HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.5 nTPM
HPA Brain:18.5 nTPM
GTEx:3.5 nTPM
FANTOM5:34.6 Scaled Tags Per Million
Pig:8.2 nTPM
Mouse:8.1 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022872
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.5
Sample id Sample description nTPM
Hippocampus
nTPM: 16.7
2148 Female, age 91, left hemisphere 18.5
2621 Female, age 67, right hemisphere 18.2
1911 Female, age 85, right hemisphere 17.5
2529 Female, age 94, left hemisphere 16.9
1855 Male, age 76, left hemisphere 16.2
1898 Male, age 80, left hemisphere 12.9
Dentate gyrus
nTPM: 18.2
2530 Female, age 94, left hemisphere 22.9
2531 Female, age 67, both hemispheres 22.6
2246 Female, age 85, both hemispheres 18.7
2528 Male, age 74, both hemispheres 15.8
2010 Male, age 76, both hemispheres 15.5
1927 Female, age 91, both hemispheres 13.9
Entorhinal gyrus
nTPM: 18.4
2613 Female, age 94, left hemisphere 22.8
2764 Male, age 80, right hemisphere 22.4
2686 Male, age 75, right hemisphere 21.0
1938 Female, age 85, left hemisphere 15.1
2117 Female, age 91, right hemisphere 15.1
1787 Male, age 76, left hemisphere 14.0
Hippocampus, CA1
nTPM: 16.2
2045 Male, age 76, both hemispheres 18.0
2082 Female, age 91, right hemisphere 17.7
1873 Female, age 85, both hemispheres 16.7
2527 Male, age 74, both hemispheres 14.7
2749 Male, age 80, left hemisphere 13.8
Hippocampus, CA2
nTPM: 16.6
1940 Female, age 85, left hemisphere 18.3
2437 Female, age 94, left hemisphere 18.3
2249 Male, age 74, both hemispheres 17.0
1892 Male, age 76, both hemispheres 15.7
2113 Female, age 91, right hemisphere 15.4
1963 Male, age 80, left hemisphere 14.7
Hippocampus, CA3
nTPM: 17.7
2620 Female, age 94, left hemisphere 28.2
2861 Female, age 67, both hemispheres 19.2
1891 Female, age 85, both hemispheres 18.3
1867 Male, age 76, both hemispheres 14.2
2436 Male, age 74, both hemispheres 13.4
2137 Male, age 80, left hemisphere 12.8
Parahippocampal cortex
nTPM: 17.6
2622 Female, age 67, right hemisphere 22.6
2532 Female, age 72, left hemisphere 22.3
2693 Female, age 94, both hemispheres 18.8
2692 Male, age 74, both hemispheres 18.1
2018 Male, age 76, both hemispheres 17.3
2245 Female, age 91, both hemispheres 16.3
1990 Female, age 91, right hemisphere 16.1
1850 Male, age 80, both hemispheres 15.5
1933 Female, age 85, both hemispheres 15.0
2250 Female, age 67, right hemisphere 14.4
Perirhinal gyrus
nTPM: 14.9
2848 Male, age 76, right hemisphere 19.3
1841 Female, age 85, right hemisphere 15.4
2521 Female, age 94, right hemisphere 14.6
1794 Male, age 80, right hemisphere 14.3
1847 Female, age 91, left hemisphere 11.2
Subiculum
nTPM: 18.5
2042 Male, age 76, both hemispheres 22.8
1977 Female, age 85, both hemispheres 20.0
1901 Male, age 80, both hemispheres 18.4
2438 Female, age 94, left hemisphere 17.8
2729 Female, age 91, right hemisphere 16.5
2619 Male, age 74, both hemispheres 15.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.5
Samples: 197

Max nTPM: 10.0
Min nTPM: 0.6
Std nTPM: 1.8
Median nTPM: 3.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 10.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 9.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 8.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 8.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 8.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 7.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 7.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 7.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 7.2
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 7.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 7.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.6
FF:10153-102I9 76 years, female 48.5
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 8.2
Pig sample Sample description nTPM
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.0
Sample A Female 9.0
Sample B Female 7.9
Sample C Male 7.3
Sample D Male 6.0
Dorsal hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.0
Sample A Female 7.8
Sample B Female 7.3
Sample C Male 9.8
Sample D Male 6.0
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.4
Sample A Female 7.2
Sample B Female 8.7
Sample C Male 6.4
Sample D Male 10.5
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 7.0
Sample C Male 8.4
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 7.8
Min nTPM: 7.0
Sample A Male 7.4
Sample B Male 7.8
Sample C Female 7.6
Sample D Female 7.0
Hippocampal formation
nTPM: 8.1
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.7
Sample A Male 7.9
Sample B Male 9.2
Sample C Female 7.7
Sample D Female 7.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
71892298 Antisense, RP_051012_01_E09, Mouse strain C57BL/6J (56 days, male) 10.9

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