113 Female, age 91, right hemisphere 50.9
1940 Female, age 85, left hemisphere 50.3
2437 Female, age 94, left hemisphere 46.8
2249 Male, age 74, both hemispheres 39.9
Hippocampus, CA3
nTPM: 58.8
2137 Male, age 80, left hemisphere 80.2
2861 Female, age 67, both hemispheres 64.7
2620 Female, age 94, left hemisphere 62.9
1867 Male, age 76, both hemispheres 52.2
1891 Female, age 85, both hemispheres 46.9
2436 Male, age 74, both hemispheres 45.7
Parahippocampal cortex
nTPM: 56.2
2245 Female, age 91, both hemispheres 64.8
2693 Female, age 94, both hemispheres 62.3
2622 Female, age 67, right hemisphere 60.2
2532 Female, age 72, left hemisphere 58.7
1933 Female, age 85, both hemispheres 57.6
1850 Male, age 80, both hemispheres 55.9
2018 Male, age 76, both hemispheres 55.3
1990 Female, age 91, right hemisphere 53.2
2250 Female, age 67, right hemisphere 50.1
2692 Male, age 74, both hemispheres 44.4
Perirhinal gyrus
nTPM: 61.4
1847 Female, age 91, left hemisphere 68.7
1794 Male, age 80, right hemisphere 61.3
2521 Female, age 94, right hemisphere 60.9
1841 Female, age 85, right hemisphere 60.1
2848 Male, age 76, right hemisphere 56.0
Subiculum
nTPM: 50.4
1901 Male, age 80, both hemispheres 57.7
1977 Female, age 85, both hemispheres 57.4
2042 Male, age 76, both hemispheres 51.1
2729 Female, age 91, right hemisphere 47.9
2438 Female, age 94, left hemisphere 46.0
2619 Male, age 74, both hemispheres 42.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 32.7
Min nTPM: 6.8
Std nTPM: 5.8
Median nTPM: 16.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 32.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 30.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 29.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 29.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 28.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 28.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 28.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 28.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 27.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.1
FF:10169-103B7 60 years, female 55.0
FF:10153-102I9 76 years, female 51.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 29.4
Pig sample Sample description nTPM
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.2
Sample A Female 23.9
Sample B Female 17.5
Sample C Male 24.3
Sample D Male 16.2
Dorsal hippocampus
nTPM: 29.0
Samples: 4

Max nTPM: 32.8
Min nTPM: 21.3
Sample A Female 32.4
Sample B Female 32.8
Sample C Male 21.3
Sample D Male 29.6
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.1
Min nTPM: 17.5
Sample A Female 21.9
Sample B Female 17.5
Sample C Male 22.1
Sample D Male 20.8
Ventral hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 36.2
Min nTPM: 19.9
Sample A Female 28.4
Sample B Female 19.9
Sample C Male 36.2
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.5
Sample A Male 21.0
Sample B Male 18.5
Sample C Female 21.9
Sample D Female 25.3
Hippocampal formation
nTPM: 28.0
Samples: 4

Max nTPM: 32.3
Min nTPM: 21.3
Sample A Male 21.3
Sample B Male 29.7
Sample C Female 32.3
Sample D Female 28.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
70593310 Antisense, RP_050407_03_A10, Mouse strain C57BL/6J (56 days, male) 5.2

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