HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.6 nTPM
HPA Brain:15.6 nTPM
GTEx:11.6 nTPM
FANTOM5:1.9 Scaled Tags Per Million
Pig:4.7 nTPM
Mouse:0.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039049Antibody HPA039050
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.6
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
1898 Male, age 80, left hemisphere 11.5
1911 Female, age 85, right hemisphere 11.4
2529 Female, age 94, left hemisphere 11.4
2148 Female, age 91, left hemisphere 10.4
2621 Female, age 67, right hemisphere 10.3
1855 Male, age 76, left hemisphere 8.4
Dentate gyrus
nTPM: 9.7
2010 Male, age 76, both hemispheres 11.7
2531 Female, age 67, both hemispheres 10.6
2530 Female, age 94, left hemisphere 10.3
2528 Male, age 74, both hemispheres 8.7
2246 Female, age 85, both hemispheres 8.5
1927 Female, age 91, both hemispheres 8.3
Entorhinal gyrus
nTPM: 15.6
2613 Female, age 94, left hemisphere 20.2
2764 Male, age 80, right hemisphere 18.2
2686 Male, age 75, right hemisphere 14.9
1938 Female, age 85, left hemisphere 14.3
1787 Male, age 76, left hemisphere 13.3
2117 Female, age 91, right hemisphere 12.6
Hippocampus, CA1
nTPM: 10.0
2749 Male, age 80, left hemisphere 13.2
2082 Female, age 91, right hemisphere 11.2
1873 Female, age 85, both hemispheres 9.9
2527 Male, age 74, both hemispheres 9.7
2045 Male, age 76, both hemispheres 5.8
Hippocampus, CA2
nTPM: 11.4
2437 Female, age 94, left hemisphere 13.2
1892 Male, age 76, both hemispheres 13.0
1940 Female, age 85, left hemisphere 11.4
1963 Male, age 80, left hemisphere 10.9
2113 Female, age 91, right hemisphere 10.3
2249 Male, age 74, both hemispheres 9.5
Hippocampus, CA3
nTPM: 11.1
1867 Male, age 76, both hemispheres 12.7
2620 Female, age 94, left hemisphere 12.2
1891 Female, age 85, both hemispheres 11.6
2861 Female, age 67, both hemispheres 11.2
2137 Male, age 80, left hemisphere 11.0
2436 Male, age 74, both hemispheres 7.9
Parahippocampal cortex
nTPM: 12.6
2622 Female, age 67, right hemisphere 16.7
2692 Male, age 74, both hemispheres 13.8
1990 Female, age 91, right hemisphere 13.6
2245 Female, age 91, both hemispheres 12.4
1933 Female, age 85, both hemispheres 12.2
2250 Female, age 67, right hemisphere 12.1
1850 Male, age 80, both hemispheres 11.6
2018 Male, age 76, both hemispheres 11.6
2532 Female, age 72, left hemisphere 11.4
2693 Female, age 94, both hemispheres 11.0
Perirhinal gyrus
nTPM: 12.0
1794 Male, age 80, right hemisphere 14.2
1847 Female, age 91, left hemisphere 12.8
2521 Female, age 94, right hemisphere 12.2
1841 Female, age 85, right hemisphere 10.4
2848 Male, age 76, right hemisphere 10.2
Subiculum
nTPM: 13.0
2438 Female, age 94, left hemisphere 16.5
1977 Female, age 85, both hemispheres 14.4
2619 Male, age 74, both hemispheres 14.4
1901 Male, age 80, both hemispheres 13.2
2042 Male, age 76, both hemispheres 10.5
2729 Female, age 91, right hemisphere 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 38.6
Min nTPM: 3.8
Std nTPM: 4.5
Median nTPM: 10.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 38.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 23.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 23.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 23.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 22.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 22.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 22.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 22.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 19.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 19.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.9
FF:10169-103B7 60 years, female 2.0
FF:10153-102I9 76 years, female 1.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 4.7
Pig sample Sample description nTPM
Subiculum
nTPM: 3.7
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.1
Sample A Female 3.2
Sample B Female 3.9
Sample C Male 4.7
Sample D Male 3.1
Dorsal hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.6
Sample A Female 4.3
Sample B Female 4.1
Sample C Male 4.0
Sample D Male 3.6
Entorhinal cortex
nTPM: 3.2
Samples: 4

Max nTPM: 3.5
Min nTPM: 3.0
Sample A Female 3.1
Sample B Female 3.1
Sample C Male 3.0
Sample D Male 3.5
Ventral hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 5.9
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 4.6
Sample C Male 5.9
Sample D Male 4.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.1
Sample D Female 0.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69407935 Antisense, RP_050414_02_F12, Mouse strain C57BL/6J (56 days, male) 0.3

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