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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YTHDF3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
42.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
40.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
37.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
35.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
34.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
32.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
31.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
31.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
30.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
30.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
29.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
29.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
29.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
28.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
28.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
28.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
28.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
27.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
27.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
27.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
26.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
26.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
26.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
26.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
25.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
25.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
25.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
25.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
24.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
24.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
24.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
24.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
24.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
24.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
24.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
24.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
23.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
23.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
23.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
23.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
23.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
22.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
22.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
22.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
22.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
22.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
22.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
21.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
21.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
21.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
21.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
21.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
21.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
21.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
21.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
21.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
20.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
20.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
20.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
20.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
20.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
20.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
20.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
19.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
19.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
19.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
19.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
19.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
19.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
19.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
19.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
19.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
18.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
18.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
18.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
18.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
18.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
18.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
18.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
18.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
18.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
17.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
17.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
17.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
17.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
17.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
17.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
17.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
17.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
17.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
17.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
17.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
16.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
16.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
16.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
16.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
15.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
15.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
15.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
15.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
15.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
14.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
14.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
14.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
14.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
14.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
14.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
14.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
14.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
14.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
14.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
14.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
13.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
13.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
13.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
13.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
13.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
12.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
12.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
11.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
11.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
11.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
10.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
10.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
10.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
10.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
9.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
9.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
9.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
9.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
9.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
8.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
8.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
8.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
8.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
5.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YTHDF3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.7
Number of samples
231
Samples
Sample
Description
TPM
DO48672
0 years, male, NA, stage:2, alive, 450 days
56.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
56.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
53.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
48.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
46.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
44.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
44.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
42.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
42.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
42.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
40.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
39.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
37.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
34.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
34.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
33.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
33.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
31.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
31.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
31.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
31.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
30.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
30.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
30.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
29.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
29.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
29.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
28.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
28.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
28.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
28.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
28.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
28.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
27.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
27.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
27.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
27.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
27.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
27.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
26.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
26.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
26.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
26.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
25.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
25.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
25.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
25.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
24.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
24.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
24.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
24.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
24.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
24.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
24.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
23.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
23.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
23.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
23.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
23.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
23.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
22.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
22.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
22.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
22.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
22.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
22.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
22.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
22.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
22.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
22.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
22.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
22.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
22.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
21.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
21.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
21.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
21.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
21.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
21.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
20.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
20.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
20.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
20.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
20.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
19.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
19.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
19.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
19.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
19.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
19.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
19.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
19.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
19.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
18.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
18.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
18.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
18.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
18.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
18.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
18.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
18.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
18.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
18.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
18.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
18.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
18.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
18.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
17.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
17.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
17.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
17.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
17.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
17.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
