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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.1
nTPM
HPA Brain:
19.1
nTPM
GTEx:
21.1
nTPM
FANTOM5:
32.6
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
19.1
Sample id
Sample description
nTPM
Amygdala nTPM: 19.1
2695
Female, age 67, right hemisphere
22.9
2814
Male, age 76, right hemisphere
21.1
2517
Female, age 94, left hemisphere
17.5
1987
Female, age 91, left hemisphere
17.4
2514
Male, age 75, right hemisphere
16.7
Basal amygdala nTPM: 17.7
2609
Male, age 75, right hemisphere
20.9
1955
Male, age 76, both hemispheres
19.8
2685
Female, age 94, left hemisphere
18.5
2110
Male, age 80, left hemisphere
17.6
2243
Female, age 91, right hemisphere
15.3
2827
Female, age 67, right hemisphere
13.8
Central amygdala nTPM: 18.4
2515
Male, age 75, right hemisphere
20.8
2826
Female, age 94, left hemisphere
20.2
2701
Female, age 91, right hemisphere
17.4
1905
Male, age 76, both hemispheres
17.2
2239
Male, age 80, left hemisphere
16.3
Corticomedial amygdala nTPM: 18.5
2428
Male, age 75, right hemisphere
21.4
2240
Male, age 76, both hemispheres
18.7
2829
Male, age 80, left hemisphere
18.6
2535
Female, age 67, right hemisphere
18.1
2242
Female, age 91, right hemisphere
17.2
2429
Female, age 94, left hemisphere
17.1
Lateral amygdala nTPM: 16.7
1883
Male, age 76, both hemispheres
18.4
2516
Male, age 75, right hemisphere
17.4
2534
Female, age 94, left hemisphere
17.0
2256
Male, age 80, left hemisphere
16.7
2830
Female, age 67, right hemisphere
16.7
2255
Female, age 91, right hemisphere
14.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 21.1
Samples: 152
Max nTPM: 48.9
Min nTPM: 9.3
Std nTPM: 6.4
Median nTPM: 19.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
48.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
44.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
43.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
41.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
41.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
35.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
32.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
32.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
31.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
31.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
30.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
30.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
29.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
27.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
27.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
27.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
27.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
27.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
27.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
26.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
26.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
26.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
26.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
26.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
26.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
26.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
25.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
25.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
25.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
25.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
25.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
25.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
25.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
25.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
24.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
24.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
24.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
24.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
24.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
24.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
24.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
24.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
23.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
23.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
23.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
23.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
23.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
23.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
23.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
22.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
22.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
22.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
22.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
22.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
22.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
22.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
22.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
22.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
22.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
22.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
21.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
21.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
21.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
21.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
21.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
21.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
20.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
20.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
20.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
20.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
20.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
20.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
19.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
19.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
19.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
19.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
19.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
19.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
19.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
19.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
19.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
19.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
19.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
18.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
18.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
18.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
18.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
18.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
18.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
18.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
18.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
18.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
18.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
18.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
18.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
18.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
18.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
18.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
17.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
17.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
17.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
17.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
17.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
17.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
17.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
17.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
17.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
17.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
17.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
16.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
16.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
16.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
16.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
16.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
16.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
16.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
16.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
16.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
15.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
15.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
15.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
15.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
15.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
15.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
15.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
15.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
15.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
15.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
15.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
15.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
14.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
14.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
14.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
14.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
14.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
14.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
14.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
14.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
14.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
14.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
13.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
13.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
13.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
13.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
13.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
12.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
12.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
10.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
9.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
9.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.