HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:3.3 nTPM
HPA Brain:61.6 nTPM
GTEx:3.3 nTPM
FANTOM5:57.3 Scaled Tags Per Million
Pig:71.9 nTPM
Mouse:80.5 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039600
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 61.6
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
1898 Male, age 80, left hemisphere 58.4
2621 Female, age 67, right hemisphere 48.0
2148 Female, age 91, left hemisphere 47.1
1911 Female, age 85, right hemisphere 41.3
1855 Male, age 76, left hemisphere 37.8
2529 Female, age 94, left hemisphere 19.7
Dentate gyrus
nTPM: 48.9
1927 Female, age 91, both hemispheres 84.2
2531 Female, age 67, both hemispheres 58.0
2246 Female, age 85, both hemispheres 43.3
2010 Male, age 76, both hemispheres 39.6
2528 Male, age 74, both hemispheres 35.2
2530 Female, age 94, left hemisphere 33.3
Entorhinal gyrus
nTPM: 39.8
2613 Female, age 94, left hemisphere 53.1
1938 Female, age 85, left hemisphere 49.0
1787 Male, age 76, left hemisphere 44.4
2764 Male, age 80, right hemisphere 40.2
2686 Male, age 75, right hemisphere 32.5
2117 Female, age 91, right hemisphere 19.3
Hippocampus, CA1
nTPM: 54.2
2749 Male, age 80, left hemisphere 104.9
1873 Female, age 85, both hemispheres 55.8
2045 Male, age 76, both hemispheres 51.2
2527 Male, age 74, both hemispheres 35.9
2082 Female, age 91, right hemisphere 23.1
Hippocampus, CA2
nTPM: 42.6
1963 Male, age 80, left hemisphere 62.6
1892 Male, age 76, both hemispheres 60.4
1940 Female, age 85, left hemisphere 40.2
2437 Female, age 94, left hemisphere 35.9
2249 Male, age 74, both hemispheres 28.3
2113 Female, age 91, right hemisphere 27.9
Hippocampus, CA3
nTPM: 53.4
2137 Male, age 80, left hemisphere 87.7
2620 Female, age 94, left hemisphere 58.7
1867 Male, age 76, both hemispheres 54.2
2861 Female, age 67, both hemispheres 46.9
1891 Female, age 85, both hemispheres 38.9
2436 Male, age 74, both hemispheres 34.0
Parahippocampal cortex
nTPM: 44.9
1850 Male, age 80, both hemispheres 60.9
1990 Female, age 91, right hemisphere 56.4
2245 Female, age 91, both hemispheres 55.9
2693 Female, age 94, both hemispheres 50.7
2250 Female, age 67, right hemisphere 50.5
1933 Female, age 85, both hemispheres 46.5
2532 Female, age 72, left hemisphere 36.7
2622 Female, age 67, right hemisphere 36.0
2692 Male, age 74, both hemispheres 28.4
2018 Male, age 76, both hemispheres 27.0
Perirhinal gyrus
nTPM: 61.6
1847 Female, age 91, left hemisphere 79.8
2521 Female, age 94, right hemisphere 67.4
1794 Male, age 80, right hemisphere 61.7
1841 Female, age 85, right hemisphere 57.5
2848 Male, age 76, right hemisphere 41.8
Subiculum
nTPM: 35.7
1901 Male, age 80, both hemispheres 51.4
1977 Female, age 85, both hemispheres 39.9
2438 Female, age 94, left hemisphere 36.7
2619 Male, age 74, both hemispheres 30.1
2042 Male, age 76, both hemispheres 29.1
2729 Female, age 91, right hemisphere 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.3
Samples: 197

Max nTPM: 18.8
Min nTPM: 0.0
Std nTPM: 3.2
Median nTPM: 2.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 18.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 15.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 14.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 13.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 12.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 11.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 11.0
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 11.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 10.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 9.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 57.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.3
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 36.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 71.9
Pig sample Sample description nTPM
Subiculum
nTPM: 48.7
Samples: 4

Max nTPM: 68.6
Min nTPM: 40.0
Sample A Female 68.6
Sample B Female 42.9
Sample C Male 40.0
Sample D Male 43.3
Dorsal hippocampus
nTPM: 58.0
Samples: 4

Max nTPM: 63.7
Min nTPM: 49.6
Sample A Female 63.7
Sample B Female 58.1
Sample C Male 60.7
Sample D Male 49.6
Entorhinal cortex
nTPM: 71.9
Samples: 4

Max nTPM: 76.1
Min nTPM: 67.8
Sample A Female 72.7
Sample B Female 67.8
Sample C Male 76.1
Sample D Male 70.8
Ventral hippocampus
nTPM: 39.1
Samples: 4

Max nTPM: 66.8
Min nTPM: 29.6
Sample A Female 29.6
Sample B Female 30.0
Sample C Male 30.0
Sample D Male 66.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 80.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.5
Samples: 4

Max nTPM: 76.8
Min nTPM: 70.2
Sample A Male 76.2
Sample B Male 74.8
Sample C Female 70.2
Sample D Female 76.8
Hippocampal formation
nTPM: 80.5
Samples: 4

Max nTPM: 92.8
Min nTPM: 67.6
Sample A Male 70.2
Sample B Male 92.8
Sample C Female 91.4
Sample D Female 67.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
70238621 Antisense, RP_050526_03_E09, Mouse strain C57BL/6J (56 days, male) 10.1
73931629 Antisense, RP_051214_04_A09, Mouse strain C57BL/6J (56 days, male) 2.0

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