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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HPDL is not prognostic in Stomach Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.6
Number of samples
346
Samples
Sample
Description
TPM
TCGA-CD-8528-01A
0 years, female, asian, stage:Stage IIIA, alive, 375 days
87.5
TCGA-BR-6455-01A
0 years, male, white, stage:Stage IIB, dead, 422 days
55.5
TCGA-IN-A6RR-01A
0 years, male, white, stage:'--, dead, 205 days
46.4
TCGA-CD-8532-01A
0 years, male, asian, stage:Stage II, dead, 354 days
41.1
TCGA-R5-A7ZR-01A
0 years, female, black or african american, stage:Stage III, dead, 185 days
36.9
TCGA-VQ-A8PF-01A
0 years, male, stage:Stage IIIB, dead, 76 days
35.0
TCGA-D7-8573-01A
0 years, male, white, stage:Stage IIA, alive, 593 days
34.9
TCGA-CD-5801-01A
0 years, male, asian, stage:Stage IIIA, dead, 401 days
34.2
TCGA-BR-8369-01A
0 years, female, white, stage:Stage IIIB, alive, 427 days
32.4
TCGA-VQ-A91S-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1000 days
32.0
TCGA-VQ-A94R-01A
0 years, male, white, stage:'--, dead, 1294 days
31.2
TCGA-D7-8576-01A
0 years, female, white, stage:Stage IIIB, dead, 446 days
31.1
TCGA-D7-A4YX-01A
0 years, male, white, stage:Stage IIB, alive, 1108 days
30.9
TCGA-KB-A6F7-01A
0 years, female, stage:Stage IB, alive, 1935 days
30.8
TCGA-BR-8361-01A
0 years, female, white, stage:Stage IIIC, alive, 946 days
30.6
TCGA-VQ-A922-01A
0 years, male, stage:Stage IV, dead, 275 days
29.9
TCGA-BR-6565-01A
0 years, male, white, stage:Stage IIB, dead, 279 days
29.9
TCGA-VQ-A925-01A
0 years, male, white, stage:Stage IIIA, dead, 138 days
29.7
TCGA-SW-A7EB-01A
0 years, male, white, stage:Stage IIIA, alive, 176 days
28.8
TCGA-VQ-A8PE-01A
0 years, male, white, stage:Stage IIIB, dead, 675 days
28.4
TCGA-FP-7829-01A
0 years, male, white, stage:Stage IIB, alive, 594 days
28.2
TCGA-VQ-A91N-01A
0 years, female, stage:Stage IV, dead, 570 days
27.9
TCGA-HU-A4GU-01A
0 years, male, asian, stage:Stage IIB, alive, 200 days
27.7
TCGA-FP-A8CX-01A
0 years, male, white, stage:Stage IIIC, alive, 7 days
27.2
TCGA-VQ-A91U-01A
0 years, male, asian, stage:Stage IIIA, dead, 52 days
27.0
TCGA-HU-A4GC-01A
0 years, male, asian, stage:Stage IIIB, alive, 99 days
26.5
TCGA-VQ-A8PU-01A
0 years, female, white, stage:Stage IIIA, dead, 832 days
26.3
TCGA-FP-8099-01A
0 years, male, white, stage:Stage IIA, alive, 519 days
25.7
TCGA-MX-A663-01A
0 years, male, white, stage:Stage IIA, dead, 300 days
25.6
TCGA-D7-A6EV-01A
0 years, female, white, stage:Stage IIB, alive, 342 days
25.4
TCGA-BR-6707-01A
0 years, male, white, stage:Stage IIA, dead, 605 days
25.1
TCGA-CD-5800-01A
0 years, female, asian, stage:Stage II, alive, 400 days
24.9
TCGA-D7-6528-01A
0 years, female, white, stage:Stage IB, alive, 463 days
24.6
TCGA-VQ-AA68-01A
0 years, female, white, stage:Stage IIIC, alive, 1328 days
24.3
TCGA-F1-6874-01A
0 years, male, white, stage:Stage IB, alive, 440 days
24.3
TCGA-MX-A666-01A
0 years, male, white, stage:Stage IIA, alive, 427 days
24.3
TCGA-BR-7722-01A
0 years, male, white, stage:Stage IIB, dead, 466 days
24.0
TCGA-BR-8484-01A
0 years, male, white, stage:Stage IIIA, dead, 766 days
23.9
TCGA-BR-8485-01A
0 years, female, white, stage:Stage IIIC, alive, 280 days
23.8
TCGA-BR-6456-01A
0 years, female, white, stage:Stage IIB, dead, 526 days
23.5
