HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:4.4 nTPM
HPA Brain:17.4 nTPM
GTEx:4.4 nTPM
FANTOM5:13.6 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:21.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
1898 Male, age 80, left hemisphere 16.7
1855 Male, age 76, left hemisphere 16.2
2621 Female, age 67, right hemisphere 15.7
2529 Female, age 94, left hemisphere 15.3
2148 Female, age 91, left hemisphere 14.5
1911 Female, age 85, right hemisphere 13.7
Dentate gyrus
nTPM: 15.3
2010 Male, age 76, both hemispheres 19.3
1927 Female, age 91, both hemispheres 17.0
2246 Female, age 85, both hemispheres 16.1
2528 Male, age 74, both hemispheres 13.7
2530 Female, age 94, left hemisphere 13.1
2531 Female, age 67, both hemispheres 12.7
Entorhinal gyrus
nTPM: 14.5
2613 Female, age 94, left hemisphere 15.5
1787 Male, age 76, left hemisphere 15.3
2686 Male, age 75, right hemisphere 14.9
2764 Male, age 80, right hemisphere 14.7
1938 Female, age 85, left hemisphere 14.6
2117 Female, age 91, right hemisphere 12.0
Hippocampus, CA1
nTPM: 16.6
2749 Male, age 80, left hemisphere 19.8
1873 Female, age 85, both hemispheres 16.9
2045 Male, age 76, both hemispheres 16.8
2527 Male, age 74, both hemispheres 15.1
2082 Female, age 91, right hemisphere 14.5
Hippocampus, CA2
nTPM: 16.0
1963 Male, age 80, left hemisphere 19.3
1892 Male, age 76, both hemispheres 18.8
2437 Female, age 94, left hemisphere 16.1
2249 Male, age 74, both hemispheres 15.2
1940 Female, age 85, left hemisphere 14.7
2113 Female, age 91, right hemisphere 11.9
Hippocampus, CA3
nTPM: 14.9
2436 Male, age 74, both hemispheres 16.9
2137 Male, age 80, left hemisphere 16.8
1867 Male, age 76, both hemispheres 15.0
2620 Female, age 94, left hemisphere 13.8
1891 Female, age 85, both hemispheres 13.7
2861 Female, age 67, both hemispheres 13.5
Parahippocampal cortex
nTPM: 15.3
1850 Male, age 80, both hemispheres 17.3
2693 Female, age 94, both hemispheres 17.0
1933 Female, age 85, both hemispheres 16.9
2250 Female, age 67, right hemisphere 16.8
2532 Female, age 72, left hemisphere 14.8
2692 Male, age 74, both hemispheres 14.5
1990 Female, age 91, right hemisphere 14.4
2018 Male, age 76, both hemispheres 14.2
2622 Female, age 67, right hemisphere 14.0
2245 Female, age 91, both hemispheres 13.2
Perirhinal gyrus
nTPM: 17.4
1841 Female, age 85, right hemisphere 17.9
2521 Female, age 94, right hemisphere 17.7
1847 Female, age 91, left hemisphere 17.6
1794 Male, age 80, right hemisphere 17.0
2848 Male, age 76, right hemisphere 16.6
Subiculum
nTPM: 13.1
1901 Male, age 80, both hemispheres 15.0
1977 Female, age 85, both hemispheres 15.0
2619 Male, age 74, both hemispheres 14.3
2729 Female, age 91, right hemisphere 13.4
2042 Male, age 76, both hemispheres 10.5
2438 Female, age 94, left hemisphere 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.4
Samples: 197

Max nTPM: 8.5
Min nTPM: 1.3
Std nTPM: 1.1
Median nTPM: 4.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 8.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 8.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 7.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 7.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 6.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 6.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 6.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 6.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 6.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 6.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 6.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.6
FF:10153-102I9 76 years, female 14.7
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.4
Pig sample Sample description nTPM
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 16.3
Sample A Female 22.4
Sample B Female 17.2
Sample C Male 16.5
Sample D Male 16.3
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 17.8
Sample A Female 23.6
Sample B Female 23.7
Sample C Male 17.8
Sample D Male 20.4
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 20.1
Min nTPM: 16.6
Sample A Female 18.3
Sample B Female 20.1
Sample C Male 19.1
Sample D Male 16.6
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.6
Sample A Female 20.3
Sample B Female 16.6
Sample C Male 17.1
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 20.3
Min nTPM: 18.7
Sample A Male 18.8
Sample B Male 19.9
Sample C Female 20.3
Sample D Female 18.7
Hippocampal formation
nTPM: 21.5
Samples: 4

Max nTPM: 26.5
Min nTPM: 19.2
Sample A Male 26.5
Sample B Male 20.7
Sample C Female 19.2
Sample D Female 19.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70431205 Antisense, RP_050614_02_D05, Mouse strain C57BL/6J (56 days, male) 0.1

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