Expression of SLC52A2 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

SLC52A2 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 11.35

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

14.2

Number of samples

362

Samples

Sample	Description	TPM
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	112.9
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	90.2
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	77.7
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	77.5
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	77.5
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	70.5
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	64.6
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	62.5
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	60.0
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	59.7
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	55.6
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	52.5
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	50.1
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	49.8
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	47.9
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	44.9
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	44.6
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	44.6
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	42.8
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	40.0
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	37.9
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	36.4
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	36.1
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	36.1
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	36.0
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	34.2
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	33.0
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	32.7
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	32.5
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	32.2
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	32.0
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	31.5
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	31.5
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	30.6
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	30.3
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	29.4
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	29.3
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	29.0
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	29.0
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	28.0
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	27.1
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	26.7
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	26.2
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	25.6
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	25.6
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	25.4
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	25.0
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	25.0
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	24.6
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	24.5
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	24.4
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	24.4
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	24.3
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	23.9
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	23.8
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	23.7
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	23.6
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	23.5
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	23.0
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	22.7
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	22.6
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	22.3
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	21.9
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	21.8
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	21.7
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	21.6
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	21.5
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	21.4
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	21.2
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	21.2
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	21.0
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	21.0
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	21.0
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	20.7
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	20.7
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	20.7
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	20.5
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	20.5
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	20.2
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	20.2
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	19.3
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	19.0
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	18.6
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	18.0
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	17.8
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	17.6
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	17.3
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	17.3
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	17.2
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	16.9
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	16.8
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	16.5
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	16.3
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	16.3
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	16.2
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	16.2
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	16.1
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	16.0
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	15.9
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	15.9
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	15.8
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	15.6
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	15.6
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	15.5
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	15.4
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	15.0
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	15.0
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	14.7
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	14.6
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	14.5
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	14.4
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	14.4
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	14.2
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	14.2
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	13.9
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	13.9
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	13.7
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	13.7
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	13.6
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	13.4
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	13.3
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	13.1
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	12.9
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	12.9
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	12.8
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	12.8
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	12.8
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	12.6
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	12.5
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	12.4
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	12.3
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	12.3
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	12.2
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	12.1
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	12.0
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	11.9
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	11.9
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	11.8
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	11.7
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	11.7
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	11.6
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	11.6
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	11.6
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	11.6
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	11.5