TCGA-IP-7968-01A
0 years, male, white, stage:Stage IIIB, alive, 77 days
23.4
TCGA-BR-8295-01A
0 years, female, white, stage:Stage IIB, dead, 67 days
23.1
TCGA-RD-A7C1-01A
0 years, male, white, stage:Stage IB, dead, 507 days
22.1
TCGA-FP-8211-01A
0 years, male, white, stage:Stage IIB, alive, 413 days
22.0
TCGA-D7-5577-01A
0 years, female, white, stage:Stage IIIA, dead, 782 days
21.7
TCGA-HU-A4GF-01A
0 years, male, asian, stage:Stage IIA, alive, 785 days
21.4
TCGA-BR-8286-01A
0 years, male, white, stage:Stage II, alive, 895 days
21.2
TCGA-BR-6802-01A
0 years, male, white, stage:Stage IIIA, alive, 940 days
21.1
TCGA-CG-5724-01A
0 years, male, stage:Stage IV, dead, 366 days
21.0
TCGA-HU-A4GP-01A
0 years, female, asian, stage:Stage IIA, alive, 273 days
19.9
TCGA-HU-8602-01A
0 years, female, asian, stage:Stage IIB, alive, 679 days
19.8
TCGA-BR-8284-01A
0 years, female, white, stage:Stage IIIC, dead, 245 days
19.5
TCGA-D7-8572-01A
0 years, male, white, stage:Stage IIB, alive, 511 days
19.5
TCGA-BR-4267-01A
0 years, male, white, stage:Stage IB, dead, 188 days
19.4
TCGA-F1-A72C-01A
0 years, male, asian, stage:Stage IIA, alive, 346 days
19.4
TCGA-EQ-8122-01A
0 years, female, white, stage:Stage IIB, dead, 243 days
19.4
TCGA-BR-6452-01A
0 years, female, white, stage:Stage IIA, alive, 1055 days
19.2
TCGA-BR-A4J8-01A
0 years, female, white, stage:Stage IIIB, alive, 411 days
19.1
TCGA-VQ-AA6A-01A
0 years, male, white, stage:Stage IIIC, alive, 1184 days
19.0
TCGA-D7-8570-01A
0 years, male, white, stage:Stage IIIB, alive, 752 days
18.3
TCGA-D7-5578-01A
0 years, male, white, stage:Stage IIIA, alive, 385 days
18.0
TCGA-BR-7717-01A
0 years, male, white, stage:Stage IV, dead, 552 days
17.9
TCGA-HU-A4G2-01A
0 years, male, asian, stage:Stage IIB, alive, 739 days
17.6
TCGA-BR-4191-01A
0 years, male, white, stage:'--, dead, 558 days
17.6
TCGA-CD-5803-01A
0 years, female, asian, stage:Stage II, dead, 341 days
17.4
TCGA-BR-7716-01A
0 years, female, white, stage:Stage IIB, alive, 1210 days
17.3
TCGA-CG-4444-01A
0 years, male, stage:Stage IIIA, alive, 1431 days
17.2
TCGA-BR-4253-01A
0 years, female, white, stage:Stage IIIA, dead, 124 days
17.1
TCGA-BR-7196-01A
0 years, male, white, stage:Stage IV, alive, 666 days
16.8
TCGA-CG-4441-01A
0 years, male, stage:Stage IIIA, dead, 426 days
16.5
TCGA-HU-A4H2-01A
0 years, female, asian, stage:Stage IIIB, alive, 394 days
16.3
TCGA-IN-7806-01A
0 years, male, white, stage:Stage IIB, alive, 1106 days
16.1
TCGA-IN-A6RL-01A
0 years, male, white, stage:'--, dead, 406 days
16.1
TCGA-RD-A8MV-01A
0 years, male, white, stage:Stage IIIB, alive, 3720 days
15.9
TCGA-KB-A93H-01A
0 years, female, asian, stage:Stage IIB, alive, 1145 days
15.8
TCGA-RD-A7BT-01A
0 years, male, native hawaiian or other pacific islander, stage:Stage IV, dead, 262 days
15.6
TCGA-BR-6458-01A
0 years, female, white, stage:Stage IIB, dead, 588 days
15.5
TCGA-D7-A4YU-01A
0 years, male, white, stage:Stage IIIB, alive, 500 days
15.5
TCGA-HJ-7597-01A
0 years, female, white, stage:Stage IB, dead, 805 days
15.4
TCGA-HF-7133-01A
female, stage:Stage IV, alive, 1918 days
15.3
TCGA-BR-8382-01A
0 years, female, white, stage:Stage IIIC, dead, 762 days
15.2
TCGA-VQ-A91Z-01A
0 years, female, white, stage:Stage IIIA, alive, 1690 days
15.1
TCGA-BR-8680-01A
0 years, male, asian, stage:Stage IV, alive, 972 days
14.9
TCGA-BR-7197-01A
