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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
455.2
nTPM
GTEx:
455.2
nTPM
FANTOM5:
391.5
Scaled Tags Per Million
Pig:
1.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
455.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 455.2
Samples: 105
Max nTPM: 646.5
Min nTPM: 171.1
Std nTPM: 94.5
Median nTPM:
246_1
77 years, male
646.5
229_1
69 years, female
642.2
384_1
83 years, male
641.1
355_1
70 years, female
631.1
237_1
82 years, male
627.6
389_1
86 years, female
620.0
452_1
88 years, female
615.0
321_1
62 years, female
612.6
396_1
62 years, male
592.3
379_1
60 years, male
583.5
347_1
72 years, male
574.2
35_1
74 years, female
572.9
17_1
71 years, male
569.1
153_1
70 years, female
562.3
377_1
82 years, female
555.0
348_1
84 years, male
544.1
526_1
61 years, male
544.0
375_1
74 years, female
541.7
386_1
76 years, male
535.2
2_1
77 years, female
531.4
353_1
82 years, female
529.4
322_1
76 years, male
528.0
447_1
81 years, male
527.5
217_1
76 years, male
525.9
320_1
89 years, female
522.3
376_1
75 years, female
513.4
99_1
64 years, male
509.6
81_1
67 years, male
506.3
126_1
63 years, male
505.0
4_1
88 years, female
503.1
352_1
62 years, male
495.3
6_1
73 years, female
490.4
307_1
66 years, female
487.6
109_1
81 years, female
487.0
162_1
79 years, female
486.1
394_1
75 years, female
483.6
317_1
60 years, male
482.0
354_1
81 years, female
482.0
218_1
71 years, female
481.4
405_1
91 years, male
480.0
120_1
70 years, female
479.3
350_1
84 years, female
478.5
351_1
91 years, male
477.6
18_1
88 years, male
476.8
319_1
81 years, male
473.6
172_1
72 years, female
469.9
315_1
62 years, female
468.0
265_1
87 years, male
467.7
404_1
82 years, female
467.2
173_1
67 years, male
457.6
137_1
83 years, male
457.2
316_1
62 years, male
455.3
177_1
74 years, male
455.0
499_1
55 years, female
454.8
356_1
87 years, female
453.5
311_1
78 years, male
449.7
41_1
94 years, female
444.9
517_1
88 years, male
444.8
119_1
70 years, female
443.9
503_1
68 years, male
442.6
318_1
68 years, male
441.2
468_1
89 years, male
433.7
314_1
67 years, male
433.4
251_1
78 years, male
431.5
189_1
76 years, male
431.2
291_1
76 years, male
430.2
139_1
64 years, female
430.1
163_1
78 years, male
430.0
145_1
84 years, male
426.2
89_1
63 years, male
424.2
293_1
68 years, female
423.3
264_1
73 years, female
418.7
42_1
85 years, male
417.8
292_1
71 years, male
415.9
266_1
85 years, male
415.8
115_1
83 years, male
415.3
518_1
75 years, female
411.2
335_1
73 years, female
410.9
324_1
76 years, male
410.8
295_1
61 years, female
406.7
406_1
79 years, male
405.5
495_1
57 years, female
401.1
254_1
77 years, female
400.5
243_1
75 years, male
399.0
425_1
59 years, female
396.2
117_1
61 years, male
395.6
286_1
68 years, female
391.3
349_1
83 years, male
387.2
32_1
67 years, male
386.0
480_1
63 years, male
384.4
308_1
70 years, female
381.1
142_1
61 years, female
367.0
506_1
65 years, male
352.8
9_1
66 years, female
329.8
501_1
88 years, male
328.7
288_1
66 years, female
323.9
43_1
64 years, female
320.8
466_1
57 years, female
314.6
149_1
88 years, male
291.6
415_1
77 years, female
290.2
414_1
84 years, female
281.8
313_1
79 years, female
278.9
413_1
59 years, female
199.6
491_1
89 years, female
176.2
490_1
67 years, female
171.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.