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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SULF2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
449.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
166.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
141.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
139.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
125.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
119.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
117.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
116.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
112.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
104.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
103.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
103.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
102.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
102.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
99.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
97.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
96.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
91.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
90.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
89.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
88.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
79.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
74.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
74.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
70.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
69.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
68.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
66.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
66.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
66.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
65.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
63.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
60.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
59.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
58.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
53.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
52.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
49.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
48.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
47.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
47.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
45.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
45.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
43.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
43.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
42.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
42.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
42.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
42.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
41.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
41.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
40.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
40.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
40.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
40.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
39.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
39.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
39.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
38.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
37.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
37.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
36.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
35.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
35.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
34.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
34.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
34.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
33.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
33.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
33.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
33.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
32.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
32.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
32.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
31.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
31.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
31.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
29.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
28.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
28.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
28.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
27.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
27.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
27.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
27.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
26.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
26.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
25.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
25.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
25.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
25.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
24.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
24.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
24.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
24.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
24.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
24.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
24.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
23.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
23.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
23.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
22.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
22.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
22.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
21.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
21.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
21.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
21.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
21.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
21.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
20.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
20.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
20.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
20.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
20.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
20.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
19.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
19.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
19.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
19.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
17.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
15.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
15.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
15.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
15.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
15.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
14.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
13.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
13.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
13.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
13.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
12.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
12.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
11.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
11.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
10.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
9.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
9.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
8.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
6.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
5.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
5.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
5.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
4.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
4.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
4.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
4.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
4.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
4.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
3.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
3.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
3.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
3.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
3.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
3.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
3.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
3.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
3.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
3.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
3.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
3.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
3.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
3.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
2.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SULF2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
231
Samples
Sample
Description
TPM
DO45245
0 years, female, NA, stage:2, dead, 240 days
100.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
97.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
85.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
82.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
80.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
72.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
65.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
65.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
64.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
63.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
62.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
58.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
57.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
55.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
54.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
52.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