17.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
16.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
16.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
16.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
15.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
15.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
15.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
15.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
15.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
15.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
14.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
14.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
14.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
14.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
14.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
14.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
14.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
14.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
14.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
14.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
13.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
13.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
13.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
12.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
12.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
12.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
12.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
12.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
12.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
12.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
11.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
11.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
11.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
11.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
11.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
10.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
10.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
9.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
9.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
5.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
1.3
965
Tumor
1.2
473
Tumor
1.1
497
Tumor
1.1
865
Tumor
1.1
537
Tumor
1.0
715
Tumor
1.0
285
Tumor
1.0
937
Tumor
0.9
231
Tumor
0.9
951
Tumor
0.9
533
Tumor
0.8
823
Tumor
0.8
1041
Tumor
0.8
567
Tumor
0.8
641
Tumor
0.8
743
Tumor
0.8
957
Tumor
0.7
1025
Tumor
0.7
877
Tumor
0.7
967
Tumor
0.7
267
Tumor
0.7
663
Tumor
0.6
427
Tumor
0.6
525
Tumor
0.6
745
Tumor
0.6
467
Tumor
0.6
283
Tumor
0.6
685
Tumor
0.6
367
Tumor
0.6
915
Tumor
0.6
471
Tumor
0.6
487
Tumor
0.5
375
Tumor
0.5
925
Tumor
0.5
851
Tumor
0.5
883
Tumor
0.5
697
Tumor
0.5
983
Tumor
0.5
443
Tumor
0.5
131
Tumor
0.5
135
Tumor
0.5
817
Tumor
0.5
523
Tumor
0.5
861
Tumor
0.5
1013
Tumor
0.5
535
Tumor
0.4
161
Tumor
0.4
881
Tumor
0.4
1021
Tumor
0.4
727
Tumor
0.4
385
Tumor
0.4
211
Tumor
0.4
493
Tumor
0.4
977
Tumor
0.4
123
Tumor
0.4
1043
Tumor
0.4
553
Tumor
0.4
975
Tumor
0.4
527
Tumor
0.4
355
Tumor
0.4
953
Tumor
0.4
517
Tumor
0.4
147
Tumor
0.3
943
Tumor
0.3
327
Tumor
0.3
671
Tumor
0.3
1027
Tumor
0.3
463
Tumor
0.3
515
Tumor
0.3
724
Normal
0.3
923
Tumor
0.3
635
Tumor
0.3
921
Tumor
0.3
477
Tumor
0.3
981
Tumor
0.3
112
Tumor
0.3
665
Tumor
0.3
721
Tumor
0.3
451
Tumor
0.3
913
Tumor
0.3
223
Tumor
0.2
191
Tumor
0.2
411
Tumor
0.2
187
Tumor
0.2
185
Tumor
0.2
737
Tumor
0.2
257
Tumor
0.2
445
Tumor
0.2
395
Tumor
0.2
113
Tumor
0.2
221
Tumor
0.2
277
Tumor
0.2
1031
Tumor
0.2
145
Tumor
0.2
363
Tumor
0.2
955
Tumor
0.2
911
Tumor
0.2
171
Tumor
0.2
413
Tumor
0.2
331
Tumor
0.2
867
Tumor
0.2
536
Normal
0.2
573
Tumor
0.2
513
Tumor
0.1
713
Tumor
0.1
617
Tumor
0.1
554
Normal
0.1
313
Tumor
0.1
785
Tumor
0.1
963
Tumor
0.1
545
Tumor
0.1
1015
Tumor
0.1
137
Tumor
0.1
421
Tumor
0.1
917
Tumor
0.1
415
Tumor
0.1
447
Tumor
0.1
481
Tumor
0.1
353
Tumor
0.1
777
Tumor
0.1
341
Tumor
0.1
271
Tumor
0.1
491
Tumor
0.1
815
Tumor
0.1
873
Tumor
0.1
425
Tumor
0.1
435
Tumor
0.0
755
Tumor
0.0
127
Tumor
0.0
433
Tumor
0.0
261
Tumor
0.0
857
Tumor
0.0
824
Normal
0.0
1014
Normal
0.0
1045
Tumor
0.0
647
Tumor
0.0
978
Normal
0.0
922
Normal
0.0
918
Normal
0.0
926
Normal
0.0
297
Tumor
0.0
968
Normal
0.0
982
Normal
0.0
528
Normal
0.0
714
Normal
0.0
984
Normal
0.0
524
Normal
0.0
461
Tumor
0.0
863
Tumor
0.0
534
Normal
0.0
498
Normal
0.0
966
Normal
0.0
696
Normal
0.0
213
Tumor
0.0
958
Normal
0.0
484
Normal
0.0
518
Normal
0.0
944
Normal
0.0
365
Tumor
0.0
716
Normal
0.0
423
Tumor
0.0
286
Normal
0.0
546
Normal
0.0
141
Tumor
0.0
478
Normal
0.0
1016
Normal
-0.1
661
Tumor
-0.1
912
Normal
-0.1
494
Normal
-0.1
387
Tumor
-0.1
852
Normal
-0.1
786
Normal
-0.1
472
Normal
-0.1
818
Normal
-0.1
858
Normal
-0.1
916
Normal
-0.1
474
Normal
-0.1
778
Normal
-0.1
938
Normal
-0.1
1028
Normal
-0.1
884
Normal
-0.1
816
Normal
-0.1
488
Normal
-0.1
1032
Normal
-0.1
746
Normal
-0.1
924
Normal
-0.1
964
Normal
-0.1
864
Normal
-0.1
627
Tumor
-0.1
1046
Normal
-0.1
563
Tumor
-0.1
462
Normal
-0.1
455
Tumor
-0.1
538
Normal
-0.1
448
Normal
-0.1
1022
Normal
-0.1
526
Normal
-0.1
217
Tumor
-0.1
814
Normal
-0.1
212
Normal
-0.1
492
Normal
-0.1
571
Tumor
-0.1
393
Tumor
-0.1
756
Normal
-0.1
723
Tumor
-0.1
866
Normal
-0.1
695
Tumor
-0.1
351
Tumor
-0.1
952
Normal
-0.1
482
Normal
-0.1
284
Normal
-0.1
357
Tumor
-0.1
1026
Normal
-0.1
514
Normal
-0.1
1044
Normal
-0.1
615
Tumor
-0.1
311
Tumor
-0.1
558
Normal
-0.1
862
Normal
-0.1
686
Normal
-0.2
954
Normal
-0.2
125
Tumor
-0.2
431
Tumor
-0.2
882
Normal
-0.2
813
Tumor
-0.2
383
Tumor
-0.2
572
Normal
-0.2
391
Tumor
-0.2
568
Normal
-0.2
228
Normal
-0.2
516
Normal
-0.2
343
Tumor
-0.2
328
Normal
-0.2
332
Normal
-0.2
483
Tumor
-0.2
742
Normal
-0.2
976
Normal
-0.2
728
Normal
-0.2
412
Normal
-0.2
616
Normal
-0.2
868
Normal
-0.2
195
Tumor
-0.2
1042
Normal
-0.2
364
Normal
-0.2
874
Normal
-0.2
196
Normal
-0.2
722
Normal
-0.2
878
Normal
-0.2
232
Normal
-0.3
741
Tumor
-0.3
416
Normal
-0.3
636
Normal
-0.3
664
Normal
-0.3
227
Tumor
-0.3
268
Normal
-0.3
956
Normal
-0.3
218
Normal
-0.3
298
Normal
-0.3
262
Normal
-0.3
465
Tumor
-0.3
628
Normal
-0.3
361
Tumor
-0.3
698
Normal
-0.3
914
Normal
-0.3
222
Normal
-0.3
436
Normal
-0.3
564
Normal
-0.3
148
Normal
-0.3
258
Normal
-0.3
224
Normal
-0.3
738
Normal
-0.3
312
Normal
-0.3
142
Normal
-0.3
662
Normal
-0.3
574
Normal
-0.3
314
Normal
-0.3
648
Normal
-0.3
642
Normal
-0.3
356
Normal
-0.3
278
Normal
-0.3
618
Normal
-0.3
192
Normal
-0.4
672
Normal
-0.4
428
Normal
-0.4
424
Normal
-0.4
214
Normal
-0.4
666
Normal
-0.4
162
Normal
-0.4
352
Normal
-0.4
186
Normal
-0.4
138
Normal
-0.4
132
Normal
-0.4
446
Normal
-0.4
392
Normal
-0.4
466
Normal
-0.4
396
Normal
-0.4
464
Normal
-0.4
172
Normal
-0.4
111
Normal
-0.4
422
Normal
-0.4
468
Normal
-0.4
444
Normal
-0.4
136
Normal
-0.4
272
Normal
-0.4
146
Normal
-0.4
456
Normal
-0.4
384
Normal
-0.4
358
Normal
-0.4
114
Normal
-0.4
744
Normal
-0.4
362
Normal
-0.5
124
Normal
-0.5
414
Normal
-0.5
188
Normal
-0.5
394
Normal
-0.5
434
Normal
-0.5
386
Normal
-0.5
426
Normal
-0.5
126
Normal
-0.5
344
Normal
-0.5
376
Normal
-0.5
368
Normal
-0.5
388
Normal
-0.5
452
Normal
-0.5
432
Normal
-0.5
342
Normal
-0.5
128
Normal
-0.5
354
Normal
-0.5
366
Normal
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.