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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1159.4
nTPM
HPA Brain:
322.1
nTPM
GTEx:
1159.4
nTPM
FANTOM5:
324.8
Scaled Tags Per Million
Pig:
0.4
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
322.1
Sample id
Sample description
nTPM
Amygdala nTPM: 322.1
2695
Female, age 67, right hemisphere
453.6
2514
Male, age 75, right hemisphere
304.1
2814
Male, age 76, right hemisphere
292.7
2517
Female, age 94, left hemisphere
291.6
1987
Female, age 91, left hemisphere
268.7
Basal amygdala nTPM: 270.0
2827
Female, age 67, right hemisphere
376.2
2609
Male, age 75, right hemisphere
315.0
2685
Female, age 94, left hemisphere
261.4
2110
Male, age 80, left hemisphere
253.5
2243
Female, age 91, right hemisphere
212.3
1955
Male, age 76, both hemispheres
201.4
Central amygdala nTPM: 296.7
2826
Female, age 94, left hemisphere
500.4
2515
Male, age 75, right hemisphere
302.3
1905
Male, age 76, both hemispheres
262.0
2239
Male, age 80, left hemisphere
214.2
2701
Female, age 91, right hemisphere
204.9
Corticomedial amygdala nTPM: 231.8
2428
Male, age 75, right hemisphere
279.0
2829
Male, age 80, left hemisphere
254.6
2535
Female, age 67, right hemisphere
239.4
2240
Male, age 76, both hemispheres
218.5
2429
Female, age 94, left hemisphere
205.9
2242
Female, age 91, right hemisphere
193.2
Lateral amygdala nTPM: 320.2
2830
Female, age 67, right hemisphere
497.3
2516
Male, age 75, right hemisphere
388.9
2534
Female, age 94, left hemisphere
332.4
2256
Male, age 80, left hemisphere
255.0
1883
Male, age 76, both hemispheres
239.0
2255
Female, age 91, right hemisphere
208.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1159.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1159.4
Samples: 152
Max nTPM: 3505.1
Min nTPM: 379.0
Std nTPM: 504.5
Median nTPM: 1061.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
3505.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
3262.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
2895.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
2720.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
2534.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
2360.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
2339.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
2258.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2047.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
1966.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
1950.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1838.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
1828.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1771.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1769.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
1657.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
1651.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1645.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1635.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
1601.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1567.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1564.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1560.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
1543.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
1487.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1478.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
1461.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
1446.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1420.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
1419.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
1412.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1409.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1404.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1398.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1395.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
1393.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
1392.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1376.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1362.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1340.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
1312.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1310.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1303.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1302.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1293.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1274.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1270.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1262.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
1251.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1212.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1188.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1188.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1187.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
1173.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
1161.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1159.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
1151.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1150.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1149.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1147.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
1138.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1134.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1132.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
1121.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1120.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1112.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1111.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1095.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1092.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1091.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
1091.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1090.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
1075.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
1074.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1066.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
1062.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
1059.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1056.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
1054.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1042.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1038.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1038.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1035.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1009.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
1002.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
1002.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
1000.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1000.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
997.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
995.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
979.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
967.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
966.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
950.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
944.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
939.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
925.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
923.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
900.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
899.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
896.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
893.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
886.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
884.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
883.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
878.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
869.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
867.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
862.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
852.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
849.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
832.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
832.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
820.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
808.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
799.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
798.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
790.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
780.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
778.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
773.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
772.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
770.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
768.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
767.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
759.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
756.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
746.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
727.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
715.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
705.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
695.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
695.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
688.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
679.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
676.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
668.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
667.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
664.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
660.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
657.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
644.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
640.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
625.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
615.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
614.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
603.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
601.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
588.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
586.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
579.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
379.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.