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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HEXIM1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
47.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
43.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
41.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
38.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
37.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
36.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
34.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
33.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
31.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
28.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
28.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
27.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
27.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
27.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
25.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
25.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
24.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
24.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
23.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
23.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
23.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
22.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
22.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
21.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
21.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
21.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
21.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
20.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
20.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
19.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
19.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
18.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
18.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
18.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
17.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
17.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
17.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
17.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
17.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
17.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
17.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
17.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
16.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
16.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
16.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
15.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
15.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
15.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
15.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
15.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
14.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
14.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
14.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
14.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
14.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
14.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
14.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
14.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
14.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
14.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
13.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
13.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
13.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
13.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
13.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
13.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
13.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
13.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
13.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
13.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
13.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
12.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
12.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
12.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
11.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
11.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
11.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
11.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
11.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
11.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
10.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
10.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
10.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
9.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
9.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
9.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
8.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
8.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
8.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
8.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
7.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
7.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
6.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
6.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
6.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
5.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
5.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
5.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
4.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
4.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
4.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
4.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
3.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
3.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HEXIM1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
231
Samples
Sample
Description
TPM
DO50815
0 years, male, NA, stage:3, alive, 150 days
66.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
40.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
32.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
28.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
27.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
25.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
23.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
23.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
23.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
22.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
22.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
22.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
22.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
22.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
21.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
21.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
20.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
20.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
19.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
