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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ACADSB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
211.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
175.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
139.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
137.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
132.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
129.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
126.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
124.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
115.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
113.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
112.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
112.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
111.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
106.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
106.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
104.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
102.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
100.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
99.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
96.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
96.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
95.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
91.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
90.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
89.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
88.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
88.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
87.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
87.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
85.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
84.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
84.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
82.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
81.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
81.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
80.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
80.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
79.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
75.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
74.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
73.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
73.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
73.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
72.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
72.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
71.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
69.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
68.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
68.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
67.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
67.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
66.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
65.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
65.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
65.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
62.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
61.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
60.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
59.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
59.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
59.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
58.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
58.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
58.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
57.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
56.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
56.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
56.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
56.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
55.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
55.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
55.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
55.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
54.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
54.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
54.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
53.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
53.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
53.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
53.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
52.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
52.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
52.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
52.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
51.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
50.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
50.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
50.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
50.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
49.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
49.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
49.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
49.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
48.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
48.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
47.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
47.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
47.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
47.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
47.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
46.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
46.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
46.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
46.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
46.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
46.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
46.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
46.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
45.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
45.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
45.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
45.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
44.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
44.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
44.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
44.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
44.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
43.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
43.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
43.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
43.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
43.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
42.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
42.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
42.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
42.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
42.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
41.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
40.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
40.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
39.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
39.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
39.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
39.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
38.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
38.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
38.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
38.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
37.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
37.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
37.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
36.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
36.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
36.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
36.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
36.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
35.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
35.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
35.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
35.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
35.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
35.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
34.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
34.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
34.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
34.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
34.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
34.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
34.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
34.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
33.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
33.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
33.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
32.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
32.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
32.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
32.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
32.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
32.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
31.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
31.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
31.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
31.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
31.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
31.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
31.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
31.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
31.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
30.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
30.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
30.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
30.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
29.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
