HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:12.9 nTPM
HPA Brain:45.7 nTPM
GTEx:12.9 nTPM
FANTOM5:47.4 Scaled Tags Per Million
Pig:6.7 nTPM
Mouse:10.6 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026087
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 39.0
1911 Female, age 85, right hemisphere 44.6
2529 Female, age 94, left hemisphere 44.6
2621 Female, age 67, right hemisphere 37.3
2148 Female, age 91, left hemisphere 36.9
1855 Male, age 76, left hemisphere 35.5
1898 Male, age 80, left hemisphere 35.2
Dentate gyrus
nTPM: 39.4
2010 Male, age 76, both hemispheres 44.0
2530 Female, age 94, left hemisphere 42.4
2528 Male, age 74, both hemispheres 39.4
2246 Female, age 85, both hemispheres 38.0
2531 Female, age 67, both hemispheres 36.5
1927 Female, age 91, both hemispheres 35.8
Entorhinal gyrus
nTPM: 39.6
2117 Female, age 91, right hemisphere 46.4
2686 Male, age 75, right hemisphere 40.9
2764 Male, age 80, right hemisphere 40.6
2613 Female, age 94, left hemisphere 39.4
1938 Female, age 85, left hemisphere 35.7
1787 Male, age 76, left hemisphere 34.5
Hippocampus, CA1
nTPM: 38.0
2527 Male, age 74, both hemispheres 41.8
2082 Female, age 91, right hemisphere 38.9
1873 Female, age 85, both hemispheres 38.8
2749 Male, age 80, left hemisphere 35.5
2045 Male, age 76, both hemispheres 34.9
Hippocampus, CA2
nTPM: 40.3
2437 Female, age 94, left hemisphere 43.3
1963 Male, age 80, left hemisphere 43.0
2113 Female, age 91, right hemisphere 42.3
2249 Male, age 74, both hemispheres 40.6
1940 Female, age 85, left hemisphere 39.3
1892 Male, age 76, both hemispheres 33.2
Hippocampus, CA3
nTPM: 36.2
1891 Female, age 85, both hemispheres 49.2
2436 Male, age 74, both hemispheres 37.5
2137 Male, age 80, left hemisphere 36.3
1867 Male, age 76, both hemispheres 35.0
2620 Female, age 94, left hemisphere 30.7
2861 Female, age 67, both hemispheres 28.5
Parahippocampal cortex
nTPM: 38.9
2692 Male, age 74, both hemispheres 50.5
2532 Female, age 72, left hemisphere 44.3
2018 Male, age 76, both hemispheres 42.2
1990 Female, age 91, right hemisphere 39.2
1850 Male, age 80, both hemispheres 38.6
2245 Female, age 91, both hemispheres 38.5
2693 Female, age 94, both hemispheres 36.7
1933 Female, age 85, both hemispheres 35.5
2250 Female, age 67, right hemisphere 32.4
2622 Female, age 67, right hemisphere 31.3
Perirhinal gyrus
nTPM: 33.3
2848 Male, age 76, right hemisphere 35.7
2521 Female, age 94, right hemisphere 35.2
1841 Female, age 85, right hemisphere 33.0
1847 Female, age 91, left hemisphere 32.3
1794 Male, age 80, right hemisphere 30.6
Subiculum
nTPM: 45.7
2438 Female, age 94, left hemisphere 52.2
1901 Male, age 80, both hemispheres 48.7
2042 Male, age 76, both hemispheres 48.0
1977 Female, age 85, both hemispheres 42.7
2619 Male, age 74, both hemispheres 42.0
2729 Female, age 91, right hemisphere 40.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 33.4
Min nTPM: 5.5
Std nTPM: 4.5
Median nTPM: 11.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 26.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 25.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 23.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 23.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 23.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 23.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 22.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 22.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 47.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.4
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 46.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.7
Pig sample Sample description nTPM
Subiculum
nTPM: 6.7
Samples: 4

Max nTPM: 6.9
Min nTPM: 6.4
Sample A Female 6.8
Sample B Female 6.4
Sample C Male 6.5
Sample D Male 6.9
Dorsal hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.1
Sample A Female 6.1
Sample B Female 6.1
Sample C Male 6.4
Sample D Male 7.5
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.5
Sample A Female 6.7
Sample B Female 6.6
Sample C Male 5.5
Sample D Male 6.9
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.5
Sample A Female 7.2
Sample B Female 7.2
Sample C Male 5.5
Sample D Male 6.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 10.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.8
Sample A Male 10.5
Sample B Male 11.9
Sample C Female 10.1
Sample D Female 9.8
Hippocampal formation
nTPM: 10.6
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.9
Sample A Male 10.6
Sample B Male 12.0
Sample C Female 10.0
Sample D Female 9.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68445913 Antisense, RP_050113_01_B09, Mouse strain C57BL/6J (56 days, male) 1.3

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