0 years, male, white, stage:Stage II, alive, 280 days
14.9
TCGA-VQ-A91K-01A
0 years, male, white, stage:Stage IIIA, alive, 1862 days
14.8
TCGA-BR-8380-01A
0 years, male, white, stage:Stage IIIC, dead, 21 days
14.6
TCGA-IN-A6RI-01A
0 years, male, white, stage:Stage I, alive, 559 days
14.5
TCGA-B7-A5TI-01A
0 years, male, white, stage:Stage IIIC, alive, 595 days
14.4
TCGA-HU-A4G9-01A
0 years, female, asian, stage:Stage IA, alive, 736 days
14.3
TCGA-CG-4437-01A
0 years, male, stage:Stage II, alive, 245 days
14.2
TCGA-BR-8676-01A
0 years, male, white, stage:Stage IIIB, alive, 229 days
14.1
TCGA-BR-8677-01A
0 years, female, white, stage:Stage IIIB, alive, 813 days
13.8
TCGA-CD-8526-01A
0 years, female, asian, stage:Stage IIIA, alive, 381 days
13.8
TCGA-D7-6527-01A
0 years, male, white, stage:Stage II, dead, 312 days
13.8
TCGA-VQ-A8PX-01A
0 years, male, stage:Stage IA, alive, 1964 days
13.7
TCGA-VQ-A8E3-01A
0 years, male, white, stage:Stage IIA, dead, 661 days
13.7
TCGA-VQ-A8DT-01A
0 years, male, stage:Stage IIIB, alive, 1484 days
13.5
TCGA-B7-A5TJ-01A
0 years, male, white, stage:Stage IIB, alive, 335 days
13.4
TCGA-CG-4466-01A
0 years, female, stage:Stage IB, alive, 577 days
13.3
TCGA-VQ-A8PO-01A
0 years, male, white, stage:Stage IIB, dead, 282 days
13.2
TCGA-CD-5799-01A
0 years, male, asian, stage:Stage II, alive, 396 days
13.1
TCGA-CD-A487-01A
0 years, male, asian, stage:Stage IIB, alive, 374 days
13.0
TCGA-ZQ-A9CR-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
12.9
TCGA-CG-5719-01A
0 years, female, stage:Stage IV, alive, 31 days
12.8
TCGA-BR-8683-01A
0 years, male, asian, stage:Stage IIIB, dead, 300 days
12.8
TCGA-HU-A4H4-01A
0 years, female, asian, stage:Stage IIB, alive, 725 days
12.6
TCGA-CD-8530-01A
0 years, male, asian, stage:Stage II, alive, 377 days
12.5
TCGA-HU-8238-01A
0 years, male, asian, stage:'--, alive, 46 days
12.4
TCGA-CG-5720-01A
0 years, male, stage:Stage IB, dead, 30 days
12.3
TCGA-KB-A93J-01A
0 years, male, white, stage:Stage II, alive, 1124 days
12.3
TCGA-IN-A6RS-01A
0 years, male, white, stage:Stage IA, alive, 383 days
12.1
TCGA-CD-A48C-01A
0 years, female, asian, stage:Stage IIB, dead, 353 days
12.0
TCGA-BR-8590-01A
0 years, male, white, stage:Stage IIIC, dead, 284 days
12.0
TCGA-VQ-A8PH-01A
0 years, male, white, stage:Stage IIIB, dead, 389 days
12.0
TCGA-BR-8368-01A
0 years, female, white, stage:Stage IB, alive, 131 days
11.9
TCGA-VQ-A92D-01A
0 years, male, white, stage:Stage IB, alive, 2032 days
11.9
TCGA-RD-A8N6-01A
0 years, female, white, stage:Stage IIIA, dead, 272 days
11.8
TCGA-CG-5726-01A
0 years, male, stage:Stage IA, dead, 881 days
11.6
TCGA-BR-8690-01A
0 years, female, white, stage:Stage IIIB, alive, 325 days
11.6
TCGA-VQ-AA6J-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 838 days
11.6
TCGA-FP-8631-01A
0 years, male, white, stage:Stage IIIA, alive, 17 days
11.5
TCGA-D7-6524-01A
0 years, male, white, stage:Stage II, alive, 543 days
11.5
TCGA-MX-A5UJ-01A
0 years, female, white, stage:Stage IIIA, alive, 600 days
11.4
TCGA-BR-8367-01A
0 years, male, white, stage:Stage IIIB, dead, 801 days
11.4
TCGA-D7-8575-01A
0 years, male, white, stage:Stage IIIA, dead, 554 days
11.3
TCGA-D7-8579-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
11.3
TCGA-FP-A4BF-01A
0 years, male, white, stage:Stage IIIA, dead, 168 days
11.3
TCGA-SW-A7EA-01A
