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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P4HB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
726.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
3864.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3581.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2688.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2610.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2423.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
2403.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2332.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1873.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1814.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1788.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1724.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1722.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1670.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1664.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1654.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1639.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1609.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1582.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1466.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1462.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1452.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1426.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1407.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1396.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1393.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1367.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1361.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1345.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1326.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1321.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1305.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1291.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1274.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1272.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1255.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1245.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1233.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1232.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1230.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1230.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1218.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1216.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1201.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1194.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1189.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1187.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1185.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1181.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1181.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1180.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1176.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1171.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1160.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1151.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1149.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1143.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1128.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1124.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1124.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1117.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1109.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1108.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1098.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1094.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1093.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1089.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1086.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1080.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1080.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1077.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1059.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1049.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1033.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1022.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1007.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1005.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
999.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
986.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
983.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
977.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
971.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
969.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
965.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
957.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
956.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
951.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
948.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
945.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
939.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
939.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
938.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
938.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
931.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
931.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
928.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
928.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
925.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
919.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
918.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
916.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
911.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
906.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
905.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
904.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
904.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
887.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
880.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
876.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
875.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
874.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
862.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
860.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
859.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
857.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
851.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
849.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
845.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
844.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
837.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
837.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
834.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
830.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
824.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
823.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
823.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
809.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
808.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
808.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
805.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
802.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
799.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
798.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
795.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
793.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
793.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
791.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
791.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
790.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
781.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
776.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
768.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
757.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
751.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
742.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
740.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
737.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
730.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
728.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
725.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
722.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
720.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
720.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
720.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
719.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
718.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
717.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
717.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
717.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
714.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
713.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
712.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
707.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
703.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
698.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
695.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
691.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
686.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
686.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
685.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
684.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
682.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
682.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
681.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
678.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
670.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
662.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
662.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
657.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
656.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
653.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
653.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
649.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
642.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
640.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
640.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
637.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
637.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
635.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
634.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
633.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
632.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
632.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
627.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
626.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
623.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
621.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
621.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
621.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
619.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
617.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
614.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
603.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
601.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
599.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
598.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
589.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
589.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
587.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
585.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
577.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
577.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
576.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
575.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
568.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
566.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
565.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
565.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
565.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
565.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
557.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
555.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
554.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
553.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
