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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
3.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
3.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
3.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
0.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
0.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
0.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
0.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
0.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
0.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
0.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
0.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
0.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
0.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
0.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
0.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
0.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
0.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
0.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
0.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
0.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
0.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
0.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
0.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
0.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
0.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
0.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
0.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
0.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
0.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
0.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
0.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
0.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
0.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
0.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
0.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
0.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
0.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
0.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
0.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
0.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
0.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
0.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
0.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
0.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
0.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
0.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
0.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
0.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
0.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
0.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
0.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
0.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
0.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
0.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
0.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
0.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
0.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
0.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
0.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
0.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
0.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
0.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
0.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
0.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
0.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
0.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
0.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
0.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
0.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
0.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
0.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
0.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
0.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
0.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
0.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
0.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
0.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
0.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
0.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
0.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
0.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
0.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
0.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
0.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
0.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
0.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
0.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
0.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
0.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
0.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
0.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
0.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
0.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
0.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
0.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
0.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
0.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
0.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
0.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
0.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
0.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
0.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
0.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
0.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
0.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
0.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
0.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
0.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
0.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
0.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
0.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
0.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
0.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
0.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
0.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
0.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
0.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
0.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
0.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
0.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
0.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
0.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
0.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
0.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
0.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
0.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
0.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
0.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
0.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
0.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
0.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
0.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
0.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.1
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
6.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
1.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
1.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
1.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
0.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
0.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
0.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
0.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
0.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
0.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
0.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
0.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
0.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
0.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
0.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
0.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
0.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
0.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
0.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
0.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
0.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
0.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
0.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
0.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
0.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
0.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
0.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
0.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
0.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
0.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
0.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
0.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
0.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
0.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
0.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
0.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
0.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
0.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
0.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
0.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
0.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
0.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
0.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
0.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
0.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
0.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
0.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
