HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.4 nTPM
HPA Brain:40.5 nTPM
GTEx:11.4 nTPM
FANTOM5:125.6 Scaled Tags Per Million
Pig:48.5 nTPM
Mouse:10.4 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 40.5
Sample id Sample description nTPM
Hippocampus
nTPM: 24.8
1855 Male, age 76, left hemisphere 31.6
2529 Female, age 94, left hemisphere 30.6
1898 Male, age 80, left hemisphere 26.7
1911 Female, age 85, right hemisphere 23.0
2621 Female, age 67, right hemisphere 20.6
2148 Female, age 91, left hemisphere 16.4
Dentate gyrus
nTPM: 23.1
2246 Female, age 85, both hemispheres 43.0
2528 Male, age 74, both hemispheres 22.8
2530 Female, age 94, left hemisphere 20.4
2531 Female, age 67, both hemispheres 19.9
2010 Male, age 76, both hemispheres 19.5
1927 Female, age 91, both hemispheres 13.0
Entorhinal gyrus
nTPM: 31.2
1787 Male, age 76, left hemisphere 41.9
2764 Male, age 80, right hemisphere 29.9
1938 Female, age 85, left hemisphere 29.7
2117 Female, age 91, right hemisphere 29.3
2686 Male, age 75, right hemisphere 28.7
2613 Female, age 94, left hemisphere 27.8
Hippocampus, CA1
nTPM: 26.4
2082 Female, age 91, right hemisphere 43.4
2527 Male, age 74, both hemispheres 32.1
2045 Male, age 76, both hemispheres 23.1
1873 Female, age 85, both hemispheres 21.4
2749 Male, age 80, left hemisphere 12.2
Hippocampus, CA2
nTPM: 28.7
1940 Female, age 85, left hemisphere 59.7
2113 Female, age 91, right hemisphere 37.2
2249 Male, age 74, both hemispheres 25.1
2437 Female, age 94, left hemisphere 20.6
1892 Male, age 76, both hemispheres 16.1
1963 Male, age 80, left hemisphere 13.4
Hippocampus, CA3
nTPM: 21.8
2436 Male, age 74, both hemispheres 32.8
1891 Female, age 85, both hemispheres 24.6
1867 Male, age 76, both hemispheres 21.7
2861 Female, age 67, both hemispheres 19.2
2620 Female, age 94, left hemisphere 16.3
2137 Male, age 80, left hemisphere 16.2
Parahippocampal cortex
nTPM: 34.7
1933 Female, age 85, both hemispheres 49.4
2250 Female, age 67, right hemisphere 47.6
1850 Male, age 80, both hemispheres 38.0
2692 Male, age 74, both hemispheres 34.8
2018 Male, age 76, both hemispheres 34.7
2622 Female, age 67, right hemisphere 33.0
2693 Female, age 94, both hemispheres 31.2
1990 Female, age 91, right hemisphere 27.9
2245 Female, age 91, both hemispheres 27.4
2532 Female, age 72, left hemisphere 23.5
Perirhinal gyrus
nTPM: 40.5
1847 Female, age 91, left hemisphere 51.3
1794 Male, age 80, right hemisphere 45.3
2521 Female, age 94, right hemisphere 41.2
2848 Male, age 76, right hemisphere 40.9
1841 Female, age 85, right hemisphere 23.7
Subiculum
nTPM: 28.6
2619 Male, age 74, both hemispheres 42.0
1977 Female, age 85, both hemispheres 35.9
2438 Female, age 94, left hemisphere 33.8
2729 Female, age 91, right hemisphere 25.7
2042 Male, age 76, both hemispheres 18.7
1901 Male, age 80, both hemispheres 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.4
Samples: 197

Max nTPM: 34.8
Min nTPM: 1.5
Std nTPM: 4.8
Median nTPM: 10.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 34.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 29.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 25.5
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 25.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 25.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 23.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 23.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 21.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 21.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 20.9
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 20.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 125.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.6
FF:10153-102I9 76 years, female 153.6
FF:10169-103B7 60 years, female 97.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 48.5
Pig sample Sample description nTPM
Subiculum
nTPM: 48.4
Samples: 4

Max nTPM: 64.6
Min nTPM: 39.0
Sample A Female 39.0
Sample B Female 41.4
Sample C Male 64.6
Sample D Male 48.7
Dorsal hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 10.9
Min nTPM: 5.8
Sample A Female 9.4
Sample B Female 9.0
Sample C Male 10.9
Sample D Male 5.8
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 36.1
Min nTPM: 14.1
Sample A Female 36.1
Sample B Female 20.9
Sample C Male 28.6
Sample D Male 14.1
Ventral hippocampus
nTPM: 43.3
Samples: 4

Max nTPM: 78.4
Min nTPM: 9.4
Sample A Female 53.8
Sample B Female 31.7
Sample C Male 78.4
Sample D Male 9.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 15.5
Min nTPM: 7.1
Sample A Male 8.2
Sample B Male 7.1
Sample C Female 10.9
Sample D Female 15.5
Hippocampal formation
nTPM: 8.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 5.9
Sample A Male 8.6
Sample B Male 8.7
Sample C Female 5.9
Sample D Female 10.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
308055507 Antisense, RP_140710_01_A03, Mouse strain C57BL/6J (56 days, male) 20.1
112646890 Antisense, RP_110407_01_A05, Mouse strain C57BL/6J (56 days, male) 3.2
724 Sense, RPS_Baylor_36951, Mouse strain C57BL/6J (56 days, male) 0.0

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