552.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
550.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
546.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
546.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
542.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
538.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
536.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
534.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
532.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
531.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
518.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
517.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
517.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
512.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
510.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
505.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
505.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
499.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
499.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
497.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
495.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
490.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
490.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
487.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
486.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
482.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
480.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
477.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
474.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
473.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
468.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
467.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
466.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
464.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
463.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
458.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
456.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
455.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
454.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
452.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
448.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
448.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
446.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
437.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
437.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
435.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
432.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
431.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
430.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
417.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
417.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
416.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
414.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
412.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
408.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
404.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
400.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
396.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
393.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
391.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
385.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
374.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
367.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
363.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
362.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
359.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
359.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
358.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
358.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
356.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
355.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
353.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
349.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
347.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
347.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
346.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
343.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
336.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
333.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
331.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
329.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
329.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
321.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
314.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
314.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
296.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
289.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
284.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
277.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
276.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
275.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
273.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
262.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
256.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
254.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
247.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
243.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
241.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
234.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
230.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
229.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
213.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
212.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
212.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
205.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
199.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
198.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
182.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
175.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
166.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
146.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
133.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
123.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
106.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
82.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
80.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
79.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
63.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
58.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
39.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
38.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
36.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
35.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
31.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
26.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
22.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
21.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
20.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
18.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
18.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
9.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
9.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P4HB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
755.3
Number of samples
231
Samples
Sample
Description
TPM
DO45093
0 years, male, NA, stage:2, dead, 720 days
2445.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
2191.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
1917.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
1743.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
1659.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1572.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
1535.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
1478.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
1440.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1400.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
1400.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
1369.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
1351.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
1335.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1319.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
1314.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
1311.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
1303.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
1272.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1247.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
1229.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1223.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
1213.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1210.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
1208.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1205.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1203.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1156.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1139.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
1126.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1118.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1108.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
1102.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1086.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1081.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
1077.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
1077.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
1067.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1066.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
1044.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
1039.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
1037.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
1026.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
1025.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
1018.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
991.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
984.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
965.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
943.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
939.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
938.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
929.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
921.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
899.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
896.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
894.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
891.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
887.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
884.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
873.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
870.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
869.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
863.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
861.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
853.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
852.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
845.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
845.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
826.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
819.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
811.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
810.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
805.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
796.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
794.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
790.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
790.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
789.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
782.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
781.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
780.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
780.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
775.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
772.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
771.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
767.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
767.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
761.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
755.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
755.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
755.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
