HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.0 nTPM
HPA Brain:14.7 nTPM
GTEx:5.0 nTPM
FANTOM5:2.3 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:13.7 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.5
1911 Female, age 85, right hemisphere 18.1
2621 Female, age 67, right hemisphere 17.8
2529 Female, age 94, left hemisphere 12.3
1898 Male, age 80, left hemisphere 9.6
1855 Male, age 76, left hemisphere 8.6
2148 Female, age 91, left hemisphere 8.5
Dentate gyrus
nTPM: 10.1
2246 Female, age 85, both hemispheres 12.3
1927 Female, age 91, both hemispheres 12.1
2530 Female, age 94, left hemisphere 9.9
2528 Male, age 74, both hemispheres 9.3
2531 Female, age 67, both hemispheres 9.1
2010 Male, age 76, both hemispheres 8.1
Entorhinal gyrus
nTPM: 11.7
2613 Female, age 94, left hemisphere 17.2
2686 Male, age 75, right hemisphere 16.3
2764 Male, age 80, right hemisphere 10.9
1938 Female, age 85, left hemisphere 10.1
2117 Female, age 91, right hemisphere 8.3
1787 Male, age 76, left hemisphere 7.5
Hippocampus, CA1
nTPM: 13.1
2749 Male, age 80, left hemisphere 21.8
2527 Male, age 74, both hemispheres 17.2
1873 Female, age 85, both hemispheres 10.7
2045 Male, age 76, both hemispheres 8.2
2082 Female, age 91, right hemisphere 7.7
Hippocampus, CA2
nTPM: 9.8
2249 Male, age 74, both hemispheres 12.1
1963 Male, age 80, left hemisphere 12.0
2113 Female, age 91, right hemisphere 9.5
2437 Female, age 94, left hemisphere 9.5
1892 Male, age 76, both hemispheres 8.3
1940 Female, age 85, left hemisphere 7.5
Hippocampus, CA3
nTPM: 14.7
2137 Male, age 80, left hemisphere 26.8
1891 Female, age 85, both hemispheres 13.8
2436 Male, age 74, both hemispheres 12.9
2861 Female, age 67, both hemispheres 12.8
1867 Male, age 76, both hemispheres 11.5
2620 Female, age 94, left hemisphere 10.5
Parahippocampal cortex
nTPM: 13.1
2245 Female, age 91, both hemispheres 19.8
2532 Female, age 72, left hemisphere 17.4
2622 Female, age 67, right hemisphere 14.9
2250 Female, age 67, right hemisphere 14.6
2692 Male, age 74, both hemispheres 14.4
2693 Female, age 94, both hemispheres 11.3
1990 Female, age 91, right hemisphere 10.3
1850 Male, age 80, both hemispheres 10.2
1933 Female, age 85, both hemispheres 9.8
2018 Male, age 76, both hemispheres 8.8
Perirhinal gyrus
nTPM: 9.9
2521 Female, age 94, right hemisphere 12.3
1847 Female, age 91, left hemisphere 11.6
1841 Female, age 85, right hemisphere 10.2
1794 Male, age 80, right hemisphere 8.4
2848 Male, age 76, right hemisphere 7.2
Subiculum
nTPM: 12.1
1901 Male, age 80, both hemispheres 15.5
2619 Male, age 74, both hemispheres 14.2
2438 Female, age 94, left hemisphere 13.6
1977 Female, age 85, both hemispheres 11.2
2042 Male, age 76, both hemispheres 11.1
2729 Female, age 91, right hemisphere 7.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.0
Samples: 197

Max nTPM: 16.9
Min nTPM: 0.8
Std nTPM: 3.0
Median nTPM: 4.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 16.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 14.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 12.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 12.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 12.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 12.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 12.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 12.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 11.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 11.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 11.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2.3
FF:10153-102I9 76 years, female 2.7
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.5
Pig sample Sample description nTPM
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 28.5
Min nTPM: 21.9
Sample A Female 28.5
Sample B Female 21.9
Sample C Male 26.1
Sample D Male 25.4
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 24.1
Min nTPM: 16.0
Sample A Female 23.3
Sample B Female 22.3
Sample C Male 24.1
Sample D Male 16.0
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 27.4
Min nTPM: 20.8
Sample A Female 22.6
Sample B Female 20.8
Sample C Male 26.4
Sample D Male 27.4
Ventral hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 33.8
Min nTPM: 18.2
Sample A Female 18.5
Sample B Female 18.2
Sample C Male 24.2
Sample D Male 33.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.4
Sample A Male 12.4
Sample B Male 12.5
Sample C Female 13.2
Sample D Female 16.2
Hippocampal formation
nTPM: 13.7
Samples: 4

Max nTPM: 14.3
Min nTPM: 12.8
Sample A Male 13.9
Sample B Male 14.3
Sample C Female 13.8
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
69608507 Antisense, RP_050426_04_C03, Mouse strain C57BL/6J (56 days, male) 5.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org