19.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
19.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
18.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
18.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
17.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
17.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
16.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
16.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
16.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
14.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
14.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
14.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
14.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
14.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
14.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
14.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
14.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
13.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
13.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
13.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
12.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
12.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
12.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
12.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
12.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
12.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
11.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
11.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
10.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
10.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
10.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
9.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
9.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
9.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
8.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
7.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
6.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
5.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
5.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
5.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
4.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
3.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
1.4
957
Tumor
1.3
741
Tumor
1.3
357
Tumor
1.3
355
Tumor
1.3
967
Tumor
1.0
777
Tumor
1.0
743
Tumor
0.9
695
Tumor
0.9
131
Tumor
0.9
461
Tumor
0.8
727
Tumor
0.8
537
Tumor
0.8
883
Tumor
0.7
1013
Tumor
0.7
393
Tumor
0.7
311
Tumor
0.7
571
Tumor
0.7
965
Tumor
0.7
423
Tumor
0.6
983
Tumor
0.6
411
Tumor
0.6
367
Tumor
0.6
785
Tumor
0.6
685
Tumor
0.6
953
Tumor
0.6
663
Tumor
0.6
527
Tumor
0.5
513
Tumor
0.5
473
Tumor
0.5
955
Tumor
0.5
554
Normal
0.5
515
Tumor
0.5
523
Tumor
0.5
161
Tumor
0.5
525
Tumor
0.5
361
Tumor
0.4
258
Normal
0.4
737
Tumor
0.4
873
Tumor
0.4
813
Tumor
0.4
462
Normal
0.4
283
Tumor
0.4
285
Tumor
0.4
257
Tumor
0.4
535
Tumor
0.4
863
Tumor
0.4
545
Tumor
0.4
981
Tumor
0.3
912
Normal
0.3
698
Normal
0.3
922
Normal
0.3
484
Normal
0.3
964
Normal
0.3
277
Tumor
0.3
615
Tumor
0.3
488
Normal
0.3
958
Normal
0.3
721
Tumor
0.3
387
Tumor
0.3
413
Tumor
0.3
222
Normal
0.3
926
Normal
0.3
877
Tumor
0.3
917
Tumor
0.3
1032
Normal
0.3
714
Normal
0.3
938
Normal
0.3
328
Normal
0.3
1016
Normal
0.3
464
Normal
0.2
858
Normal
0.2
364
Normal
0.2
786
Normal
0.2
918
Normal
0.2
923
Tumor
0.2
482
Normal
0.2
431
Tumor
0.2
814
Normal
0.2
884
Normal
0.2
966
Normal
0.2
824
Normal
0.2
943
Tumor
0.2
647
Tumor
0.2
356
Normal
0.2
627
Tumor
0.2
478
Normal
0.2
412
Normal
0.2
365
Tumor
0.2
455
Tumor
0.2
713
Tumor
0.2
518
Normal
0.2
465
Tumor
0.2
882
Normal
0.2
342
Normal
0.2
416
Normal
0.2
428
Normal
0.2
868
Normal
0.2
925
Tumor
0.2
862
Normal
0.2
815
Tumor
0.2
186
Normal
0.2
448
Normal
0.2
756
Normal
0.2
616
Normal
0.2
414
Normal
0.2
874
Normal
0.2
716
Normal
0.2
742
Normal
0.2
628
Normal
0.2
968
Normal
0.2
916
Normal
0.2
952
Normal
0.2
497
Tumor
0.2
358
Normal
0.2
516
Normal
0.2
738
Normal
0.2
424
Normal
0.2
686
Normal
0.2
394
Normal
0.2
472
Normal
0.2
456
Normal
0.2
878
Normal
0.2
272
Normal
0.2
268
Normal
0.2
426
Normal
0.2
1046
Normal
0.2
1042
Normal
0.2
331
Tumor
0.2
162
Normal
0.2
567
Tumor
0.2
728
Normal
0.2
954
Normal
0.2
395
Tumor
0.2
388
Normal
0.1
866
Normal
0.1
467
Tumor
0.1
353
Tumor
0.1
867
Tumor
0.1
636
Normal
0.1
136
Normal
0.1
944
Normal
0.1
436
Normal
0.1
492
Normal
0.1
574
Normal
0.1
452
Normal
0.1
298
Normal
0.1
137
Tumor
0.1
421
Tumor
0.1
976
Normal
0.1
172
Normal
0.1
332
Normal
0.1
312
Normal
0.1
696
Normal
0.1
823
Tumor
0.1
852
Normal
0.1
778
Normal
0.1
466
Normal
0.1
432
Normal
0.1
284
Normal
0.1
528
Normal
0.1
1045
Tumor
0.1
351
Tumor
0.1
534
Normal
0.1
1028
Normal
0.1
723
Tumor
0.1
142
Normal
0.1
262
Normal
0.1
422
Normal
0.1
546
Normal
0.1
661
Tumor
0.1
553
Tumor
0.1
524
Normal
0.1
278
Normal
0.1
864
Normal
0.1
924
Normal
0.1
664
Normal
0.1
1021
Tumor
0.1
211
Tumor
0.1
648
Normal
0.1
218
Normal
0.1
212
Normal
0.1
1022
Normal
0.1
138
Normal
0.1
232
Normal
0.1
618
Normal
0.1
722
Normal
0.1
483
Tumor
0.1
982
Normal
0.1
392
Normal
0.1
493
Tumor
0.1
697
Tumor
0.1
146
Normal
0.1
344
Normal
0.1
956
Normal
0.1
297
Tumor
0.1
171
Tumor
0.1
444
Normal
0.1
536
Normal
0.1
487
Tumor
0.1
881
Tumor
0.1
434
Normal
0.1
195
Tumor
0.1
558
Normal
0.1
362
Normal
0.1
564
Normal
0.0
386
Normal
0.0
141
Tumor
0.0
914
Normal
0.0
385
Tumor
0.0
568
Normal
0.0
376
Normal
0.0
963
Tumor
0.0
267
Tumor
0.0
494
Normal
0.0
286
Normal
0.0
148
Normal
0.0
341
Tumor
0.0
354
Normal
0.0
224
Normal
0.0
314
Normal
0.0
447
Tumor
0.0
861
Tumor
0.0
228
Normal
0.0
214
Normal
0.0
396
Normal
0.0
352
Normal
0.0
196
Normal
0.0
446
Normal
0.0
343
Tumor
0.0
672
Normal
0.0
865
Tumor
0.0
715
Tumor
0.0
557
Tumor
0.0
463
Tumor
0.0
188
Normal
0.0
231
Tumor
0.0
1031
Tumor
0.0
213
Tumor
0.0
526
Normal
0.0
514
Normal
0.0
185
Tumor
0.0
563
Tumor
0.0
474
Normal
0.0
443
Tumor
0.0
978
Normal
0.0
261
Tumor
0.0
498
Normal
0.0
744
Normal
0.0
114
Normal
0.0
915
Tumor
0.0
572
Normal
0.0
112
Tumor
0.0
1026
Normal
0.0
368
Normal
0.0
984
Normal
-0.1
1014
Normal
-0.1
666
Normal
-0.1
481
Tumor
-0.1
746
Normal
-0.1
818
Normal
-0.1
192
Normal
-0.1
468
Normal
-0.1
1044
Normal
-0.1
445
Tumor
-0.1
123
Tumor
-0.1
451
Tumor
-0.1
366
Normal
-0.1
617
Tumor
-0.1
415
Tumor
-0.1
383
Tumor
-0.1
135
Tumor
-0.1
1027
Tumor
-0.1
816
Normal
-0.1
187
Tumor
-0.1
427
Tumor
-0.1
132
Normal
-0.1
391
Tumor
-0.1
128
Normal
-0.1
662
Normal
-0.1
145
Tumor
-0.1
384
Normal
-0.1
1025
Tumor
-0.1
573
Tumor
-0.2
217
Tumor
-0.2
111
Normal
-0.2
327
Tumor
-0.2
433
Tumor
-0.2
538
Normal
-0.2
313
Tumor
-0.2
857
Tumor
-0.2
126
Normal
-0.2
913
Tumor
-0.2
517
Tumor
-0.2
491
Tumor
-0.2
124
Normal
-0.2
642
Normal
-0.2
363
Tumor
-0.2
435
Tumor
-0.3
1043
Tumor
-0.3
471
Tumor
-0.3
641
Tumor
-0.3
191
Tumor
-0.3
477
Tumor
-0.3
665
Tumor
-0.3
921
Tumor
-0.3
817
Tumor
-0.3
375
Tumor
-0.3
271
Tumor
-0.3
977
Tumor
-0.4
227
Tumor
-0.4
125
Tumor
-0.4
1041
Tumor
-0.4
911
Tumor
-0.4
937
Tumor
-0.4
671
Tumor
-0.4
755
Tumor
-0.4
1015
Tumor
-0.5
223
Tumor
-0.5
635
Tumor
-0.5
127
Tumor
-0.5
951
Tumor
-0.5
147
Tumor
-0.5
724
Normal
-0.5
113
Tumor
-0.5
221
Tumor
-0.6
745
Tumor
-0.6
851
Tumor
-0.6
975
Tumor
-0.7
425
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
