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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1237.0
nTPM
HPA Brain:
314.5
nTPM
GTEx:
1237.0
nTPM
FANTOM5:
463.0
Scaled Tags Per Million
Pig:
0.4
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
314.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 282.1
2666
Male, age 74, left hemisphere
310.0
1833
Male, age 53, unknown
300.2
1870
Female, age 42, unknown
299.9
2828
Female, age 72, unknown
296.4
2411
Female, age 72, unknown
294.7
1827
Male, age 72, unknown
286.2
2586
Male, age 75, left hemisphere
284.5
1830
Male, age 51, unknown
273.4
2019
Male, age 18, unknown
265.1
2219
Male, age 76, both hemispheres
210.2
Dorsal raphe nucleus nTPM: 258.2
2298
Female, age 72, unknown
286.5
2750
Male, age 76, both hemispheres
281.9
2016
Female, age 72, unknown
274.4
1828
Male, age 53, unknown
245.5
2047
Male, age 72, unknown
202.8
Inferior colliculus nTPM: 273.8
2849
Male, age 72, unknown
300.5
1890
Male, age 53, unknown
277.5
2097
Female, age 72, unknown
272.4
1848
Female, age 42, unknown
244.9
Median raphe nucleus nTPM: 249.5
2220
Male, age 76, midline
249.5
Periaquaductal grey, anterior nTPM: 284.9
2502
Female, age 75, unknown
318.7
1947
Male, age 18, unknown
271.3
1795
Male, age 51, unknown
264.7
Periaquaductal grey, dorsal nTPM: 267.2
1831
Male, age 72, unknown
292.3
1840
Male, age 53, unknown
285.9
2850
Male, age 76, both hemispheres
250.5
2464
Female, age 72, unknown
239.9
Periaquaductal grey, lateral nTPM: 258.4
2053
Male, age 18, unknown
286.8
2140
Male, age 76, both hemispheres
278.5
2272
Male, age 74, both hemispheres
210.0
Pretectal area nTPM: 258.1
2316
Male, age 76, right hemisphere
308.9
2825
Male, age 18, unknown
285.6
1815
Male, age 53, unknown
279.8
1817
Female, age 42, unknown
268.6
2007
Male, age 72, unknown
267.7
1816
Male, age 51, unknown
254.0
1944
Female, age 72, unknown
243.3
2224
Female, age 72, unknown
240.4
2407
Male, age 75, both hemispheres
239.7
2273
Male, age 74, both hemispheres
226.9
2667
Female, age 75, unknown
224.3
Red nucleus nTPM: 314.5
2503
Female, age 72, unknown
378.0
1821
Female, age 72, unknown
351.8
2584
Male, age 75, left hemisphere
334.9
2725
Female, age 75, unknown
330.3
1904
Male, age 53, unknown
326.2
2588
Male, age 74, left hemisphere
325.7
1865
Male, age 51, unknown
325.2
2227
Male, age 72, unknown
312.2
2769
Male, age 72, unknown
296.3
1954
Female, age 42, unknown
273.0
2823
Male, age 76, right hemisphere
269.0
2785
Male, age 18, unknown
251.6
Substantia nigra nTPM: 310.5
2699
Male, age 18, unknown
370.8
1851
Male, age 51, unknown
369.2
2665
Male, age 74, both hemispheres
342.3
1916
Female, age 42, unknown
330.4
2409
Female, age 72, unknown
316.6
2590
Female, age 75, unknown
312.0
1889
Female, age 72, unknown
291.2
1941
Male, age 53, unknown
260.0
2583
Male, age 75, right hemisphere
257.6
2241
Male, age 72, unknown
254.3
Superior colliculus nTPM: 298.2
2587
Male, age 74, left hemisphere
396.4
1995
Male, age 72, unknown
369.5
1913
Female, age 42, unknown
354.2
1839
Male, age 51, unknown
289.3
2668
Female, age 75, unknown
279.7
1796
Male, age 53, unknown
277.2
2261
Male, age 18, unknown
269.4
1895
Male, age 76, right hemisphere
260.9
2087
Female, age 72, unknown
245.9
2664
Male, age 75, both hemispheres
239.1
Ventral tegmental area nTPM: 299.1
1915
Female, age 42, unknown
345.5
2223
Female, age 72, unknown
312.1
2410
Female, age 72, unknown
307.0
2021
Male, age 53, unknown
293.8
1942
Male, age 51, unknown
269.7
2218
Male, age 76, both hemispheres
266.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1237.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 1237.0
Samples: 139
Max nTPM: 2863.3
Min nTPM: 473.1
Std nTPM: 446.7
Median nTPM: 1166.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
2863.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
2795.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
2758.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
2537.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
2238.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
2160.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
2122.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1977.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1969.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1926.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1872.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1853.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1851.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1831.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1811.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1751.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1748.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1732.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1725.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1674.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1666.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1618.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1617.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1599.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
1597.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
1586.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
1562.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1558.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
1536.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
1496.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1487.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1473.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1460.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1459.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1428.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1426.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1412.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1386.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1385.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1380.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
1374.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1371.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
1360.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1358.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1353.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1350.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
1326.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
1316.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
1311.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
1310.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1296.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1295.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1286.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1281.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1281.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
1280.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1278.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1272.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
1270.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
1266.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
1254.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
1253.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1231.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
1219.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1214.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1210.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
1209.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1207.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1200.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
1166.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1155.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1144.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
1130.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1128.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1113.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
1111.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1108.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
1096.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
1095.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
1083.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
1081.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
1075.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
1072.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1066.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
1065.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
1061.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1032.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
1029.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
1027.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
1019.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
1002.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
1000.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
997.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
990.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
989.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
984.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
983.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
981.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
977.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
943.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
939.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
937.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
927.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
918.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
913.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
912.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
903.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
900.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
893.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
870.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
867.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
864.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
863.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
861.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
856.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
855.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
842.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
832.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
819.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
817.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
806.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
798.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
793.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
769.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
767.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
767.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
767.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
730.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
727.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
702.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
694.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
688.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
649.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
631.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
631.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
587.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
537.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
517.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
473.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.