HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:8.7 nTPM
HPA Brain:26.9 nTPM
GTEx:8.7 nTPM
FANTOM5:64.1 Scaled Tags Per Million
Pig:33.2 nTPM
Mouse:18.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038272Antibody HPA038273
Glial cells MediumLow
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
2529 Female, age 94, left hemisphere 29.0
1898 Male, age 80, left hemisphere 26.5
2621 Female, age 67, right hemisphere 26.4
1855 Male, age 76, left hemisphere 25.6
1911 Female, age 85, right hemisphere 24.8
2148 Female, age 91, left hemisphere 24.5
Dentate gyrus
nTPM: 24.0
2010 Male, age 76, both hemispheres 27.4
2246 Female, age 85, both hemispheres 25.0
2530 Female, age 94, left hemisphere 24.7
2531 Female, age 67, both hemispheres 24.3
1927 Female, age 91, both hemispheres 21.5
2528 Male, age 74, both hemispheres 21.2
Entorhinal gyrus
nTPM: 24.2
2117 Female, age 91, right hemisphere 29.7
1938 Female, age 85, left hemisphere 26.2
1787 Male, age 76, left hemisphere 24.1
2686 Male, age 75, right hemisphere 24.1
2764 Male, age 80, right hemisphere 21.5
2613 Female, age 94, left hemisphere 19.3
Hippocampus, CA1
nTPM: 23.9
2749 Male, age 80, left hemisphere 25.6
1873 Female, age 85, both hemispheres 25.2
2045 Male, age 76, both hemispheres 24.4
2527 Male, age 74, both hemispheres 22.6
2082 Female, age 91, right hemisphere 21.9
Hippocampus, CA2
nTPM: 24.9
1940 Female, age 85, left hemisphere 27.2
1892 Male, age 76, both hemispheres 25.5
2249 Male, age 74, both hemispheres 25.0
2113 Female, age 91, right hemisphere 24.0
2437 Female, age 94, left hemisphere 24.0
1963 Male, age 80, left hemisphere 23.5
Hippocampus, CA3
nTPM: 24.5
1867 Male, age 76, both hemispheres 26.9
1891 Female, age 85, both hemispheres 26.0
2137 Male, age 80, left hemisphere 25.6
2436 Male, age 74, both hemispheres 23.0
2861 Female, age 67, both hemispheres 22.8
2620 Female, age 94, left hemisphere 22.5
Parahippocampal cortex
nTPM: 24.2
2018 Male, age 76, both hemispheres 26.6
2245 Female, age 91, both hemispheres 26.1
1850 Male, age 80, both hemispheres 25.9
2532 Female, age 72, left hemisphere 24.1
2622 Female, age 67, right hemisphere 24.1
2692 Male, age 74, both hemispheres 24.1
1933 Female, age 85, both hemispheres 23.7
2250 Female, age 67, right hemisphere 23.5
1990 Female, age 91, right hemisphere 22.4
2693 Female, age 94, both hemispheres 21.8
Perirhinal gyrus
nTPM: 24.3
1841 Female, age 85, right hemisphere 26.2
2848 Male, age 76, right hemisphere 25.9
1794 Male, age 80, right hemisphere 24.4
2521 Female, age 94, right hemisphere 23.3
1847 Female, age 91, left hemisphere 21.8
Subiculum
nTPM: 26.9
2438 Female, age 94, left hemisphere 29.8
2042 Male, age 76, both hemispheres 28.6
1901 Male, age 80, both hemispheres 27.1
1977 Female, age 85, both hemispheres 26.3
2619 Male, age 74, both hemispheres 25.0
2729 Female, age 91, right hemisphere 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.7
Samples: 197

Max nTPM: 17.4
Min nTPM: 4.6
Std nTPM: 2.3
Median nTPM: 8.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 17.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 16.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 16.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 16.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 15.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 15.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 14.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 14.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 14.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 13.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 13.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.1
FF:10153-102I9 76 years, female 76.4
FF:10169-103B7 60 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 33.2
Pig sample Sample description nTPM
Subiculum
nTPM: 30.8
Samples: 4

Max nTPM: 36.2
Min nTPM: 28.1
Sample A Female 36.2
Sample B Female 28.6
Sample C Male 28.1
Sample D Male 30.4
Dorsal hippocampus
nTPM: 33.2
Samples: 4

Max nTPM: 36.9
Min nTPM: 28.3
Sample A Female 36.3
Sample B Female 31.3
Sample C Male 36.9
Sample D Male 28.3
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 32.2
Min nTPM: 29.5
Sample A Female 30.4
Sample B Female 32.2
Sample C Male 31.6
Sample D Male 29.5
Ventral hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 32.5
Min nTPM: 25.1
Sample A Female 32.5
Sample B Female 28.7
Sample C Male 25.1
Sample D Male 28.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 15.8
Sample A Male 17.3
Sample B Male 16.3
Sample C Female 17.3
Sample D Female 15.8
Hippocampal formation
nTPM: 18.1
Samples: 4

Max nTPM: 19.4
Min nTPM: 17.3
Sample A Male 17.3
Sample B Male 19.4
Sample C Female 17.9
Sample D Female 17.9

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