0 years, female, white, stage:Stage IB, alive, 579 days
11.2
TCGA-D7-6815-01A
0 years, female, white, stage:Stage IIB, alive, 486 days
11.2
TCGA-HU-A4GX-01A
0 years, female, asian, stage:Stage IIIC, alive, 616 days
11.1
TCGA-VQ-A91X-01A
0 years, male, white, stage:Stage IIIB, dead, 289 days
11.0
TCGA-BR-A4PF-01A
0 years, male, white, stage:Stage IIIB, alive, 35 days
11.0
TCGA-FP-A9TM-01A
0 years, male, white, stage:'--, alive, 189 days
10.9
TCGA-FP-7998-01A
0 years, male, white, stage:Stage IIIC, alive, 678 days
10.9
TCGA-BR-7959-01A
0 years, male, white, stage:Stage IIIA, alive, 1010 days
10.9
TCGA-VQ-A94U-01A
0 years, male, white, stage:Stage IIB, alive, 819 days
10.8
TCGA-3M-AB46-01A
0 years, male, white, stage:Stage IB, alive, 1765 days
10.8
TCGA-VQ-A8P2-01A
0 years, male, white, stage:Stage IIIA, alive, 1160 days
10.7
TCGA-VQ-A91A-01A
0 years, male, white, stage:Stage IIIB, alive, 1200 days
10.7
TCGA-HU-A4GQ-01A
0 years, male, asian, stage:Stage IIIC, dead, 3 days
10.6
TCGA-D7-A6EY-01A
0 years, female, white, stage:Stage IIIB, dead, 348 days
10.5
TCGA-HU-A4G3-01A
0 years, male, asian, stage:Stage IIB, alive, 170 days
10.4
TCGA-CD-A48A-01A
0 years, male, asian, stage:Stage IIA, alive, 378 days
10.2
TCGA-HF-7134-01A
male, stage:Stage IA, alive, 1588 days
10.2
TCGA-HU-8604-01A
0 years, female, asian, stage:Stage IIA, alive, 694 days
10.2
TCGA-HU-A4H0-01A
0 years, male, asian, stage:Stage IIIC, alive, 64 days
10.2
TCGA-CD-8529-01A
0 years, male, asian, stage:Stage IV, alive, 374 days
10.0
TCGA-VQ-A91V-01A
0 years, male, stage:Stage IIIA, alive, 1297 days
9.8
TCGA-D7-6526-01A
0 years, female, white, stage:Stage IIIA, alive, 523 days
9.8
TCGA-HU-A4H3-01A
0 years, female, asian, stage:Stage IIIC, alive, 882 days
9.7
TCGA-VQ-A8DZ-01A
0 years, male, black or african american, stage:Stage IV, dead, 396 days
9.7
TCGA-RD-A8N1-01A
0 years, male, white, stage:Stage IIIB, alive, 3519 days
9.6
TCGA-VQ-AA64-01A
0 years, male, white, stage:Stage IIIB, dead, 560 days
9.6
TCGA-VQ-AA6F-01A
0 years, male, white, stage:Stage IIB, alive, 1646 days
9.4
TCGA-CG-4438-01A
0 years, male, stage:Stage IV, alive, 1645 days
9.4
TCGA-CG-4469-01A
0 years, male, stage:Stage IV, dead, 215 days
9.2
TCGA-D7-A6F0-01A
0 years, female, white, stage:Stage IB, alive, 678 days
9.2
TCGA-BR-6457-01A
0 years, male, white, stage:Stage IIA, alive, 416 days
9.1
TCGA-CD-A4MG-01A
0 years, male, asian, stage:Stage IIA, dead, 200 days
9.0
TCGA-R5-A7O7-01A
0 years, male, white, stage:Stage IV, alive, 1389 days
9.0
TCGA-BR-6705-01A
0 years, female, white, stage:Stage IIIB, dead, 779 days
8.8
TCGA-VQ-A924-01A
0 years, male, stage:Stage II, dead, 1686 days
8.8
TCGA-BR-8589-01A
0 years, male, white, stage:Stage IIIB, alive, 825 days
8.6
TCGA-BR-A4QL-01A
0 years, female, white, stage:Stage IIIB, dead, 491 days
8.6
TCGA-VQ-AA6D-01A
0 years, female, stage:Stage IIIA, alive, 521 days
8.5
TCGA-B7-A5TN-01A
0 years, male, white, stage:Stage IIB, alive, 287 days
8.5
TCGA-HU-A4GD-01A
0 years, male, asian, stage:Stage IIB, alive, 692 days
8.3
TCGA-BR-8291-01A
0 years, male, white, stage:Stage IIB, dead, 607 days
8.2
TCGA-D7-A74A-01A
0 years, female, white, stage:Stage IIIA, alive, 607 days
8.2
TCGA-R5-A7ZF-01A
0 years, female, black or african american, stage:Stage IV, dead, 259 days
8.1
TCGA-VQ-A8P8-01A