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	11.4
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	11.4
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	11.3
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	11.2
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	11.1
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	11.0
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	11.0
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	11.0
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	10.9
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	10.9
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	10.8
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	10.8
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	10.8
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	10.7
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	10.6
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	10.6
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	10.5
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	10.5
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	10.5
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	10.3
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	10.3
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	10.2
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	10.1
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	10.1
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	10.1
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	10.0
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	9.9
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	9.9
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	9.9
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	9.9
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	9.8
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	9.7
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	9.7
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	9.6
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	9.6
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	9.5
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	9.4
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	9.3
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	9.2
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	9.2
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	9.2
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	9.1
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	9.0
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	8.9
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	8.9
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	8.8
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	8.8
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	8.8
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	8.7
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	8.7
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	8.6
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	8.6
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	8.6
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	8.5
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	8.5
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	8.5
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	8.3
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	8.2
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	8.2
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	8.2
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	8.2
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	8.1
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	8.1
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	8.1
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	8.1
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	8.1
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	8.0
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	8.0
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	8.0
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	8.0
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	7.9
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	7.9
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	7.9
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	7.8
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	7.8
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	7.7
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	7.6
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	7.5
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	7.4
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	7.3
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	7.3
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	7.3
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	7.3
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	7.2
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	7.2
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	7.1
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	7.1
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	7.1
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	7.0
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	7.0
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	6.8
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	6.8
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	6.8
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	6.8
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	6.8
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	6.6
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	6.6
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	6.6
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	6.6
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	6.5
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	6.5
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	6.5
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	6.5
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	6.5
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	6.5
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	6.4
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	6.4
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	6.3
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	6.3
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	6.3
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	6.3
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	6.2
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	6.2
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	6.1
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	6.1
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	6.1
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	6.1
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	6.1
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	6.0
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	6.0
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	6.0
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	6.0
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	6.0
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	5.9
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	5.9
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	5.9
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	5.9
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	5.8
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	5.8
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	5.8
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	5.8
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	5.7
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	5.7
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	5.7
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	5.7
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	5.7
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	5.7
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	5.7
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	5.6
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	5.6
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	5.6
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	5.5
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	5.5
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	5.4
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	5.4
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	5.4
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	5.3
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	5.2
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	5.2
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	5.2
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	5.2
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	5.1