753.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
751.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
744.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
735.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
734.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
728.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
728.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
721.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
716.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
716.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
709.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
707.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
704.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
702.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
697.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
696.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
693.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
691.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
689.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
681.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
679.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
675.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
672.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
671.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
668.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
666.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
664.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
664.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
663.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
663.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
662.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
661.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
658.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
657.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
654.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
654.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
653.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
652.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
651.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
650.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
649.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
649.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
639.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
638.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
638.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
632.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
628.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
628.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
622.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
621.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
610.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
610.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
605.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
605.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
605.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
600.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
598.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
596.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
596.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
590.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
589.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
586.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
586.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
584.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
584.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
583.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
582.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
581.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
581.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
581.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
579.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
576.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
576.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
566.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
565.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
561.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
561.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
561.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
557.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
556.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
552.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
549.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
548.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
544.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
541.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
540.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
540.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
537.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
535.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
534.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
532.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
527.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
526.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
522.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
519.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
514.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
501.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
494.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
490.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
489.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
479.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
473.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
472.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
471.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
465.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
463.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
462.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
461.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
453.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
450.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
441.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
433.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
432.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
431.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
428.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
418.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
415.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
413.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
406.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
397.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
396.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
382.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
382.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
376.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
376.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
364.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
358.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
358.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
330.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
317.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
310.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
302.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
292.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
289.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
287.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
286.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
279.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
260.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
260.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
195.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
1.1
745
Tumor
1.0
857
Tumor
0.8
777
Tumor
0.8
195
Tumor
0.7
477
Tumor
0.7
863
Tumor
0.6
981
Tumor
0.6
1027
Tumor
0.6
727
Tumor
0.6
435
Tumor
0.6
481
Tumor
0.6
137
Tumor
0.6
527
Tumor
0.6
357
Tumor
0.6
375
Tumor
0.6
937
Tumor
0.5
741
Tumor
0.5
433
Tumor
0.5
227
Tumor
0.5
1015
Tumor
0.5
423
Tumor
0.4
393
Tumor
0.4
353
Tumor
0.4
1014
Normal
0.4
445
Tumor
0.4
1044
Normal
0.3
955
Tumor
0.3
868
Normal
0.3
257
Tumor
0.3
978
Normal
0.3
813
Tumor
0.3
387
Tumor
0.3
944
Normal
0.3
525
Tumor
0.3
125
Tumor
0.3
636
Normal
0.3
922
Normal
0.3
918
Normal
0.3
1021
Tumor
0.3
361
Tumor
0.3
778
Normal
0.3
938
Normal
0.3
866
Normal
0.2
514
Normal
0.2
528
Normal
0.2
953
Tumor
0.2
368
Normal
0.2
714
Normal
0.2
327
Tumor
0.2
968
Normal
0.2
878
Normal
0.2
738
Normal
0.2
816
Normal
0.2
356
Normal
0.2
615
Tumor
0.2
412
Normal
0.2
728
Normal
0.2
467
Tumor
0.2
328
Normal
0.2
984
Normal
0.2
723
Tumor
0.2
395
Tumor
0.2
526
Normal
0.2
286
Normal
0.2
952
Normal
0.2
466
Normal
0.2
1016
Normal
0.2
488
Normal
0.2
698
Normal
0.2
786
Normal
0.2
494
Normal
0.2
696
Normal
0.2
212
Normal
0.2
484
Normal
0.2
1022
Normal
0.2
746
Normal
0.2
926
Normal
0.2
923
Tumor
0.1
864
Normal
0.1
852
Normal
0.1
982
Normal
0.1
814
Normal
0.1
426
Normal
0.1
392
Normal
0.1
554
Normal
0.1
363
Tumor
0.1
462
Normal
0.1
355
Tumor
0.1
648
Normal
0.1
697
Tumor
0.1
756
Normal
0.1
722
Normal
0.1
534
Normal
0.1
142
Normal
0.1
912
Normal
0.1
314
Normal
0.1
572
Normal
0.1
284
Normal
0.1
1026
Normal
0.1
452
Normal
0.1
518
Normal
0.1
964
Normal
0.1
482
Normal
0.1
111
Normal
0.1
1032
Normal
0.1
916
Normal
0.1
925
Tumor
0.1
686
Normal
0.1
685
Tumor
0.1
228
Normal
0.1
468
Normal
0.1
874
Normal
0.1
1046
Normal
0.1
824
Normal
0.1
721
Tumor
0.1
742
Normal
0.1
1028
Normal
0.1
642
Normal
0.1
755
Tumor
0.1
867
Tumor
0.1
232
Normal
0.1
376
Normal
0.1
128
Normal
0.1
474
Normal
0.1
924
Normal
0.1
394
Normal
0.1
132
Normal
0.1
616
Normal
0.0
148
Normal
0.0
448
Normal
0.0
818
Normal
0.0
172
Normal
0.0
261
Tumor
0.0
956
Normal
0.0
976
Normal
0.0
218
Normal
0.0
963
Tumor
0.0
112
Tumor
0.0
114
Normal
0.0
414
Normal
0.0
258
Normal
0.0
1042
Normal
0.0
628
Normal
0.0
618
Normal
0.0
958
Normal
0.0
557
Tumor
0.0
957
Tumor
0.0
1013
Tumor
0.0
364
Normal
0.0
424
Normal
0.0
558
Normal
0.0
862
Normal
0.0
882
Normal
0.0
914
Normal
0.0
744
Normal
0.0
1043
Tumor
0.0
884
Normal
0.0
954
Normal
0.0
564
Normal
0.0
446
Normal
0.0
138
Normal
0.0
858
Normal
0.0
422
Normal
0.0
911
Tumor
0.0
332
Normal
0.0
472
Normal
0.0
162
Normal
0.0
497
Tumor
-0.1
568
Normal
-0.1
298
Normal
-0.1
546
Normal
-0.1
915
Tumor
-0.1
436
Normal
-0.1
358
Normal
-0.1
416
Normal
-0.1
431
Tumor
-0.1
124
Normal
-0.1
873
Tumor
-0.1
113
Tumor
-0.1
136
Normal
-0.1
662
Normal
-0.1
147
Tumor
-0.1
196
Normal
-0.1
536
Normal
-0.1
861
Tumor
-0.1
492
Normal
-0.1
388
Normal
-0.1
262
Normal
-0.1
716
Normal
-0.1
513
Tumor
-0.1
222
Normal
-0.1
664
Normal
-0.1
498
Normal
-0.1
966
Normal
-0.1
524
Normal
-0.1
617
Tumor
-0.1
478
Normal
-0.1
362
Normal
-0.1
396
Normal
-0.1
223
Tumor
-0.1
186
Normal
-0.1
123
Tumor
-0.1
743
Tumor
-0.1
312
Normal
-0.1
464
Normal
-0.1
851
Tumor
-0.1
713
Tumor
-0.1
126
Normal
-0.1
214
Normal
-0.1
1045
Tumor
-0.1
443
Tumor
-0.2
224
Normal
-0.2
342
Normal
-0.2
883
Tumor
-0.2
737
Tumor
-0.2
515
Tumor
-0.2
983
Tumor
-0.2
567
Tumor
-0.2
516
Normal
-0.2
823
Tumor
-0.2
451
Tumor
-0.2
354
Normal
-0.2
695
Tumor
-0.2
977
Tumor
-0.2
432
Normal
-0.2
672
Normal
-0.2
573
Tumor
-0.2
268
Normal
-0.2
427
Tumor
-0.2
666
Normal
-0.2
1025
Tumor
-0.2
278
Normal
-0.2
365
Tumor
-0.2
272
Normal
-0.2
428
Normal
-0.2
574
Normal
-0.2
386
Normal
-0.2
145
Tumor
-0.2
411
Tumor
-0.2
352
Normal
-0.2
271
Tumor
-0.2
865
Tumor
-0.2
538
Normal
-0.3
415
Tumor
-0.3
366
Normal
-0.3
135
Tumor
-0.3
191
Tumor
-0.3
571
Tumor
-0.3
456
Normal
-0.3
384
Normal
-0.3
785
Tumor
-0.3
188
Normal
-0.3
663
Tumor
-0.3
351
Tumor
-0.3
421
Tumor
-0.3
434
Normal
-0.3
171
Tumor
-0.3
724
Normal
-0.3
951
Tumor
-0.3
523
Tumor
-0.3
444
Normal
-0.3
187
Tumor
-0.3
965
Tumor
-0.3
627
Tumor
-0.3
217
Tumor
-0.3
635
Tumor
-0.4
465
Tumor
-0.4
344
Normal
-0.4
161
Tumor
-0.4
127
Tumor
-0.4
447
Tumor
-0.4
917
Tumor
-0.4
341
Tumor
-0.4
285
Tumor
-0.4
553
Tumor
-0.4
277
Tumor
-0.4
146
Normal
-0.4
877
Tumor
-0.4
473
Tumor
-0.4
231
Tumor
-0.4
461
Tumor
-0.4
545
Tumor
-0.4
913
Tumor
-0.5
141
Tumor
-0.5
493
Tumor
-0.5
483
Tumor
-0.5
463
Tumor
-0.5
517
Tumor
-0.5
455
Tumor
-0.5
647
Tumor
-0.5
297
Tumor
-0.6
311
Tumor
-0.6
131
Tumor
-0.6
383
Tumor
-0.6
267
Tumor
-0.6
185
Tumor
-0.6
367
Tumor
-0.6
283
Tumor
-0.6
563
Tumor
-0.6
491
Tumor
-0.6
817
Tumor
-0.7
343
Tumor
-0.7
213
Tumor
-0.7
192
Normal
-0.7
471
Tumor
-0.7
921
Tumor
-0.7
943
Tumor
-0.7
391
Tumor
-0.7
975
Tumor
-0.8
1041
Tumor
-0.8
487
Tumor
-0.8
537
Tumor
-0.8
665
Tumor
-0.8
331
Tumor
-0.8
221
Tumor
-0.8
661
Tumor
-0.8
881
Tumor
-0.8
671
Tumor
-0.8
413
Tumor
-0.8
385
Tumor
-0.9
815
Tumor
-0.9
313
Tumor
-0.9
535
Tumor
-0.9
967
Tumor
-1.0
715
Tumor
-1.0
1031
Tumor
-1.0
425
Tumor
-1.0
641
Tumor
-1.1
211
Tumor
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.