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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
198.4
nTPM
GTEx:
198.4
nTPM
FANTOM5:
186.4
Scaled Tags Per Million
Pig:
56.8
nTPM
Mouse:
126.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
198.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 198.4
Samples: 105
Max nTPM: 449.0
Min nTPM: 56.9
Std nTPM: 69.6
Median nTPM:
352_1
62 years, male
449.0
321_1
62 years, female
362.7
229_1
69 years, female
327.1
218_1
71 years, female
312.6
375_1
74 years, female
312.2
286_1
68 years, female
311.9
447_1
81 years, male
305.1
355_1
70 years, female
299.8
386_1
76 years, male
299.5
376_1
75 years, female
292.0
172_1
72 years, female
290.7
246_1
77 years, male
289.9
319_1
81 years, male
288.1
316_1
62 years, male
286.1
379_1
60 years, male
282.1
237_1
82 years, male
275.6
356_1
87 years, female
267.9
354_1
81 years, female
266.7
425_1
59 years, female
266.4
389_1
86 years, female
261.7
217_1
76 years, male
260.5
243_1
75 years, male
257.3
350_1
84 years, female
252.2
353_1
82 years, female
250.9
347_1
72 years, male
250.7
292_1
71 years, male
248.7
394_1
75 years, female
246.6
349_1
83 years, male
242.3
499_1
55 years, female
242.1
266_1
85 years, male
236.0
320_1
89 years, female
233.8
377_1
82 years, female
233.3
163_1
78 years, male
231.7
404_1
82 years, female
229.4
177_1
74 years, male
227.9
318_1
68 years, male
226.0
480_1
63 years, male
225.7
6_1
73 years, female
217.7
405_1
91 years, male
217.1
468_1
89 years, male
216.7
406_1
79 years, male
215.6
293_1
68 years, female
215.1
251_1
78 years, male
212.9
348_1
84 years, male
209.9
517_1
88 years, male
207.2
265_1
87 years, male
206.8
396_1
62 years, male
205.1
526_1
61 years, male
204.8
384_1
83 years, male
204.6
518_1
75 years, female
203.6
322_1
76 years, male
201.1
503_1
68 years, male
201.0
506_1
65 years, male
200.6
324_1
76 years, male
198.3
351_1
91 years, male
195.7
311_1
78 years, male
193.0
313_1
79 years, female
184.8
189_1
76 years, male
184.5
153_1
70 years, female
182.6
291_1
76 years, male
181.2
173_1
67 years, male
181.1
35_1
74 years, female
176.0
295_1
61 years, female
173.8
99_1
64 years, male
166.6
317_1
60 years, male
164.5
288_1
66 years, female
161.5
335_1
73 years, female
161.1
307_1
66 years, female
160.7
120_1
70 years, female
159.8
115_1
83 years, male
157.4
452_1
88 years, female
154.7
145_1
84 years, male
154.3
126_1
63 years, male
150.1
415_1
77 years, female
148.9
117_1
61 years, male
148.3
264_1
73 years, female
148.2
254_1
77 years, female
146.8
18_1
88 years, male
146.7
17_1
71 years, male
144.7
81_1
67 years, male
142.4
2_1
77 years, female
141.9
142_1
61 years, female
141.8
315_1
62 years, female
141.3
9_1
66 years, female
139.4
137_1
83 years, male
138.8
314_1
67 years, male
138.8
139_1
64 years, female
133.0
162_1
79 years, female
132.0
32_1
67 years, male
130.7
119_1
70 years, female
128.7
43_1
64 years, female
126.8
4_1
88 years, female
125.8
414_1
84 years, female
125.7
466_1
57 years, female
118.5
109_1
81 years, female
116.3
495_1
57 years, female
115.1
42_1
85 years, male
114.4
41_1
94 years, female
98.3
501_1
88 years, male
97.7
413_1
59 years, female
94.2
89_1
63 years, male
88.3
149_1
88 years, male
88.3
308_1
70 years, female
79.6
490_1
67 years, female
67.0
491_1
89 years, female
56.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.