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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZFP36L1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
399.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
382.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
236.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
226.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
201.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
197.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
194.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
192.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
191.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
182.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
181.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
179.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
178.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
172.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
167.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
165.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
163.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
160.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
153.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
153.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
153.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
151.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
151.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
149.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
147.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
145.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
145.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
143.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
140.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
140.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
139.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
138.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
137.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
136.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
135.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
134.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
133.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
132.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
131.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
130.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
129.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
129.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
124.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
123.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
123.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
122.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
122.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
120.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
120.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
119.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
119.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
119.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
117.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
117.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
117.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
116.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
115.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
114.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
113.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
113.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
113.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
112.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
112.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
111.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
111.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
110.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
108.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
108.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
107.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
107.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
107.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
106.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
106.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
106.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
105.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
104.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
103.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
103.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
103.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
102.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
101.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
100.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
100.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
99.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
99.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
98.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
98.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
97.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
97.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
97.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
96.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
96.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
96.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
96.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
96.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
95.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
95.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
95.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
94.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
93.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
93.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
93.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
92.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
92.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
90.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
90.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
89.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
89.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
89.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
88.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
88.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
88.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
87.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
86.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
86.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
85.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
85.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
84.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
84.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
84.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
83.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
83.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
83.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
82.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
82.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
81.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
81.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
81.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
81.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
80.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
80.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
80.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
80.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
79.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
78.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
78.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
78.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
78.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
77.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
77.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
77.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
77.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
77.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
76.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
76.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
76.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
76.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
75.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
75.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
74.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
74.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
74.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
74.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
74.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
73.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
73.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
73.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
73.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
72.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
72.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
72.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
72.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
70.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
70.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
70.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
70.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
70.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
69.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
69.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
68.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
68.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
68.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
68.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
68.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
68.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
68.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
68.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
67.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
67.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
67.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
67.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
67.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
66.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
66.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
66.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
66.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
65.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
65.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
65.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
65.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
65.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
65.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
64.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
64.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
64.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
64.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
64.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
64.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
63.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
63.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
62.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
62.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
62.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
62.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
61.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
61.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
61.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
61.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
61.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
60.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
58.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
58.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
57.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
57.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
56.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
56.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
56.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
55.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
55.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
55.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
55.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
54.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
54.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
54.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