51.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
48.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
47.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
45.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
44.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
43.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
42.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
42.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
42.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
42.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
42.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
41.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
40.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
38.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
35.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
34.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
34.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
34.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
33.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
32.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
32.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
31.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
31.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
30.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
29.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
28.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
28.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
27.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
27.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
27.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
26.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
26.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
26.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
26.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
26.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
26.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
26.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
25.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
25.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
24.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
24.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
24.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
24.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
24.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
23.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
23.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
22.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
22.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
22.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
19.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
18.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
18.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
18.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
18.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
17.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
17.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
17.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
16.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
16.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
15.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
15.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
15.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
15.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
15.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
14.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
14.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
12.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
12.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
12.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
12.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
12.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
10.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
10.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
9.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
8.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
5.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
5.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
5.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
4.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
4.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
4.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
4.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
3.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
3.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
3.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
3.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
2.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
2.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
2.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
2.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
2.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
2.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
1.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
1.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
1.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
1.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
1.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
1.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
1.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
1.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
1.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
1.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
1.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
671
Tumor
1.6
545
Tumor
1.5
447
Tumor
1.4
1027
Tumor
1.4
881
Tumor
1.3
395
Tumor
1.3
426
Normal
1.2
488
Normal
1.1
421
Tumor
1.1
283
Tumor
1.1
428
Normal
1.1
814
Normal
1.0
943
Tumor
1.0
484
Normal
1.0
211
Tumor
1.0
368
Normal
1.0
567
Tumor
1.0
414
Normal
1.0
388
Normal
0.9
413
Tumor
0.9
223
Tumor
0.9
813
Tumor
0.9
424
Normal
0.8
384
Normal
0.8
366
Normal
0.8
978
Normal
0.8
362
Normal
0.8
376
Normal
0.8
536
Normal
0.8
192
Normal
0.8
386
Normal
0.8
877
Tumor
0.8
1014
Normal
0.8
365
Tumor
0.7
394
Normal
0.7
697
Tumor
0.7
455
Tumor
0.7
984
Normal
0.7
464
Normal
0.7
868
Normal
0.7
393
Tumor
0.7
958
Normal
0.6
1016
Normal
0.6
864
Normal
0.6
982
Normal
0.6
452
Normal
0.6
917
Tumor
0.6
145
Tumor
0.6
363
Tumor
0.6
422
Normal
0.6
956
Normal
0.5
262
Normal
0.5
136
Normal
0.5
383
Tumor
0.5
494
Normal
0.5
391
Tumor
0.5
857
Tumor
0.5
392
Normal
0.5
525
Tumor
0.5
191
Tumor
0.5
563
Tumor
0.5
524
Normal
0.5
222
Normal
0.5
298
Normal
0.5
468
Normal
0.5
361
Tumor
0.5
261
Tumor
0.5
446
Normal
0.4
268
Normal
0.4
396
Normal
0.4
195
Tumor
0.4
213
Tumor
0.4
385
Tumor
0.4
672
Normal
0.4
272
Normal
0.4
535
Tumor
0.4
546
Normal
0.4
975
Tumor
0.4
456
Normal
0.4
214
Normal
0.4
866
Normal
0.4
285
Tumor
0.4
514
Normal
0.4
498
Normal
0.4
367
Tumor
0.4
874
Normal
0.4
278
Normal
0.3
466
Normal
0.3
355
Tumor
0.3
218
Normal
0.3
131
Tumor
0.3
137
Tumor
0.3
728
Normal
0.3
427
Tumor
0.3
862
Normal
0.3
534
Normal
0.3
517
Tumor
0.3
528
Normal
0.3
416
Normal
0.3
786
Normal
0.3
516
Normal
0.3
953
Tumor
0.3
662
Normal
0.3
423
Tumor
0.3
258
Normal
0.3
434
Normal
0.3
387
Tumor
0.2
1032
Normal
0.2
444
Normal
0.2
436
Normal
0.2
146
Normal
0.2
666
Normal
0.2
527
Tumor
0.2
518
Normal
0.2
916
Normal
0.2
648
Normal
0.2
664
Normal
0.2
852
Normal
0.2
463
Tumor
0.2
554
Normal
0.2
1044
Normal
0.2
328
Normal
0.2
364
Normal
0.2
228
Normal
0.2
312
Normal
0.2
425
Tumor
0.2
467
Tumor
0.2
873
Tumor
0.2
538
Normal
0.2
314
Normal
0.2
448
Normal
0.2
432
Normal
0.2
412
Normal
0.1
132
Normal
0.1
356
Normal
0.1
1022
Normal
0.1
332
Normal
0.1
564
Normal
0.1
571
Tumor
0.1
492
Normal
0.1
744
Normal
0.1
981
Tumor
0.1
952
Normal
0.1
968
Normal
0.1
138
Normal
0.1
572
Normal
0.1
817
Tumor
0.1
863
Tumor
0.1
976
Normal
0.1
286
Normal
0.1
462
Normal
0.1
212
Normal
0.0
472
Normal
0.0
461
Tumor
0.0
142
Normal
0.0
224
Normal
0.0
196
Normal
0.0
914
Normal
0.0
465
Tumor
0.0
375
Tumor
0.0
284
Normal
0.0
526
Normal
0.0
558
Normal
0.0
433
Tumor
0.0
232
Normal
0.0
926
Normal
0.0
573
Tumor
0.0
918
Normal
0.0
913
Tumor
0.0
1042
Normal
0.0
823
Tumor
0.0
415
Tumor
0.0
966
Normal
-0.1
557
Tumor
-0.1
921
Tumor
-0.1
217
Tumor
-0.1
331
Tumor
-0.1
574
Normal
-0.1
221
Tumor
-0.1
451
Tumor
-0.1
1028
Normal
-0.1
515
Tumor
-0.1
487
Tumor
-0.1
481
Tumor
-0.1
944
Normal
-0.1
924
Normal
-0.1
1026
Normal
-0.2
883
Tumor
-0.2
884
Normal
-0.2
861
Tumor
-0.2
963
Tumor
-0.2
568
Normal
-0.2
141
Tumor
-0.2
227
Tumor
-0.2
882
Normal
-0.2
922
Normal
-0.2
665
Tumor
-0.2
311
Tumor
-0.2
938
Normal
-0.2
482
Normal
-0.2
523
Tumor
-0.2
756
Normal
-0.2
964
Normal
-0.3
483
Tumor
-0.3
297
Tumor
-0.3
267
Tumor
-0.3
816
Normal
-0.3
513
Tumor
-0.3
818
Normal
-0.3
867
Tumor
-0.3
1015
Tumor
-0.3
1046
Normal
-0.3
724
Normal
-0.3
553
Tumor
-0.3
727
Tumor
-0.3
698
Normal
-0.3
965
Tumor
-0.3
661
Tumor
-0.3
477
Tumor
-0.3
445
Tumor
-0.4
271
Tumor
-0.4
277
Tumor
-0.4
912
Normal
-0.4
663
Tumor
-0.4
474
Normal
-0.4
478
Normal
-0.4
858
Normal
-0.4
967
Tumor
-0.4
431
Tumor
-0.4
815
Tumor
-0.4
954
Normal
-0.4
533
Tumor
-0.4
537
Tumor
-0.4
257
Tumor
-0.4
745
Tumor
-0.4
135
Tumor
-0.5
327
Tumor
-0.5
824
Normal
-0.5
738
Normal
-0.5
1045
Tumor
-0.5
878
Normal
-0.5
955
Tumor
-0.5
443
Tumor
-0.6
647
Tumor
-0.6
923
Tumor
-0.6
1043
Tumor
-0.6
231
Tumor
-0.6
746
Normal
-0.6
313
Tumor
-0.7
493
Tumor
-0.7
937
Tumor
-0.7
951
Tumor
-0.7
851
Tumor
-0.8
723
Tumor
-0.8
865
Tumor
-0.8
957
Tumor
-0.8
742
Normal
-0.8
777
Tumor
-0.8
778
Normal
-0.8
915
Tumor
-0.9
491
Tumor
-0.9
977
Tumor
-0.9
983
Tumor
-0.9
435
Tumor
-0.9
911
Tumor
-0.9
755
Tumor
-1.0
925
Tumor
-1.0
785
Tumor
-1.0
1013
Tumor
-1.0
471
Tumor
-1.1
497
Tumor
-1.1
473
Tumor
-1.2
1041
Tumor
-1.2
737
Tumor
-1.3
743
Tumor
-1.3
741
Tumor
-1.3
411
Tumor
-1.3
1025
Tumor
-1.4
1021
Tumor
-1.4
1031
Tumor
-1.8
351
Tumor
N/A
352
Normal
N/A
111
Normal
N/A
353
Tumor
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
114
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
125
Tumor
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
721
Tumor
N/A
722
Normal
N/A
171
Tumor
N/A
172
Normal
N/A
615
Tumor
N/A
616
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
635
Tumor
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
695
Tumor
N/A
696
Normal
N/A
341
Tumor
N/A
342
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