29.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
29.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
29.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
29.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
29.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
29.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
29.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
28.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
28.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
27.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
27.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
27.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
27.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
27.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
27.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
27.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
26.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
26.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
26.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
26.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
26.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
26.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
26.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
25.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
25.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
25.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
24.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
24.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
24.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
24.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
24.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
24.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
24.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
23.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
23.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
23.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
23.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
23.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
23.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
23.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
23.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
22.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
22.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
22.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
22.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
22.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
21.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
21.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
21.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
21.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
21.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
21.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
21.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
21.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
20.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
20.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
20.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
20.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
20.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
19.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
19.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
19.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
18.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
18.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
18.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
18.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
18.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
18.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
18.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
17.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
17.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
17.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
17.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
16.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
16.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
16.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
16.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
15.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
15.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
15.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
15.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
15.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
15.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
14.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
14.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
14.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
13.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
13.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
12.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
12.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
11.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
11.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
11.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
10.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
9.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
9.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
7.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
7.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
4.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
3.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ACADSB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.3
Number of samples
231
Samples
Sample
Description
TPM
DO48677
0 years, male, NA, stage:3, alive, 1140 days
213.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
190.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
177.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
167.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
152.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
145.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
136.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
133.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
131.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
131.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
131.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
127.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
126.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
125.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
122.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
110.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
107.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
107.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
104.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
103.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
100.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
97.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
95.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
93.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
87.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
83.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
83.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
82.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
82.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
80.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
77.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
76.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
75.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
75.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
74.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
73.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
72.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
72.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
71.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
71.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
71.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
68.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
68.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
68.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
68.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
67.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
66.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
66.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
65.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
65.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
64.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
64.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
63.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
62.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
62.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
62.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
62.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
62.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
61.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
61.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
60.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
60.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
59.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
59.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
59.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
59.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
58.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
58.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
57.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
57.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
56.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
56.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
56.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
54.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
54.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
53.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
53.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
53.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
51.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
51.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
49.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
49.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
49.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