0.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
0.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
0.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
0.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
0.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
0.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
0.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
0.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
0.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
0.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
0.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
0.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
0.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
0.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
0.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
0.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
0.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
0.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
0.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
0.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
0.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
0.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
0.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
0.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
0.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
0.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
0.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
0.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
0.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
0.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
0.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
0.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
0.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
0.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
0.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
0.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
0.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
0.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
0.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
0.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
0.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
0.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
0.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
0.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
0.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
0.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
0.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
0.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
0.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
0.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
0.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
0.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
0.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
0.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
0.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
0.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
0.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
0.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
0.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
0.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
0.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
0.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
0.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
0.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
0.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
0.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
0.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
0.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
0.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
0.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
0.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
0.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
0.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
0.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
0.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
0.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
0.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
0.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
0.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
0.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
0.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
0.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
0.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
0.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
0.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
0.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
0.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
0.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
0.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
0.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
0.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
0.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
0.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
0.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
0.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
0.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
0.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
0.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
0.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
0.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
3.2
917
Tumor
2.1
444
Normal
1.8
535
Tumor
1.7
1044
Normal
1.6
536
Normal
1.4
413
Tumor
1.4
492
Normal
1.3
963
Tumor
1.3
878
Normal
1.3
916
Normal
1.2
311
Tumor
1.2
816
Normal
1.1
874
Normal
1.0
814
Normal
1.0
472
Normal
1.0
1032
Normal
0.9
516
Normal
0.9
192
Normal
0.9
538
Normal
0.9
958
Normal
0.9
386
Normal
0.8
491
Tumor
0.8
447
Tumor
0.8
474
Normal
0.8
448
Normal
0.8
572
Normal
0.8
224
Normal
0.7
976
Normal
0.7
554
Normal
0.7
1022
Normal
0.7
185
Tumor
0.7
943
Tumor
0.7
966
Normal
0.6
882
Normal
0.6
818
Normal
0.6
285
Tumor
0.6
918
Normal
0.6
574
Normal
0.6
188
Normal
0.6
968
Normal
0.6
354
Normal
0.6
478
Normal
0.6
924
Normal
0.6
697
Tumor
0.5
312
Normal
0.5
146
Normal
0.5
482
Normal
0.5
817
Tumor
0.5
364
Normal
0.5
864
Normal
0.5
1042
Normal
0.5
514
Normal
0.5
982
Normal
0.5
938
Normal
0.5
852
Normal
0.4
494
Normal
0.4
416
Normal
0.4
546
Normal
0.4
642
Normal
0.4
344
Normal
0.4
524
Normal
0.4
1016
Normal
0.4
628
Normal
0.4
342
Normal
0.4
138
Normal
0.4
148
Normal
0.4
498
Normal
0.4
922
Normal
0.4
412
Normal
0.3
954
Normal
0.3
332
Normal
0.3
352
Normal
0.3
978
Normal
0.3
394
Normal
0.3
314
Normal
0.3
672
Normal
0.3
956
Normal
0.3
425
Tumor
0.3
558
Normal
0.3
984
Normal
0.3
392
Normal
0.3
824
Normal
0.2
396
Normal
0.2
881
Tumor
0.2
228
Normal
0.2
298
Normal
0.2
1026
Normal
0.2
466
Normal
0.2
926
Normal
0.2
714
Normal
0.2
462
Normal
0.2
952
Normal
0.2
162
Normal
0.2
278
Normal
0.2
355
Tumor
0.2
356
Normal
0.2
434
Normal
0.2
328
Normal
0.2
873
Tumor
0.2
172
Normal
0.2
756
Normal
0.2
284
Normal
0.2
534
Normal
0.1
786
Normal
0.1
858
Normal
0.1
698
Normal
0.1
884
Normal
0.1
823
Tumor
0.1
1028
Normal
0.1
862
Normal
0.1
428
Normal
0.1
641
Tumor
0.1
866
Normal
0.1
813
Tumor
0.1
186
Normal
0.1
1014
Normal
0.1
426
Normal
0.1
722
Normal
0.1
616
Normal
0.1
636
Normal
0.0
618
Normal
0.0
414
Normal
0.0
488
Normal
0.0
456
Normal
0.0
484
Normal
0.0
218
Normal
0.0
385
Tumor
0.0
388
Normal
0.0
981
Tumor
0.0
468
Normal
0.0
142
Normal
0.0
415
Tumor
0.0
422
Normal
0.0
461
Tumor
0.0
424
Normal
0.0
327
Tumor
0.0
868
Normal
-0.1
914
Normal
-0.1
716
Normal
-0.1
1015
Tumor
-0.1
452
Normal
-0.1
1025
Tumor
-0.1
387
Tumor
-0.1
662
Normal
-0.1
187
Tumor
-0.1
191
Tumor
-0.1
222
Normal
-0.1
964
Normal
-0.1
297
Tumor
-0.1
696
Normal
-0.2
665
Tumor
-0.2
615
Tumor
-0.2
481
Tumor
-0.2
286
Normal
-0.2
214
Normal
-0.2
666
Normal
-0.2
1046
Normal
-0.2
213
Tumor
-0.2
212
Normal
-0.2
944
Normal
-0.2
363
Tumor
-0.2
136
Normal
-0.2
196
Normal
-0.2
331
Tumor
-0.2
161
Tumor
-0.2
518
Normal
-0.3
427
Tumor
-0.3
563
Tumor
-0.3
857
Tumor
-0.3
528
Normal
-0.3
313
Tumor
-0.3
455
Tumor
-0.3
721
Tumor
-0.3
132
Normal
-0.3
195
Tumor
-0.3
423
Tumor
-0.3
686
Normal
-0.3
627
Tumor
-0.3
617
Tumor
-0.3
137
Tumor
-0.4
635
Tumor
-0.4
217
Tumor
-0.4
785
Tumor
-0.4
883
Tumor
-0.4
436
Normal
-0.4
421
Tumor
-0.4
915
Tumor
-0.4
526
Normal
-0.4
411
Tumor
-0.4
171
Tumor
-0.5
464
Normal
-0.5
432
Normal
-0.5
867
Tumor
-0.5
746
Normal
-0.5
446
Normal
-0.5
713
Tumor
-0.5
1045
Tumor
-0.5
277
Tumor
-0.5
955
Tumor
-0.5
564
Normal
-0.5
471
Tumor
-0.5
923
Tumor
-0.6
664
Normal
-0.6
477
Tumor
-0.6
343
Tumor
-0.6
283
Tumor
-0.6
921
Tumor
-0.6
221
Tumor
-0.6
517
Tumor
-0.6
778
Normal
-0.6
227
Tumor
-0.6
1041
Tumor
-0.6
975
Tumor
-0.7
1021
Tumor
-0.7
815
Tumor
-0.7
1031
Tumor
-0.7
141
Tumor
-0.7
912
Normal
-0.7
135
Tumor
-0.7
145
Tumor
-0.7
877
Tumor
-0.7
433
Tumor
-0.8
755
Tumor
-0.8
358
Normal
-0.8
695
Tumor
-0.8
513
Tumor
-0.8
568
Normal
-0.8
851
Tumor
-0.8
147
Tumor
-0.9
395
Tumor
-0.9
493
Tumor
-0.9
483
Tumor
-0.9
1013
Tumor
-0.9
977
Tumor
-0.9
533
Tumor
-0.9
223
Tumor
-0.9
525
Tumor
-0.9
393
Tumor
-1.0
515
Tumor
-1.0
545
Tumor
-1.0
463
Tumor
-1.0
571
Tumor
-1.0
553
Tumor
-1.0
1027
Tumor
-1.0
497
Tumor
-1.0
863
Tumor
-1.0
983
Tumor
-1.0
451
Tumor
-1.0
465
Tumor
-1.1
861
Tumor
-1.1
967
Tumor
-1.1
353
Tumor
-1.1
537
Tumor
-1.1
648
Normal
-1.1
487
Tumor
-1.2
341
Tumor
-1.2
1043
Tumor
-1.2
391
Tumor
-1.2
865
Tumor
-1.3
435
Tumor
-1.3
557
Tumor
-1.3
527
Tumor
-1.3
131
Tumor
-1.3
467
Tumor
-1.4
523
Tumor
-1.4
965
Tumor
-1.4
715
Tumor
-1.4
443
Tumor
-1.5
473
Tumor
-1.5
911
Tumor
-1.5
661
Tumor
-1.5
925
Tumor
-1.6
431
Tumor
-1.6
567
Tumor
-1.6
685
Tumor
-1.6
573
Tumor
-1.7
445
Tumor
-1.7
351
Tumor
-1.7
957
Tumor
-1.8
357
Tumor
-1.9
913
Tumor
-1.9
777
Tumor
-2.0
663
Tumor
-2.0
647
Tumor
-2.2
745
Tumor
-2.3
951
Tumor
-2.3
937
Tumor
-2.4
953
Tumor
-2.4
671
Tumor
-2.4
231
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
114
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
267
Tumor
N/A
268
Normal
N/A
271
Tumor
N/A
272
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
737
Tumor
N/A
738
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.