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	5.1
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	5.1
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	5.0
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	5.0
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	4.9
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	4.9
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	4.9
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	4.9
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	4.9
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	4.9
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	4.9
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	4.8
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	4.8
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	4.8
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	4.7
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	4.7
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	4.7
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	4.6
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	4.6
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	4.6
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	4.6
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	4.6
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	4.5
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	4.5
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	4.4
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	4.4
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	4.3
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	4.2
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	4.2
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	4.1
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	4.1
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	4.1
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	4.1
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	4.1
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	4.1
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	4.0
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	4.0
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	3.9
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	3.8
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	3.7
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	3.6
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	3.6
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	3.4
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	3.4
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	3.4
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	3.3
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	3.3
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	3.3
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	3.2
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	3.2
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	3.2
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	3.2
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	3.2
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	3.0
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	3.0
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	2.9
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	2.9
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	2.9
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	2.7
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	2.6
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	2.5
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	2.4
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	2.2
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	2.0
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	2.0
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
283	Tumor	2.5
223	Tumor	1.8
573	Tumor	1.5
473	Tumor	1.3
427	Tumor	1.3
231	Tumor	1.1
395	Tumor	1.1
917	Tumor	1.1
491	Tumor	1.1
557	Tumor	1.1
743	Tumor	1.0
1041	Tumor	1.0
328	Normal	1.0
951	Tumor	0.9
187	Tumor	0.9
571	Tumor	0.9
567	Tumor	0.9
267	Tumor	0.9
285	Tumor	0.9
943	Tumor	0.8
1015	Tumor	0.7
483	Tumor	0.7
258	Normal	0.7
268	Normal	0.6
413	Tumor	0.6
813	Tumor	0.6
478	Normal	0.6
498	Normal	0.6
641	Tumor	0.6
385	Tumor	0.6
271	Tumor	0.6
224	Normal	0.5
814	Normal	0.5
724	Normal	0.5
455	Tumor	0.5
525	Tumor	0.5
467	Tumor	0.5
492	Normal	0.5
497	Tumor	0.5
1027	Tumor	0.4
257	Tumor	0.4
227	Tumor	0.4
232	Normal	0.4
262	Normal	0.4
723	Tumor	0.3
1025	Tumor	0.3
272	Normal	0.3
284	Normal	0.3
983	Tumor	0.3
228	Normal	0.3
937	Tumor	0.3
728	Normal	0.3
741	Tumor	0.3
421	Tumor	0.3
524	Normal	0.3
744	Normal	0.2
745	Tumor	0.2
463	Tumor	0.2
926	Normal	0.2
493	Tumor	0.2
953	Tumor	0.2
916	Normal	0.2
428	Normal	0.2
445	Tumor	0.2
185	Tumor	0.2
484	Normal	0.2
1013	Tumor	0.2
355	Tumor	0.2
161	Tumor	0.2
424	Normal	0.2
394	Normal	0.2
742	Normal	0.2
617	Tumor	0.2
471	Tumor	0.1
1031	Tumor	0.1
925	Tumor	0.1
1022	Normal	0.1
965	Tumor	0.1
526	Normal	0.1
386	Normal	0.1
286	Normal	0.1
984	Normal	0.1
918	Normal	0.1
1016	Normal	0.1
396	Normal	0.1
737	Tumor	0.1
415	Tumor	0.1
1028	Normal	0.1
414	Normal	0.1
922	Normal	0.1
434	Normal	0.1
1032	Normal	0.1
738	Normal	0.0
387	Tumor	0.0
426	Normal	0.0
147	Tumor	0.0
1014	Normal	0.0
433	Tumor	0.0
923	Tumor	0.0
422	Normal	0.0
635	Tumor	0.0
443	Tumor	0.0
423	Tumor	0.0
451	Tumor	0.0
188	Normal	0.0
627	Tumor	0.0
636	Normal	-0.1
924	Normal	-0.1
564	Normal	-0.1
563	Tumor	-0.1
978	Normal	-0.1
1042	Normal	-0.1
212	Normal	-0.1
616	Normal	-0.1
172	Normal	-0.1
615	Tumor	-0.1
327	Tumor	-0.1
356	Normal	-0.1
963	Tumor	-0.1
921	Tumor	-0.1
777	Tumor	-0.1
1026	Normal	-0.1
574	Normal	-0.1
391	Tumor	-0.2
388	Normal	-0.2
363	Tumor	-0.2
642	Normal	-0.2
425	Tumor	-0.2
982	Normal	-0.2
514	Normal	-0.2
261	Tumor	-0.2
755	Tumor	-0.2
572	Normal	-0.2
518	Normal	-0.2
162	Normal	-0.2
148	Normal	-0.2
981	Tumor	-0.2
558	Normal	-0.2
364	Normal	-0.2
211	Tumor	-0.2
461	Tumor	-0.2
393	Tumor	-0.2
516	Normal	-0.3
628	Normal	-0.3
392	Normal	-0.3
967	Tumor	-0.3
186	Normal	-0.3
727	Tumor	-0.3
481	Tumor	-0.3
975	Tumor	-0.3
618	Normal	-0.3
435	Tumor	-0.3
568	Normal	-0.3
957	Tumor	-0.4
976	Normal	-0.4
482	Normal	-0.4
472	Normal	-0.4
468	Normal	-0.4
416	Normal	-0.4
412	Normal	-0.4
456	Normal	-0.4
778	Normal	-0.4
952	Normal	-0.4
444	Normal	-0.4
915	Tumor	-0.5
436	Normal	-0.5
1021	Tumor	-0.5
487	Tumor	-0.5
786	Normal	-0.5
474	Normal	-0.5
477	Tumor	-0.5
515	Tumor	-0.5
465	Tumor	-0.5
513	Tumor	-0.5
488	Normal	-0.5
411	Tumor	-0.5
966	Normal	-0.5
431	Tumor	-0.6
977	Tumor	-0.6
785	Tumor	-0.6
171	Tumor	-0.6
756	Normal	-0.6
446	Normal	-0.6
432	Normal	-0.6
462	Normal	-0.6
517	Tumor	-0.6
746	Normal	-0.6
466	Normal	-0.7
464	Normal	-0.7
956	Normal	-0.7
452	Normal	-0.7
494	Normal	-0.8
955	Tumor	-0.8
968	Normal	-0.9
523	Tumor	-1.0
964	Normal	-1.0
958	Normal	-1.1
938	Normal	-2.0
944	Normal	-2.1
954	Normal	-2.7
351	Tumor	N/A
352	Normal	N/A
111	Normal	N/A
353	Tumor	N/A
112	Tumor	N/A
354	Normal	N/A
113	Tumor	N/A
114	Normal	N/A
357	Tumor	N/A
358	Normal	N/A
911	Tumor	N/A
912	Normal	N/A
913	Tumor	N/A
914	Normal	N/A
361	Tumor	N/A
362	Normal	N/A
123	Tumor	N/A
365	Tumor	N/A
124	Normal	N/A
366	Normal	N/A
125	Tumor	N/A
367	Tumor	N/A
126	Normal	N/A
368	Normal	N/A
127	Tumor	N/A
128	Normal	N/A
131	Tumor	N/A
132	Normal	N/A
375	Tumor	N/A
376	Normal	N/A
135	Tumor	N/A
136	Normal	N/A
137	Tumor	N/A
138	Normal	N/A
815	Tumor	N/A
816	Normal	N/A
817	Tumor	N/A
818	Normal	N/A
141	Tumor	N/A
383	Tumor	N/A
142	Normal	N/A
384	Normal	N/A
145	Tumor	N/A
146	Normal	N/A
823	Tumor	N/A
824	Normal	N/A
277	Tumor	N/A
278	Normal	N/A
713	Tumor	N/A
714	Normal	N/A
715	Tumor	N/A
716	Normal	N/A
721	Tumor	N/A
722	Normal	N/A
1044	Normal	N/A
1043	Tumor	N/A
297	Tumor	N/A
298	Normal	N/A
851	Tumor	N/A
852	Normal	N/A
857	Tumor	N/A
858	Normal	N/A
861	Tumor	N/A
862	Normal	N/A
863	Tumor	N/A
1046	Normal	N/A
864	Normal	N/A
1045	Tumor	N/A
865	Tumor	N/A
866	Normal	N/A
867	Tumor	N/A
868	Normal	N/A
191	Tumor	N/A
192	Normal	N/A
195	Tumor	N/A
196	Normal	N/A
873	Tumor	N/A
874	Normal	N/A
877	Tumor	N/A
878	Normal	N/A
881	Tumor	N/A
882	Normal	N/A
883	Tumor	N/A
884	Normal	N/A
647	Tumor	N/A
527	Tumor	N/A
648	Normal	N/A
528	Normal	N/A
533	Tumor	N/A
534	Normal	N/A
535	Tumor	N/A
536	Normal	N/A
537	Tumor	N/A
538	Normal	N/A
661	Tumor	N/A
662	Normal	N/A
663	Tumor	N/A
664	Normal	N/A
665	Tumor	N/A
545	Tumor	N/A
666	Normal	N/A
546	Normal	N/A
671	Tumor	N/A
672	Normal	N/A
311	Tumor	N/A
553	Tumor	N/A
312	Normal	N/A
554	Normal	N/A
313	Tumor	N/A
314	Normal	N/A
685	Tumor	N/A
686	Normal	N/A
447	Tumor	N/A
448	Normal	N/A
331	Tumor	N/A
332	Normal	N/A
695	Tumor	N/A
696	Normal	N/A
213	Tumor	N/A
697	Tumor	N/A
214	Normal	N/A
698	Normal	N/A
217	Tumor	N/A
218	Normal	N/A
341	Tumor	N/A
221	Tumor	N/A
342	Normal	N/A
222	Normal	N/A
343	Tumor	N/A
344	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA063036
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma