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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
18.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
3.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
105.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
97.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
91.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
86.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
85.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
82.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
73.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
70.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
68.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
67.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
67.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
65.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
65.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
63.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
62.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
62.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
61.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
60.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
60.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
59.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
57.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
57.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
56.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
56.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
56.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
55.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
53.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
53.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
53.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
53.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
53.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
53.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
52.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
51.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
51.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
51.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
50.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
49.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
49.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
49.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
47.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
46.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
46.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
46.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
46.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
45.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
45.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
45.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
45.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
45.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
44.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
44.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
44.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
43.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
43.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
43.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
42.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
42.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
42.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
42.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
41.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
41.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
40.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
40.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
40.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
40.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
39.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
39.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
39.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
39.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
39.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
39.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
38.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
38.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
38.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
38.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
38.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
38.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
37.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
37.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
37.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
37.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
37.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
36.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
36.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
36.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
35.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
35.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
34.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
34.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
33.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
33.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
33.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
32.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
32.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
31.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
31.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
31.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
30.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
30.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
30.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
29.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
29.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
29.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
27.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
27.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
27.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
25.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
25.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
25.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
24.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
24.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
24.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
23.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
22.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
21.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
20.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
19.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
18.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
17.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
16.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
15.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
14.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
14.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
10.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
9.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
8.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
8.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
8.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
8.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
7.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
7.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
7.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
7.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
6.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
6.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
6.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
6.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
6.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
5.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
5.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
5.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
5.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
5.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
5.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
5.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
5.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
5.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
5.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
5.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
5.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
4.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
4.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
4.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
4.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
4.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
4.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
4.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
4.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
4.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
4.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
4.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
4.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
4.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
4.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
4.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
4.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
4.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
4.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
4.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
4.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
4.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
4.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
4.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
3.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
3.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
3.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
3.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
3.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
3.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
3.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
3.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
3.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
3.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
3.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
3.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
3.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
3.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
2.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
0.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
42.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
40.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
32.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
30.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
28.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
24.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
22.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
21.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
21.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
16.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
11.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
10.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
9.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
8.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
8.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
7.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
5.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
5.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
63.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
61.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
61.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
59.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
58.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
51.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
50.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
48.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
40.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
39.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
37.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
37.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
35.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
35.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
33.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
33.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
31.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
31.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
30.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
29.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
28.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
28.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
27.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
27.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
26.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
21.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
20.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
20.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
18.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
15.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
14.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
13.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
12.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
12.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
10.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
9.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
8.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
8.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
8.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
8.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
7.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
6.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
6.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
6.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
6.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
5.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
5.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
5.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
5.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
5.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
5.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
5.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
4.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
4.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
4.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
4.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
4.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
4.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
4.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
3.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
3.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
3.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
3.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
3.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
3.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
3.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
2.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
2.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
2.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
2.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
2.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
2.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
2.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
0.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
0.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
