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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARL4C is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
141.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
115.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
55.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
53.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
53.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
35.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
34.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
34.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
33.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
29.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
26.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
26.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
25.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
25.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
23.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
23.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
20.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
20.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
18.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
18.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
17.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
16.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
16.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
16.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
16.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
15.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
14.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
13.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
13.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
11.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
11.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
10.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
10.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
9.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
7.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
7.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
6.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
6.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
6.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
5.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
5.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
5.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
4.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
4.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
4.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
4.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
4.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
4.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
4.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
4.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
4.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
4.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
4.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
3.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
3.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
3.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
3.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
3.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
3.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
3.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
3.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
2.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
2.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
2.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
2.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
2.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
2.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
2.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
2.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
2.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
2.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
2.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
2.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
2.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
1.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
0.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
0.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARL4C is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.5
Number of samples
231
Samples
Sample
Description
TPM
DO45307
0 years, female, NA, stage:4, dead, 240 days
117.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
104.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
92.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
76.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
73.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
66.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
55.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
50.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
48.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
42.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
40.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
40.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
39.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
33.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
32.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
31.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
31.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
29.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
27.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
26.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
24.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
22.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
22.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
22.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
22.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
21.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
21.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
20.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
20.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
20.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
19.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
17.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
17.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
16.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
15.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
15.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
15.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
15.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
15.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
13.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
13.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
13.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
13.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
13.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
9.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
8.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
7.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
6.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
6.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
5.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
4.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
4.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
4.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
4.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
4.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
4.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
3.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
3.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
3.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
3.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
3.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
3.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
2.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
2.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
2.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
2.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
2.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
2.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
2.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
2.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
2.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
2.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
2.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
2.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
2.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
2.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
2.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
2.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
2.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
2.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
1.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
1.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
1.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
1.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
1.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
1.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
0.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
283
Tumor
1.5
698
Normal
1.3
881
Tumor
1.3
742
Normal
1.1
466
Normal
1.1
817
Tumor
1.1
723
Tumor
1.0
738
Normal
1.0
448
Normal
0.9
211
Tumor
0.8
857
Tumor
0.8
461
Tumor
0.7
468
Normal
0.7
924
Normal
0.7
926
Normal
0.7
393
Tumor
0.7
391
Tumor
0.6
464
Normal
0.6
452
Normal
0.6
922
Normal
0.6
1043
Tumor
0.6
851
Tumor
0.6
1046
Normal
0.6
823
Tumor
0.6
923
Tumor
0.6
918
Normal
0.6
386
Normal
0.6
943
Tumor
0.5
953
Tumor
0.5
385
Tumor
0.5
916
Normal
0.5
1045
Tumor
0.5
394
Normal
0.5
388
Normal
0.4
478
Normal
0.4
1044
Normal
0.4
387
Tumor
0.4
456
Normal
0.4
984
Normal
0.3
815
Tumor
0.3
471
Tumor
0.3
536
Normal
0.3
224
Normal
0.3
877
Tumor
0.3
913
Tumor
0.3
728
Normal
0.3
744
Normal
0.2
983
Tumor
0.2
697
Tumor
0.2
883
Tumor
0.2
473
Tumor
0.1
482
Normal
0.1
285
Tumor
0.1
472
Normal
0.1
884
Normal
0.1
284
Normal
0.1
912
Normal
0.1
447
Tumor
0.1
917
Tumor
0.1
852
Normal
0.1
921
Tumor
0.1
956
Normal
0.1
286
Normal
0.1
223
Tumor
0.1
462
Normal
0.1
925
Tumor
0.0
818
Normal
0.0
978
Normal
0.0
477
Tumor
0.0
1016
Normal
0.0
982
Normal
0.0
474
Normal
0.0
954
Normal
0.0
535
Tumor
0.0
396
Normal
0.0
1014
Normal
0.0
938
Normal
0.0
212
Normal
0.0
1013
Tumor
0.0
741
Tumor
0.0
944
Normal
0.0
981
Tumor
-0.1
824
Normal
-0.1
481
Tumor
-0.1
228
Normal
-0.2
914
Normal
-0.2
858
Normal
-0.2
1015
Tumor
-0.2
952
Normal
-0.2
465
Tumor
-0.2
937
Tumor
-0.3
955
Tumor
-0.3
951
Tumor
-0.3
395
Tumor
-0.3
816
Normal
-0.4
977
Tumor
-0.4
392
Normal
-0.4
882
Normal
-0.4
915
Tumor
-0.5
878
Normal
-0.5
724
Normal
-0.7
227
Tumor
-0.9
727
Tumor
-1.0
911
Tumor
-1.0
467
Tumor
-1.2
737
Tumor
-1.6
455
Tumor
-1.8
451
Tumor
-2.1
463
Tumor
-2.4
743
Tumor
-2.6
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
271
Tumor
N/A
272
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
615
Tumor
N/A
616
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
864
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
515
Tumor
N/A
636
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
571
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
696
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
