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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIRT7 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
46.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
42.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
38.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
36.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
33.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
32.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
31.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
30.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
29.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
28.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
27.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
27.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
27.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
27.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
24.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
24.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
23.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
23.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
22.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
21.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
21.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
21.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
20.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
20.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
18.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
18.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
17.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
17.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
17.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
17.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
16.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
16.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
16.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
16.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
16.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
16.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
16.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
16.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
16.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
16.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
16.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
15.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
15.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
15.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
15.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
15.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
14.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
14.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
14.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
14.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
14.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
13.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
13.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
13.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
13.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
12.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
12.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
12.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
12.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
12.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
11.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
11.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
11.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
10.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
10.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
10.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
10.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
10.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
10.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
10.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
9.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
9.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
9.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
9.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
9.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
8.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
8.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
8.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
8.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
8.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
8.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
7.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
7.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
6.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
6.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
6.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
6.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
5.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
5.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
4.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
4.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
4.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
3.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
2.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIRT7 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
231
Samples
Sample
Description
TPM
DO45297
0 years, female, NA, stage:4, dead, 1260 days
73.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
55.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
55.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
55.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
52.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
47.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
45.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
42.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
41.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
40.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
39.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
39.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
38.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
37.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
34.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
34.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
31.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
31.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
31.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
31.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
29.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
28.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
28.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
28.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
28.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
28.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
26.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
25.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
25.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
25.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
24.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
24.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
23.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
23.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
23.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
22.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