0 years, female, black or african american, stage:Stage IIB, alive, 942 days
8.0
TCGA-BR-8381-01A
0 years, male, white, stage:Stage IIB, alive, 224 days
7.9
TCGA-BR-8588-01A
0 years, female, white, stage:Stage IIB, alive, 389 days
7.8
TCGA-VQ-A8PD-01A
0 years, male, white, stage:Stage IIIC, dead, 496 days
7.7
TCGA-VQ-A8PC-01A
0 years, male, white, stage:Stage IIIA, dead, 1407 days
7.7
TCGA-IN-8462-01A
0 years, male, white, stage:Stage IIB, alive, 572 days
7.7
TCGA-HU-8608-01A
0 years, male, asian, stage:Stage IIIB, alive, 641 days
7.7
TCGA-CD-8527-01A
0 years, female, asian, stage:Stage II, dead, 218 days
7.5
TCGA-CD-8533-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.5
TCGA-FP-8210-01A
0 years, male, asian, stage:Stage IIIA, dead, 153 days
7.4
TCGA-BR-8686-01A
0 years, male, asian, stage:Stage IIIB, dead, 635 days
7.4
TCGA-CD-8525-01A
0 years, female, asian, stage:Stage IIIA, alive, 383 days
7.4
TCGA-D7-6822-01A
0 years, male, white, stage:Stage IB, alive, 375 days
7.4
TCGA-BR-6852-01A
0 years, female, white, stage:Stage IIA, alive, 1367 days
7.4
TCGA-HU-A4H6-01A
0 years, female, asian, stage:Stage IIIA, alive, 644 days
7.2
TCGA-BR-7901-01A
0 years, male, white, stage:Stage IIB, dead, 105 days
7.2
TCGA-VQ-A8P3-01A
0 years, male, white, stage:Stage IIIA, alive, 1132 days
7.1
TCGA-BR-6453-01A
0 years, male, white, stage:Stage IIA, alive, 485 days
7.1
TCGA-HF-A5NB-01A
0 years, female, stage:Stage IIIC, alive, 928 days
7.0
TCGA-F1-A448-01A
0 years, male, white, stage:Stage IIIB, alive, 647 days
7.0
TCGA-CG-4440-01A
0 years, female, stage:Stage IV, dead, 122 days
7.0
TCGA-CG-4436-01A
0 years, male, stage:Stage IB, alive, 243 days
7.0
TCGA-HU-A4HB-01A
0 years, male, asian, stage:Stage IIB, dead, 477 days
6.9
TCGA-BR-8373-01A
0 years, female, white, stage:Stage IIIA, alive, 450 days
6.9
TCGA-D7-6519-01A
0 years, female, white, stage:'--, alive, 625 days
6.9
TCGA-CD-8524-01A
0 years, female, asian, stage:Stage II, alive, 388 days
6.8
TCGA-BR-8682-01A
0 years, male, asian, stage:Stage IIB, alive, 991 days
6.7
TCGA-ZA-A8F6-01A
0 years, male, white, stage:Stage IB, alive, 525 days
6.7
TCGA-VQ-A8DU-01A
0 years, male, white, stage:Stage IIIA, dead, 166 days
6.7
TCGA-D7-6522-01A
0 years, male, white, stage:Stage IB, alive, 566 days
6.7
TCGA-BR-7958-01A
0 years, male, white, stage:Stage IIIB, alive, 899 days
6.6
TCGA-VQ-A8PQ-01A
0 years, female, white, stage:Stage IV, dead, 476 days
6.6
TCGA-RD-A8NB-01A
0 years, female, white, stage:Stage IIIA, dead, 513 days
6.5
TCGA-HU-A4H5-01A
0 years, male, asian, stage:Stage IB, alive, 724 days
6.4
TCGA-BR-8289-01A
0 years, male, white, stage:Stage IV, dead, 81 days
6.4
TCGA-D7-6520-01A
0 years, male, white, stage:Stage IIIA, alive, 573 days
6.3
TCGA-BR-8080-01A
0 years, female, white, stage:Stage IIIC, dead, 292 days
6.3
TCGA-VQ-A8P5-01A
0 years, male, white, stage:Stage IIA, dead, 235 days
6.2
TCGA-CD-5798-01A
0 years, male, asian, stage:Stage II, alive, 408 days
6.2
TCGA-CG-5718-01A
0 years, female, stage:Stage II, dead, 1095 days
6.0
TCGA-BR-4280-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.0
TCGA-BR-4257-01A
0 years, female, white, stage:'--, dead, 294 days
5.9
TCGA-BR-8384-01A
0 years, male, white, stage:Stage IIIC, alive, 113 days
5.9
TCGA-VQ-A8PB-01A
0 years, female, white, stage:Stage II, dead, 1043 days
5.8
TCGA-BR-7723-01A
