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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
42.0
nTPM
HPA Brain:
138.0
nTPM
GTEx:
42.0
nTPM
FANTOM5:
106.9
Scaled Tags Per Million
Pig:
37.8
nTPM
Mouse:
69.6
nTPM
Allen mouse:
11.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
138.0
Sample id
Sample description
nTPM
Amygdala nTPM: 87.4
2814
Male, age 76, right hemisphere
117.5
2517
Female, age 94, left hemisphere
94.6
2695
Female, age 67, right hemisphere
76.9
1987
Female, age 91, left hemisphere
75.4
2514
Male, age 75, right hemisphere
72.3
Basal amygdala nTPM: 138.0
2827
Female, age 67, right hemisphere
182.3
2685
Female, age 94, left hemisphere
148.0
2243
Female, age 91, right hemisphere
139.9
2110
Male, age 80, left hemisphere
136.0
2609
Male, age 75, right hemisphere
111.9
1955
Male, age 76, both hemispheres
110.2
Central amygdala nTPM: 106.1
2826
Female, age 94, left hemisphere
144.9
2239
Male, age 80, left hemisphere
121.5
1905
Male, age 76, both hemispheres
117.7
2515
Male, age 75, right hemisphere
74.7
2701
Female, age 91, right hemisphere
71.8
Corticomedial amygdala nTPM: 121.1
2535
Female, age 67, right hemisphere
180.7
2829
Male, age 80, left hemisphere
130.0
2242
Female, age 91, right hemisphere
124.7
2429
Female, age 94, left hemisphere
110.6
2240
Male, age 76, both hemispheres
93.9
2428
Male, age 75, right hemisphere
86.6
Lateral amygdala nTPM: 116.3
2534
Female, age 94, left hemisphere
146.8
2256
Male, age 80, left hemisphere
128.2
2830
Female, age 67, right hemisphere
126.3
1883
Male, age 76, both hemispheres
123.5
2255
Female, age 91, right hemisphere
98.5
2516
Male, age 75, right hemisphere
74.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 42.0
Samples: 152
Max nTPM: 92.0
Min nTPM: 12.7
Std nTPM: 16.7
Median nTPM: 41.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
92.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
89.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
80.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
78.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
74.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
72.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
72.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
72.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
70.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
70.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
69.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
69.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
66.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
66.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
66.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
64.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
64.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
63.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
63.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
62.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
61.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
61.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
61.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
60.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
60.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
60.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
59.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
59.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
57.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
57.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
56.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
55.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
55.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
55.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
55.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
54.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
53.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
53.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
52.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
52.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
51.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
51.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
50.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
50.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
50.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
49.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
49.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
48.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
48.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
47.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
47.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
46.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
46.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
46.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
45.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
45.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
44.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
44.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
44.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
43.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
43.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
43.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
43.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
42.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
42.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
42.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
42.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
42.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
42.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
42.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
42.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
41.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
41.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
40.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
40.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
40.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
39.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
39.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
39.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
38.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
38.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
38.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
38.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
38.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
37.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
36.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
35.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
35.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
35.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
34.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
33.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
33.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
33.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
32.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
32.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
32.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
32.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
32.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
32.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
31.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
31.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
31.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
31.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
31.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
30.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
29.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
29.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
28.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
28.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
28.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
28.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
28.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
27.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
27.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
27.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
27.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
25.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
25.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
25.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
24.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
24.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
24.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
24.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
24.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
24.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
24.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
23.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
22.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
22.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
22.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
21.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
20.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
20.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
20.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
18.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
17.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
17.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
16.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
16.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
15.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
14.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
14.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
13.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
12.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
69.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 69.6
Samples: 4
Max nTPM: 87.1
Min nTPM: 58.1
Sample A
Male
62.1
Sample B
Male
70.9
Sample C
Female
87.1
Sample D
Female
58.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.