HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:17.6 nTPM
HPA Brain:25.6 nTPM
GTEx:17.6 nTPM
FANTOM5:16.3 Scaled Tags Per Million
Pig:17.6 nTPM
Mouse:36.1 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001586
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.6
Sample id Sample description nTPM
Hippocampus
nTPM: 24.1
2148 Female, age 91, left hemisphere 26.2
2621 Female, age 67, right hemisphere 24.9
1898 Male, age 80, left hemisphere 24.7
1855 Male, age 76, left hemisphere 24.4
1911 Female, age 85, right hemisphere 22.7
2529 Female, age 94, left hemisphere 21.8
Dentate gyrus
nTPM: 23.9
2531 Female, age 67, both hemispheres 25.5
2010 Male, age 76, both hemispheres 25.2
1927 Female, age 91, both hemispheres 23.7
2528 Male, age 74, both hemispheres 23.5
2530 Female, age 94, left hemisphere 22.8
2246 Female, age 85, both hemispheres 22.4
Entorhinal gyrus
nTPM: 24.6
2764 Male, age 80, right hemisphere 28.0
2613 Female, age 94, left hemisphere 26.8
2686 Male, age 75, right hemisphere 24.2
1787 Male, age 76, left hemisphere 24.0
1938 Female, age 85, left hemisphere 23.2
2117 Female, age 91, right hemisphere 21.4
Hippocampus, CA1
nTPM: 25.3
2749 Male, age 80, left hemisphere 33.4
1873 Female, age 85, both hemispheres 24.8
2082 Female, age 91, right hemisphere 23.7
2527 Male, age 74, both hemispheres 23.1
2045 Male, age 76, both hemispheres 21.2
Hippocampus, CA2
nTPM: 24.3
1963 Male, age 80, left hemisphere 33.4
1892 Male, age 76, both hemispheres 27.4
2113 Female, age 91, right hemisphere 23.3
2249 Male, age 74, both hemispheres 20.9
2437 Female, age 94, left hemisphere 20.7
1940 Female, age 85, left hemisphere 20.4
Hippocampus, CA3
nTPM: 25.6
2620 Female, age 94, left hemisphere 30.5
2861 Female, age 67, both hemispheres 29.5
2137 Male, age 80, left hemisphere 28.0
1867 Male, age 76, both hemispheres 24.7
1891 Female, age 85, both hemispheres 20.7
2436 Male, age 74, both hemispheres 19.9
Parahippocampal cortex
nTPM: 22.8
1933 Female, age 85, both hemispheres 24.4
2245 Female, age 91, both hemispheres 23.4
2532 Female, age 72, left hemisphere 23.2
1850 Male, age 80, both hemispheres 23.1
2622 Female, age 67, right hemisphere 23.1
2693 Female, age 94, both hemispheres 22.7
1990 Female, age 91, right hemisphere 22.5
2250 Female, age 67, right hemisphere 22.1
2692 Male, age 74, both hemispheres 22.1
2018 Male, age 76, both hemispheres 21.1
Perirhinal gyrus
nTPM: 23.4
1847 Female, age 91, left hemisphere 25.1
1794 Male, age 80, right hemisphere 24.4
2521 Female, age 94, right hemisphere 22.9
2848 Male, age 76, right hemisphere 22.6
1841 Female, age 85, right hemisphere 22.0
Subiculum
nTPM: 22.5
2042 Male, age 76, both hemispheres 23.9
1977 Female, age 85, both hemispheres 23.8
2729 Female, age 91, right hemisphere 23.8
1901 Male, age 80, both hemispheres 22.1
2619 Male, age 74, both hemispheres 21.8
2438 Female, age 94, left hemisphere 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.6
Samples: 197

Max nTPM: 49.3
Min nTPM: 7.2
Std nTPM: 6.1
Median nTPM: 16.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 43.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 38.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 37.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 36.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 32.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 29.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 29.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 28.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 28.4
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 28.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.3
FF:10153-102I9 76 years, female 26.4
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 17.6
Pig sample Sample description nTPM
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.0
Sample A Female 20.0
Sample B Female 14.2
Sample C Male 13.1
Sample D Male 12.0
Dorsal hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 23.9
Min nTPM: 12.6
Sample A Female 23.9
Sample B Female 19.5
Sample C Male 14.5
Sample D Male 12.6
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.1
Min nTPM: 11.6
Sample A Female 15.1
Sample B Female 15.0
Sample C Male 14.4
Sample D Male 11.6
Ventral hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.1
Sample A Female 16.8
Sample B Female 13.1
Sample C Male 18.2
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.1
Samples: 4

Max nTPM: 38.6
Min nTPM: 30.8
Sample A Male 30.8
Sample B Male 34.0
Sample C Female 33.1
Sample D Female 38.6
Hippocampal formation
nTPM: 36.1
Samples: 4

Max nTPM: 39.8
Min nTPM: 33.8
Sample A Male 35.6
Sample B Male 35.2
Sample C Female 39.8
Sample D Female 33.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
68269706 Antisense, RP_041129_02_A12, Mouse strain C57BL/6J (56 days, male) 6.5

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