0 years, male, white, stage:Stage IIIB, dead, 874 days
5.7
TCGA-BR-8059-01A
0 years, male, white, stage:Stage III, dead, 439 days
5.7
TCGA-D7-A6EX-01A
0 years, female, white, stage:Stage IIIA, alive, 344 days
5.6
TCGA-VQ-A91E-01A
0 years, female, white, stage:Stage IIIB, alive, 664 days
5.6
TCGA-VQ-A91Q-01A
0 years, male, stage:Stage IV, dead, 633 days
5.5
TCGA-CG-5732-01A
0 years, male, stage:Stage IV, dead, 2100 days
5.4
TCGA-FP-7916-01A
0 years, male, asian, stage:Stage IIIC, dead, 428 days
5.4
TCGA-BR-8060-01A
0 years, female, white, stage:Stage IIB, dead, 348 days
5.4
TCGA-VQ-A927-01A
0 years, male, white, stage:Stage IIIB, dead, 200 days
5.2
TCGA-VQ-A8PJ-01A
0 years, male, stage:Stage IV, dead, 82 days
5.1
TCGA-BR-8687-01A
0 years, female, white, stage:Stage IIIC, dead, 250 days
5.1
TCGA-D7-A6EZ-01A
0 years, male, white, stage:Stage IIIA, dead, 618 days
5.1
TCGA-F1-6875-01A
0 years, male, black or african american, stage:Stage IA, dead, 2197 days
5.0
TCGA-BR-8591-01A
0 years, male, white, stage:Stage IIIC, alive, 856 days
4.9
TCGA-BR-A4J4-01A
0 years, male, asian, stage:Stage IIIB, alive, 16 days
4.9
TCGA-BR-8297-01A
0 years, male, white, stage:Stage IIIC, alive, 225 days
4.9
TCGA-BR-8077-01A
0 years, female, white, stage:Stage IIIB, alive, 21 days
4.8
TCGA-VQ-AA6G-01A
0 years, male, white, stage:Stage IIA, dead, 792 days
4.8
TCGA-CD-5813-01A
0 years, male, asian, stage:Stage II, dead, 377 days
4.8
TCGA-D7-6521-01A
0 years, male, white, stage:'--, alive, 564 days
4.8
TCGA-BR-7704-01A
0 years, female, white, stage:Stage II, alive, 1072 days
4.8
TCGA-BR-6566-01A
0 years, female, white, stage:Stage IIA, alive, 997 days
4.7
TCGA-RD-A7BS-01A
0 years, male, white, stage:Stage IIIA, dead, 336 days
4.6
TCGA-BR-8058-01A
0 years, female, white, stage:Stage IIIB, alive, 1133 days
4.6
TCGA-BR-A4J5-01A
0 years, male, asian, stage:Stage IIIA, alive, 862 days
4.6
TCGA-CG-4306-01A
0 years, male, stage:Stage IV, dead, 1 days
4.6
TCGA-VQ-A8E2-01A
0 years, male, asian, stage:Stage IIIB, alive, 1319 days
4.5
TCGA-D7-6525-01A
0 years, male, white, stage:Stage IIIA, dead, 406 days
4.5
TCGA-HU-8244-01A
0 years, female, asian, stage:Stage IA, alive, 742 days
4.4
TCGA-BR-8483-01A
0 years, male, white, stage:Stage IIIA, alive, 164 days
4.3
TCGA-HU-8610-01A
0 years, male, asian, stage:Stage IA, alive, 23 days
4.3
TCGA-BR-A44U-01A
0 years, male, white, stage:Stage IIIB, dead, 422 days
4.3
TCGA-MX-A5UG-01A
0 years, male, asian, stage:Stage IIIA, dead, 113 days
4.2
TCGA-IN-A7NR-01A
0 years, female, white, stage:Stage IV, alive, 198 days
4.2
TCGA-CG-4477-01A
0 years, female, stage:Stage IB, alive, 942 days
4.2
TCGA-IN-A7NU-01A
0 years, male, white, stage:Stage IIIB, alive, 356 days
4.2
TCGA-VQ-AA6K-01A
0 years, male, white, stage:Stage IIIC, dead, 378 days
4.0
TCGA-BR-6801-01A
0 years, male, white, stage:Stage IIA, alive, 1223 days
4.0
TCGA-CD-8535-01A
0 years, male, asian, stage:Stage IIIA, alive, 390 days
4.0
TCGA-BR-6803-01A
0 years, female, white, stage:Stage IIA, alive, 949 days
3.9
TCGA-HU-A4GT-01A
0 years, female, asian, stage:Stage IIA, alive, 198 days
3.9
TCGA-HU-8249-01A
0 years, male, asian, stage:Stage IIIA, alive, 881 days
3.8
TCGA-IN-7808-01A
0 years, male, white, stage:'--, dead, 105 days
3.8
TCGA-CD-8534-01A
0 years, male, asian, stage:Stage II, alive, 367 days
3.8
TCGA-CD-A4MH-01A