53.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
52.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
52.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
52.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
52.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
52.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
52.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
51.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
51.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
51.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
51.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
50.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
49.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
49.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
49.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
48.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
48.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
48.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
48.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
47.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
47.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
47.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
47.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
47.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
47.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
46.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
46.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
46.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
46.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
46.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
45.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
45.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
45.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
45.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
45.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
45.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
45.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
45.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
45.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
45.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
45.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
44.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
44.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
44.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
44.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
43.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
43.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
43.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
43.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
43.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
43.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
42.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
42.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
42.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
42.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
41.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
41.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
41.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
40.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
40.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
39.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
39.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
39.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
39.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
39.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
38.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
38.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
38.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
38.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
38.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
38.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
37.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
37.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
36.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
36.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
36.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
35.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
35.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
35.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
34.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
34.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
34.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
34.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
34.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
34.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
33.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
33.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
33.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
33.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
33.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
32.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
32.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
32.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
32.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
32.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
32.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
32.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
31.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
31.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
30.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
29.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
29.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
28.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
28.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
28.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
28.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
28.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
28.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
27.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
26.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
26.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
24.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
24.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
24.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
23.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
22.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
22.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
22.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
22.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
20.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
20.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
19.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
18.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
17.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
17.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
16.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
15.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
14.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
14.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
14.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
12.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
11.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
10.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
10.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZFP36L1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.9
Number of samples
231
Samples
Sample
Description
TPM
DO48732
0 years, male, NA, stage:3, alive, 630 days
409.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
312.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
299.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
297.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
281.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
278.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
277.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
251.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
244.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
241.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
236.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
235.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
235.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
230.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
224.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
218.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
216.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
210.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
199.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
196.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
194.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
194.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
193.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
192.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
189.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
188.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
184.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
184.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
184.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
183.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
181.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
179.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
179.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
177.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
175.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
174.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
172.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
172.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
170.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
169.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
168.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
168.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
168.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
165.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
164.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
164.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
162.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
160.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
158.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
157.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
157.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
156.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
156.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
154.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
154.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
154.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
153.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
152.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
152.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
151.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
150.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
150.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
146.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
146.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
146.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
146.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
145.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
143.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
142.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
142.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
140.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
139.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
139.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
139.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
138.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
138.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
137.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
136.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
136.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
135.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
134.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
134.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
134.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
133.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
133.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
133.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
130.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
130.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
130.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
129.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