21.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
21.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
21.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
21.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
21.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
21.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
20.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
20.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
20.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
20.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
19.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
19.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
19.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
19.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
19.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
19.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
18.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
18.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
18.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
18.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
18.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
17.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
17.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
17.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
17.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
17.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
16.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
16.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
16.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
16.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
16.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
15.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
15.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
15.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
14.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
14.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
14.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
14.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
14.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
14.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
13.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
13.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
13.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
12.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
12.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
12.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
12.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
11.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
11.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
11.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
11.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
11.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
10.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
10.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
10.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
7.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
6.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
6.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
4.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
366
Normal
1.4
533
Tumor
1.3
1015
Tumor
1.3
361
Tumor
1.1
368
Normal
1.1
978
Normal
1.0
666
Normal
1.0
262
Normal
1.0
222
Normal
1.0
1041
Tumor
1.0
984
Normal
0.9
956
Normal
0.9
983
Tumor
0.9
662
Normal
0.9
951
Tumor
0.9
952
Normal
0.9
362
Normal
0.9
357
Tumor
0.9
1013
Tumor
0.8
376
Normal
0.8
943
Tumor
0.8
196
Normal
0.8
384
Normal
0.8
977
Tumor
0.8
218
Normal
0.8
982
Normal
0.8
1016
Normal
0.7
1031
Tumor
0.7
672
Normal
0.7
741
Tumor
0.7
217
Tumor
0.7
1014
Normal
0.7
214
Normal
0.6
817
Tumor
0.6
648
Normal
0.6
258
Normal
0.6
191
Tumor
0.6
365
Tumor
0.6
257
Tumor
0.6
271
Tumor
0.6
953
Tumor
0.6
388
Normal
0.5
332
Normal
0.5
937
Tumor
0.5
477
Tumor
0.5
627
Tumor
0.5
432
Normal
0.5
1021
Tumor
0.5
938
Normal
0.5
664
Normal
0.5
446
Normal
0.5
195
Tumor
0.5
211
Tumor
0.5
727
Tumor
0.5
394
Normal
0.5
224
Normal
0.5
955
Tumor
0.4
954
Normal
0.4
574
Normal
0.4
436
Normal
0.4
268
Normal
0.4
386
Normal
0.4
387
Tumor
0.4
564
Normal
0.4
434
Normal
0.4
616
Normal
0.4
192
Normal
0.4
391
Tumor
0.4
221
Tumor
0.4
314
Normal
0.4
396
Normal
0.4
212
Normal
0.4
383
Tumor
0.4
395
Tumor
0.4
444
Normal
0.3
641
Tumor
0.3
661
Tumor
0.3
944
Normal
0.3
635
Tumor
0.3
724
Normal
0.3
957
Tumor
0.3
617
Tumor
0.3
431
Tumor
0.3
443
Tumor
0.3
267
Tumor
0.3
186
Normal
0.3
392
Normal
0.3
823
Tumor
0.3
353
Tumor
0.3
671
Tumor
0.3
568
Normal
0.3
433
Tumor
0.3
685
Tumor
0.3
534
Normal
0.3
393
Tumor
0.2
228
Normal
0.2
213
Tumor
0.2
497
Tumor
0.2
172
Normal
0.2
367
Tumor
0.2
435
Tumor
0.2
278
Normal
0.2
286
Normal
0.2
628
Normal
0.2
487
Tumor
0.2
261
Tumor
0.2
567
Tumor
0.2
343
Tumor
0.2
341
Tumor
0.1
965
Tumor
0.1
665
Tumor
0.1
465
Tumor
0.1
297
Tumor
0.1
728
Normal
0.1
148
Normal
0.1
385
Tumor
0.1
162
Normal
0.1
642
Normal
0.1
452
Normal
0.1
473
Tumor
0.1
526
Normal
0.1
573
Tumor
0.1
232
Normal
0.1
518
Normal
0.1
445
Tumor
0.1
663
Tumor
0.1
298
Normal
0.1
1027
Tumor
0.1
563
Tumor
0.1
285
Tumor
0.1
472
Normal
0.1
375
Tumor
0.1
467
Tumor
0.0
558
Normal
0.0
572
Normal
0.0
272
Normal
0.0
546
Normal
0.0
482
Normal
0.0
352
Normal
0.0
816
Normal
0.0
858
Normal
0.0
738
Normal
0.0
464
Normal
0.0
451
Tumor
0.0
223
Tumor
0.0
516
Normal
0.0
525
Tumor
0.0
227
Tumor
0.0
744
Normal
0.0
554
Normal
0.0
351
Tumor
0.0
818
Normal
0.0
527
Tumor
0.0
721
Tumor
0.0
111
Normal
0.0
852
Normal
0.0
312
Normal
0.0
618
Normal
0.0
498
Normal
-0.1
636
Normal
-0.1
524
Normal
-0.1
975
Tumor
-0.1
231
Tumor
-0.1
283
Tumor
-0.1
344
Normal
-0.1
123
Tumor
-0.1
488
Normal
-0.1
112
Tumor
-0.1
528
Normal
-0.1
737
Tumor
-0.1
515
Tumor
-0.1
647
Tumor
-0.1
723
Tumor
-0.1
331
Tumor
-0.1
494
Normal
-0.1
188
Normal
-0.1
478
Normal
-0.1
483
Tumor
-0.2
557
Tumor
-0.2
545
Tumor
-0.2
284
Normal
-0.2
553
Tumor
-0.2
114
Normal
-0.2
742
Normal
-0.2
538
Normal
-0.2
981
Tumor
-0.2
857
Tumor
-0.2
1042
Normal
-0.2
967
Tumor
-0.2
126
Normal
-0.2
493
Tumor
-0.2
127
Tumor
-0.2
976
Normal
-0.2
455
Tumor
-0.2
513
Tumor
-0.2
492
Normal
-0.2
571
Tumor
-0.2
615
Tumor
-0.3
138
Normal
-0.3
461
Tumor
-0.3
185
Tumor
-0.3
128
Normal
-0.3
187
Tumor
-0.3
824
Normal
-0.3
474
Normal
-0.3
113
Tumor
-0.3
713
Tumor
-0.3
815
Tumor
-0.3
963
Tumor
-0.3
147
Tumor
-0.3
146
Normal
-0.3
716
Normal
-0.3
141
Tumor
-0.3
484
Normal
-0.3
686
Normal
-0.3
342
Normal
-0.3
466
Normal
-0.3
714
Normal
-0.3
277
Tumor
-0.3
171
Tumor
-0.3
491
Tumor
-0.3
136
Normal
-0.3
124
Normal
-0.4
537
Tumor
-0.4
715
Tumor
-0.4
161
Tumor
-0.4
1022
Normal
-0.4
966
Normal
-0.4
514
Normal
-0.4
1025
Tumor
-0.4
722
Normal
-0.4
523
Tumor
-0.4
964
Normal
-0.4
468
Normal
-0.4
313
Tumor
-0.4
851
Tumor
-0.4
354
Normal
-0.4
471
Tumor
-0.4
456
Normal
-0.5
311
Tumor
-0.5
358
Normal
-0.5
695
Tumor
-0.5
145
Tumor
-0.5
137
Tumor
-0.5
132
Normal
-0.5
1028
Normal
-0.5
142
Normal
-0.5
958
Normal
-0.6
696
Normal
-0.6
743
Tumor
-0.6
463
Tumor
-0.6
481
Tumor
-0.6
517
Tumor
-0.6
968
Normal
-0.7
462
Normal
-0.7
135
Tumor
-0.8
131
Tumor
-0.8
125
Tumor
-0.8
1026
Normal
-0.9
1032
Normal
-1.2
355
Tumor
N/A
356
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
1046
Normal
N/A
864
Normal
N/A
1045
Tumor
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
755
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
883
Tumor
N/A
884
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
447
Tumor
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
697
Tumor
N/A
698
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