48.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
48.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
47.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
47.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
47.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
47.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
46.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
46.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
45.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
45.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
44.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
43.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
42.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
42.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
42.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
41.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
41.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
40.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
40.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
39.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
38.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
37.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
37.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
37.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
37.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
36.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
35.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
35.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
34.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
34.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
33.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
33.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
33.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
33.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
32.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
32.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
31.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
30.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
30.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
30.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
29.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
29.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
29.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
29.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
29.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
28.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
27.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
27.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
27.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
27.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
27.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
26.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
26.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
26.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
26.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
25.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
25.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
25.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
25.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
24.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
24.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
24.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
24.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
24.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
24.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
23.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
23.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
23.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
23.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
22.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
22.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
21.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
21.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
21.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
21.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
19.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
19.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
18.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
18.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
17.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
17.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
16.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
16.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
16.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
15.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
14.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
10.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
9.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
8.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
7.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
6.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
5.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
5.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
4.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
4.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
4.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
2.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
1.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
1.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
452
Normal
1.1
128
Normal
1.0
744
Normal
1.0
227
Tumor
1.0
342
Normal
1.0
636
Normal
1.0
742
Normal
0.9
571
Tumor
0.9
186
Normal
0.9
196
Normal
0.9
394
Normal
0.8
648
Normal
0.8
435
Tumor
0.8
862
Normal
0.8
142
Normal
0.8
746
Normal
0.8
756
Normal
0.8
912
Normal
0.8
462
Normal
0.7
1014
Normal
0.7
132
Normal
0.7
824
Normal
0.7
878
Normal
0.7
448
Normal
0.7
436
Normal
0.7
882
Normal
0.7
568
Normal
0.7
698
Normal
0.7
298
Normal
0.7
944
Normal
0.7
786
Normal
0.7
162
Normal
0.7
392
Normal
0.7
534
Normal
0.7
172
Normal
0.7
858
Normal
0.7
222
Normal
0.7
938
Normal
0.7
1032
Normal
0.7
546
Normal
0.7
1026
Normal
0.7
922
Normal
0.6
426
Normal
0.6
723
Tumor
0.6
488
Normal
0.6
148
Normal
0.6
964
Normal
0.6
866
Normal
0.6
982
Normal
0.6
376
Normal
0.6
466
Normal
0.6
954
Normal
0.6
412
Normal
0.6
666
Normal
0.6
482
Normal
0.6
465
Tumor
0.6
1046
Normal
0.6
344
Normal
0.6
354
Normal
0.6
484
Normal
0.6
738
Normal
0.6
358
Normal
0.6
356
Normal
0.6
572
Normal
0.5
818
Normal
0.5
332
Normal
0.5
628
Normal
0.5
695
Tumor
0.5
231
Tumor
0.5
642
Normal
0.5
554
Normal
0.5
618
Normal
0.5
1016
Normal
0.5
258
Normal
0.5
686
Normal
0.5
352
Normal
0.5
564
Normal
0.5
864
Normal
0.5
314
Normal
0.5
538
Normal
0.5
278
Normal
0.5
984
Normal
0.5
967
Tumor
0.5
664
Normal
0.5
114
Normal
0.5
267
Tumor
0.5
112
Tumor
0.4
672
Normal
0.4
1022
Normal
0.4
414
Normal
0.4
1025
Tumor
0.4
778
Normal
0.4
232
Normal
0.4
363
Tumor
0.4
696
Normal
0.4
446
Normal
0.4
396
Normal
0.4
914
Normal
0.4
228
Normal
0.4
616
Normal
0.4
868
Normal
0.4
924
Normal
0.4
111
Normal
0.4
124
Normal
0.4
464
Normal
0.4
1041
Tumor
0.3
494
Normal
0.3
528
Normal
0.3
472
Normal
0.3
716
Normal
0.3
925
Tumor
0.3
627
Tumor
0.3
926
Normal
0.3
146
Normal
0.3
514
Normal
0.3
468
Normal
0.3
714
Normal
0.3
526
Normal
0.3
968
Normal
0.3
883
Tumor
0.3
366
Normal
0.3
553
Tumor
0.3
662
Normal
0.3
384
Normal
0.3
214
Normal
0.3
364
Normal
0.3
357
Tumor
0.3
574
Normal
0.3
524
Normal
0.3
816
Normal
0.3
286
Normal
0.3
432
Normal
0.3
428
Normal
0.2
136
Normal
0.2
518
Normal
0.2
328
Normal
0.2
413
Tumor
0.2
873
Tumor
0.2
915
Tumor
0.2
852
Normal
0.2
138
Normal
0.2
456
Normal
0.2
937
Tumor
0.2
976
Normal
0.2
884
Normal
0.2
722
Normal
0.2
218
Normal
0.2
918
Normal
0.2
443
Tumor
0.2
647
Tumor
0.1
966
Normal
0.1
411
Tumor
0.1
952
Normal
0.1
558
Normal
0.1
1044
Normal
0.1
728
Normal
0.1
416
Normal
0.1
477
Tumor
0.1
741
Tumor
0.1
1028
Normal
0.1
958
Normal
0.1
474
Normal
0.1
755
Tumor
0.1
361
Tumor
0.1
422
Normal
0.1
284
Normal
0.1
473
Tumor
0.1
516
Normal
0.1
537
Tumor
0.0
911
Tumor
0.0
127
Tumor
0.0
513
Tumor
0.0
368
Normal
0.0
478
Normal
0.0
978
Normal
0.0
224
Normal
0.0
963
Tumor
0.0
272
Normal
0.0
367
Tumor
0.0
221
Tumor
0.0
874
Normal
0.0
388
Normal
-0.1
386
Normal
-0.1
713
Tumor
-0.1
1042
Normal
-0.1
481
Tumor
-0.1
867
Tumor
-0.1
1045
Tumor
-0.1
312
Normal
-0.1
444
Normal
-0.1
262
Normal
-0.1
362
Normal
-0.1
341
Tumor
-0.1
126
Normal
-0.1
451
Tumor
-0.1
923
Tumor
-0.2
498
Normal
-0.2
1031
Tumor
-0.2
212
Normal
-0.2
492
Normal
-0.2
391
Tumor
-0.2
525
Tumor
-0.2
641
Tumor
-0.2
271
Tumor
-0.2
916
Normal
-0.2
956
Normal
-0.2
268
Normal
-0.2
981
Tumor
-0.2
185
Tumor
-0.2
434
Normal
-0.2
857
Tumor
-0.3
557
Tumor
-0.3
563
Tumor
-0.3
1043
Tumor
-0.3
195
Tumor
-0.3
445
Tumor
-0.3
1021
Tumor
-0.3
431
Tumor
-0.3
727
Tumor
-0.3
955
Tumor
-0.3
685
Tumor
-0.3
536
Normal
-0.3
493
Tumor
-0.3
415
Tumor
-0.4
615
Tumor
-0.4
483
Tumor
-0.4
424
Normal
-0.4
217
Tumor
-0.4
715
Tumor
-0.4
517
Tumor
-0.4
487
Tumor
-0.4
113
Tumor
-0.4
957
Tumor
-0.4
171
Tumor
-0.5
635
Tumor
-0.5
261
Tumor
-0.5
353
Tumor
-0.5
421
Tumor
-0.5
815
Tumor
-0.5
192
Normal
-0.5
965
Tumor
-0.5
355
Tumor
-0.5
277
Tumor
-0.6
953
Tumor
-0.6
721
Tumor
-0.6
951
Tumor
-0.6
433
Tumor
-0.6
188
Normal
-0.6
423
Tumor
-0.6
463
Tumor
-0.6
851
Tumor
-0.6
823
Tumor
-0.6
861
Tumor
-0.6
745
Tumor
-0.6
977
Tumor
-0.6
785
Tumor
-0.7
881
Tumor
-0.7
123
Tumor
-0.7
983
Tumor
-0.7
393
Tumor
-0.7
145
Tumor
-0.7
461
Tumor
-0.7
147
Tumor
-0.8
191
Tumor
-0.8
447
Tumor
-0.8
697
Tumor
-0.8
313
Tumor
-0.8
141
Tumor
-0.8
187
Tumor
-0.8
527
Tumor
-0.8
921
Tumor
-0.9
161
Tumor
-0.9
223
Tumor
-0.9
533
Tumor
-1.0
743
Tumor
-1.0
943
Tumor
-1.0
257
Tumor
-1.0
975
Tumor
-1.0
1015
Tumor
-1.0
814
Normal
-1.0
327
Tumor
-1.0
665
Tumor
-1.0
813
Tumor
-1.0
1013
Tumor
-1.0
617
Tumor
-1.1
285
Tumor
-1.1
1027
Tumor
-1.1
425
Tumor
-1.1
877
Tumor
-1.1
297
Tumor
-1.1
331
Tumor
-1.1
471
Tumor
-1.1
491
Tumor
-1.2
351
Tumor
-1.3
573
Tumor
-1.3
567
Tumor
-1.3
917
Tumor
-1.3
213
Tumor
-1.3
343
Tumor
-1.3
515
Tumor
-1.3
365
Tumor
-1.4
913
Tumor
-1.4
383
Tumor
-1.4
387
Tumor
-1.4
131
Tumor
-1.4
535
Tumor
-1.5
497
Tumor
-1.5
137
Tumor
-1.5
817
Tumor
-1.5
545
Tumor
-1.5
671
Tumor
-1.5
125
Tumor
-1.5
467
Tumor
-1.5
863
Tumor
-1.5
455
Tumor
-1.6
135
Tumor
-1.6
663
Tumor
-1.6
427
Tumor
-1.6
737
Tumor
-1.6
865
Tumor
-1.6
395
Tumor
-1.6
523
Tumor
-1.7
724
Normal
-1.8
777
Tumor
-1.9
311
Tumor
-1.9
385
Tumor
-2.1
661
Tumor
-2.2
375
Tumor
-2.2
211
Tumor
-2.4
283
Tumor
-2.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.