0 years, female, asian, stage:Stage IIA, alive, 371 days
3.8
TCGA-VQ-AA69-01A
0 years, male, white, stage:Stage IIIA, alive, 864 days
3.7
TCGA-BR-7715-01A
0 years, male, white, stage:Stage IIA, alive, 1023 days
3.7
TCGA-VQ-A8PM-01A
0 years, male, white, stage:Stage IV, dead, 57 days
3.6
TCGA-CG-5717-01A
0 years, male, stage:Stage II, dead, 212 days
3.6
TCGA-BR-8364-01A
0 years, female, white, stage:Stage IIIC, alive, 675 days
3.6
TCGA-RD-A8N0-01A
0 years, female, white, stage:Stage IIIB, alive, 1236 days
3.6
TCGA-VQ-A928-01A
0 years, male, white, stage:Stage IV, dead, 174 days
3.5
TCGA-D7-A6F2-01A
0 years, male, white, stage:Stage IB, alive, 476 days
3.5
TCGA-CG-4465-01A
0 years, female, stage:Stage IV, dead, 274 days
3.5
TCGA-BR-8371-01A
0 years, male, white, stage:Stage IIIB, dead, 359 days
3.5
TCGA-R5-A7ZI-01A
0 years, female, white, stage:Stage IV, alive, 2267 days
3.4
TCGA-HU-A4GJ-01A
0 years, female, asian, stage:Stage IIIC, alive, 650 days
3.4
TCGA-CD-A486-01A
0 years, male, asian, stage:Stage IIA, dead, 192 days
3.4
TCGA-BR-8296-01A
0 years, female, white, stage:Stage IIIC, dead, 474 days
3.2
TCGA-HF-7132-01A
male, stage:Stage II, alive, 2351 days
3.2
TCGA-VQ-A91Y-01A
0 years, male, white, stage:Stage IIIC, dead, 296 days
3.1
TCGA-RD-A8N9-01A
0 years, female, asian, stage:Stage II, alive, 1083 days
3.1
TCGA-CG-5722-01A
0 years, female, stage:Stage IV, alive, 30 days
3.0
TCGA-BR-7957-01A
0 years, female, white, stage:Stage IV, dead, 276 days
3.0
TCGA-CG-5734-01A
0 years, male, stage:Stage IIIA, dead, 243 days
2.8
TCGA-BR-A44T-01A
0 years, female, white, stage:Stage IIA, alive, 1038 days
2.7
TCGA-VQ-A8E0-01A
0 years, male, black or african american, stage:Stage IIIA, dead, 562 days
2.7
TCGA-FP-7735-01A
0 years, male, black or african american, stage:Stage IB, dead, 106 days
2.6
TCGA-D7-A748-01A
0 years, female, white, stage:Stage IV, dead, 132 days
2.5
TCGA-RD-A8N5-01A
0 years, male, white, stage:Stage IIIA, dead, 1747 days
2.5
TCGA-CG-4460-01A
0 years, female, stage:Stage IV, dead, 669 days
2.5
TCGA-B7-5818-01A
0 years, male, white, stage:Stage IB, alive, 356 days
2.5
TCGA-D7-8578-01A
0 years, male, white, stage:Stage IB, alive, 643 days
2.3
TCGA-BR-A4CS-01A
0 years, male, white, stage:Stage IIIC, dead, 45 days
2.3
TCGA-VQ-A8PK-01A
0 years, male, white, stage:Stage IIIB, dead, 543 days
2.3
TCGA-BR-A4J6-01A
0 years, female, white, stage:Stage IIA, alive, 20 days
2.3
TCGA-IN-8663-01A
0 years, male, white, stage:Stage IIB, dead, 103 days
2.2
TCGA-HU-A4GY-01A
0 years, female, asian, stage:Stage IIIA, alive, 8 days
2.2
TCGA-BR-A4J7-01A
0 years, male, asian, stage:Stage IIB, alive, 989 days
2.2
TCGA-IN-AB1X-01A
0 years, female, white, stage:Stage IIA, alive, 411 days
2.0
TCGA-R5-A805-01A
0 years, male, white, stage:Stage IIIB, dead, 281 days
2.0
TCGA-CG-4305-01A
0 years, male, stage:Stage II, alive, 485 days
2.0
TCGA-HU-A4G8-01A
0 years, female, asian, stage:Stage IIB, alive, 690 days
2.0
TCGA-BR-6710-01A
0 years, male, white, stage:Stage IB, alive, 273 days
2.0
TCGA-BR-8365-01A
0 years, female, white, stage:Stage IIA, dead, 533 days
1.9
TCGA-D7-A747-01A
0 years, male, white, stage:Stage IIB, dead, 255 days
1.9
TCGA-BR-7707-01A
0 years, female, white, stage:Stage IB, alive, 1090 days
1.8
TCGA-BR-4187-01A
0 years, male, white, stage:'--, dead, 141 days
1.8
TCGA-HU-A4GH-01A