128.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
128.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
127.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
124.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
123.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
123.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
123.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
123.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
122.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
122.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
121.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
120.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
119.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
118.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
117.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
117.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
117.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
116.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
116.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
116.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
115.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
115.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
114.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
114.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
113.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
113.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
112.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
112.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
111.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
111.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
111.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
110.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
110.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
109.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
109.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
109.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
108.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
107.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
107.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
106.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
106.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
106.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
105.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
105.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
105.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
105.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
104.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
104.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
102.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
102.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
102.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
100.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
100.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
99.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
98.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
98.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
98.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
97.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
97.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
97.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
97.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
96.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
95.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
95.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
95.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
95.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
95.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
94.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
94.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
94.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
93.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
93.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
93.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
92.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
91.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
91.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
90.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
90.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
90.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
90.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
89.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
88.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
87.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
86.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
85.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
84.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
84.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
83.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
83.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
80.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
80.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
79.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
79.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
77.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
77.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
77.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
77.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
76.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
75.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
75.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
74.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
73.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
72.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
72.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
72.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
72.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
72.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
71.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
69.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
69.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
68.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
68.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
67.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
66.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
66.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
65.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
65.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
65.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
63.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
63.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
62.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
62.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
61.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
56.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
55.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
51.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
51.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
50.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
49.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
49.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
47.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
45.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
42.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
41.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
40.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
40.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
36.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
34.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
30.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
30.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
26.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
913
Tumor
1.4
911
Tumor
1.1
663
Tumor
0.9
944
Normal
0.8
283
Tumor
0.7
1022
Normal
0.7
227
Tumor
0.7
943
Tumor
0.6
1013
Tumor
0.6
918
Normal
0.6
1042
Normal
0.6
411
Tumor
0.6
431
Tumor
0.5
574
Normal
0.5
525
Tumor
0.5
878
Normal
0.5
364
Normal
0.5
564
Normal
0.5
568
Normal
0.5
1032
Normal
0.5
1026
Normal
0.5
125
Tumor
0.5
516
Normal
0.5
218
Normal
0.4
473
Tumor
0.4
376
Normal
0.4
363
Tumor
0.4
956
Normal
0.4
312
Normal
0.4
984
Normal
0.4
1045
Tumor
0.4
353
Tumor
0.4
958
Normal
0.4
472
Normal
0.4
518
Normal
0.4
272
Normal
0.4
1014
Normal
0.4
723
Tumor
0.4
955
Tumor
0.4
211
Tumor
0.4
558
Normal
0.4
267
Tumor
0.4
492
Normal
0.4
1016
Normal
0.4
954
Normal
0.4
343
Tumor
0.4
482
Normal
0.4
474
Normal
0.4
536
Normal
0.3
462
Normal
0.3
161
Tumor
0.3
982
Normal
0.3
714
Normal
0.3
222
Normal
0.3
976
Normal
0.3
554
Normal
0.3
366
Normal
0.3
573
Tumor
0.3
286
Normal
0.3
1041
Tumor
0.3
756
Normal
0.3
171
Tumor
0.3
926
Normal
0.3
232
Normal
0.3
964
Normal
0.3
746
Normal
0.3
866
Normal
0.3
145
Tumor
0.3
572
Normal
0.3
874
Normal
0.3
172
Normal
0.3
742
Normal
0.3
298
Normal
0.3
162
Normal
0.3
924
Normal
0.3
386
Normal
0.3
534
Normal
0.3
914
Normal
0.3
524
Normal
0.3
328
Normal
0.3
1046
Normal
0.3
864
Normal
0.3
786
Normal
0.3
744
Normal
0.3
416
Normal
0.3
456
Normal
0.3
428
Normal
0.3
355
Tumor
0.3
375
Tumor
0.3
148
Normal
0.3
697
Tumor
0.3
526
Normal
0.3
884
Normal
0.3
357
Tumor
0.3
636
Normal
0.3
862
Normal
0.3
546
Normal
0.3
465
Tumor
0.3
728
Normal
0.2
695
Tumor
0.2
698
Normal
0.2
362
Normal
0.2
214
Normal
0.2
344
Normal
0.2
922
Normal
0.2
445
Tumor
0.2
356
Normal
0.2
1043
Tumor
0.2
528
Normal
0.2
571
Tumor
0.2
664
Normal
0.2
917
Tumor
0.2
427
Tumor
0.2
877
Tumor
0.2
217
Tumor
0.2
192
Normal
0.2
424
Normal
0.2
1044
Normal
0.2
514
Normal
0.2
412
Normal
0.2
873
Tumor
0.2
365
Tumor
0.2
221
Tumor
0.2
553
Tumor
0.2
672
Normal
0.2
977
Tumor
0.2
883
Tumor
0.2
262
Normal
0.2
393
Tumor
0.2
533
Tumor
0.2
713
Tumor
0.2
882
Normal
0.2
642
Normal
0.2
466
Normal
0.2
258
Normal
0.2
916
Normal
0.2
666
Normal
0.2
966
Normal
0.2
186
Normal
0.2
648
Normal
0.2
415
Tumor
0.2
1028
Normal
0.2
952
Normal
0.2
953
Tumor
0.2
662
Normal
0.1
738
Normal
0.1
628
Normal
0.1
563
Tumor
0.1
567
Tumor
0.1
484
Normal
0.1
461
Tumor
0.1
132
Normal
0.1
228
Normal
0.1
861
Tumor
0.1
716
Normal
0.1
187
Tumor
0.1
938
Normal
0.1
468
Normal
0.1
537
Tumor
0.1
188
Normal
0.1
191
Tumor
0.1
478
Normal
0.1
661
Tumor
0.1
452
Normal
0.1
342
Normal
0.1
367
Tumor
0.1
268
Normal
0.1
498
Normal
0.1
778
Normal
0.1
497
Tumor
0.1
423
Tumor
0.1
937
Tumor
0.1
813
Tumor
0.1
137
Tumor
0.1
477
Tumor
0.1
515
Tumor
0.1
983
Tumor
0.1
491
Tumor
0.1
464
Normal
0.1
493
Tumor
0.1
446
Normal
0.1
777
Tumor
0.1
448
Normal
0.1
481
Tumor
0.1
138
Normal
0.1
535
Tumor
0.1
817
Tumor
0.1
867
Tumor
0.1
278
Normal
0.1
538
Normal
0.1
745
Tumor
0.1
352
Normal
0.1
671
Tumor
0.1
128
Normal
0.0
968
Normal
0.0
868
Normal
0.0
967
Tumor
0.0
196
Normal
0.0
981
Tumor
0.0
231
Tumor
0.0
224
Normal
0.0
136
Normal
0.0
285
Tumor
0.0
814
Normal
0.0
384
Normal
0.0
114
Normal
0.0
915
Tumor
0.0
881
Tumor
0.0
557
Tumor
0.0
313
Tumor
0.0
358
Normal
0.0
951
Tumor
0.0
354
Normal
0.0
471
Tumor
0.0
426
Normal
0.0
494
Normal
0.0
963
Tumor
0.0
721
Tumor
0.0
142
Normal
0.0
284
Normal
0.0
361
Tumor
0.0
332
Normal
0.0
824
Normal
0.0
124
Normal
0.0
665
Tumor
0.0
851
Tumor
0.0
141
Tumor
0.0
978
Normal
0.0
436
Normal
0.0
686
Normal
0.0
513
Tumor
0.0
212
Normal
0.0
126
Normal
0.0
858
Normal
0.0
912
Normal
0.0
1025
Tumor
0.0
147
Tumor
0.0
314
Normal
0.0
368
Normal
0.0
261
Tumor
0.0
641
Tumor
0.0
957
Tumor
0.0
627
Tumor
-0.1
488
Normal
-0.1
396
Normal
-0.1
414
Normal
-0.1
435
Tumor
-0.1
331
Tumor
-0.1
722
Normal
-0.1
527
Tumor
-0.1
131
Tumor
-0.1
146
Normal
-0.1
965
Tumor
-0.1
737
Tumor
-0.1
617
Tumor
-0.1
311
Tumor
-0.1
213
Tumor
-0.1
696
Normal
-0.1
185
Tumor
-0.1
455
Tumor
-0.1
685
Tumor
-0.1
724
Normal
-0.1
816
Normal
-0.1
195
Tumor
-0.1
618
Normal
-0.1
467
Tumor
-0.1
635
Tumor
-0.1
451
Tumor
-0.1
422
Normal
-0.1
434
Normal
-0.1
865
Tumor
-0.1
727
Tumor
-0.1
327
Tumor
-0.1
447
Tumor
-0.1
852
Normal
-0.2
863
Tumor
-0.2
1031
Tumor
-0.2
857
Tumor
-0.2
112
Tumor
-0.2
383
Tumor
-0.2
444
Normal
-0.2
647
Tumor
-0.2
545
Tumor
-0.2
921
Tumor
-0.2
385
Tumor
-0.2
818
Normal
-0.2
785
Tumor
-0.2
111
Normal
-0.2
123
Tumor
-0.2
297
Tumor
-0.2
616
Normal
-0.2
394
Normal
-0.2
391
Tumor
-0.2
135
Tumor
-0.2
925
Tumor
-0.2
975
Tumor
-0.2
755
Tumor
-0.2
1015
Tumor
-0.2
463
Tumor
-0.2
523
Tumor
-0.2
483
Tumor
-0.2
271
Tumor
-0.2
923
Tumor
-0.2
277
Tumor
-0.2
1021
Tumor
-0.2
487
Tumor
-0.2
388
Normal
-0.2
517
Tumor
-0.2
392
Normal
-0.3
432
Normal
-0.3
425
Tumor
-0.3
257
Tumor
-0.3
823
Tumor
-0.3
615
Tumor
-0.3
741
Tumor
-0.3
715
Tumor
-0.3
113
Tumor
-0.3
413
Tumor
-0.3
433
Tumor
-0.3
421
Tumor
-0.3
351
Tumor
-0.3
223
Tumor
-0.4
341
Tumor
-0.4
443
Tumor
-0.4
743
Tumor
-0.4
127
Tumor
-0.5
387
Tumor
-0.5
395
Tumor
-0.5
815
Tumor
-0.6
1027
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