0 years, male, asian, stage:Stage IA, alive, 358 days
1.8
TCGA-BR-6563-01A
0 years, male, white, stage:Stage IIB, alive, 1190 days
1.8
TCGA-IN-A6RN-01A
0 years, female, white, stage:Stage IIA, alive, 594 days
1.8
TCGA-D7-6818-01A
0 years, male, white, stage:Stage IIIA, dead, 376 days
1.7
TCGA-VQ-A94T-01A
0 years, male, stage:Stage IIIB, dead, 342 days
1.7
TCGA-IN-AB1V-01A
0 years, male, white, stage:Stage IA, alive, 479 days
1.6
TCGA-KB-A93G-01A
0 years, male, white, stage:Stage IB, alive, 613 days
1.6
TCGA-BR-8487-01A
0 years, female, white, stage:Stage IIA, alive, 34 days
1.6
TCGA-BR-8366-01A
0 years, female, white, stage:Stage IIA, alive, 29 days
1.6
TCGA-BR-8678-01A
0 years, male, white, stage:Stage IB, alive, 754 days
1.6
TCGA-IN-A6RJ-01A
0 years, male, white, stage:Stage IA, alive, 379 days
1.5
TCGA-BR-8592-01A
0 years, female, white, stage:Stage IIIB, dead, 191 days
1.5
TCGA-D7-A4Z0-01A
0 years, female, white, stage:Stage IIB, alive, 449 days
1.4
TCGA-VQ-A8DV-01A
0 years, male, white, stage:Stage IB, dead, 403 days
1.4
TCGA-BR-6564-01A
0 years, female, white, stage:Stage IIIA, dead, 794 days
1.4
TCGA-B7-A5TK-01A
0 years, male, white, stage:Stage IIIA, alive, 288 days
1.3
TCGA-CG-5723-01A
0 years, male, stage:Stage II, alive, 2496 days
1.3
TCGA-CG-4475-01A
0 years, male, stage:Stage IIB, alive, 699 days
1.3
TCGA-CD-A489-01A
0 years, male, asian, stage:Stage IIA, dead, 344 days
1.3
TCGA-FP-8209-01A
0 years, male, white, stage:Stage IB, dead, 1811 days
1.2
TCGA-BR-4279-01A
0 years, male, white, stage:Stage II, dead, 291 days
1.1
TCGA-RD-A8MW-01A
0 years, male, white, stage:Stage IIIB, dead, 1153 days
1.1
TCGA-BR-A4IV-01A
0 years, male, asian, stage:Stage IIIB, dead, 869 days
1.0
TCGA-D7-8574-01A
0 years, male, white, stage:Stage IIIA, alive, 523 days
1.0
TCGA-RD-A7BW-01A
0 years, female, white, stage:Stage IB, dead, 156 days
0.9
TCGA-VQ-A94P-01A
0 years, male, white, stage:'--, dead, 81 days
0.9
TCGA-BR-A4J9-01A
0 years, male, white, stage:Stage IIA, alive, 14 days
0.9
TCGA-BR-4201-01A
0 years, female, white, stage:'--, dead, 940 days
0.9
TCGA-CD-8531-01A
0 years, female, asian, stage:Stage IIIA, alive, 383 days
0.8
TCGA-BR-6709-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
0.8
TCGA-RD-A8N2-01A
0 years, female, white, stage:Stage IB, alive, 3540 days
0.6
TCGA-BR-8372-01A
0 years, male, white, stage:Stage IIIC, alive, 951 days
0.6
TCGA-CG-4443-01A
0 years, male, stage:Stage IA, alive, 912 days
0.5
TCGA-IN-A7NT-01A
0 years, female, white, stage:Stage IIB, alive, 323 days
0.5
TCGA-VQ-A94O-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 640 days
0.5
TCGA-CG-4301-01A
0 years, female, stage:Stage IV, alive, 92 days
0.4
TCGA-CG-5725-01A
0 years, male, stage:Stage IB, dead, 457 days
0.4
TCGA-CG-5721-01A
0 years, male, stage:Stage IV, alive, 183 days
0.4
TCGA-VQ-A8PP-01A
0 years, male, stage:Stage IV, dead, 712 days
0.3
TCGA-BR-7851-01A
0 years, male, white, stage:Stage IIB, dead, 574 days
0.3
TCGA-BR-4256-01A
0 years, male, white, stage:'--, dead, 284 days
0.2
TCGA-BR-8081-01A
0 years, female, white, stage:Stage IIB, alive, 981 days
0.2
TCGA-HU-A4HD-01A
0 years, male, asian, stage:Stage IIIA, alive, 1016 days
0.2
TCGA-RD-A8N4-01A
0 years, female, white, stage:Stage IIIA, alive, 2171 days
0.1
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
The Human Protein Atlas project is funded
