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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFITM2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
409.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
161.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
160.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
123.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
122.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
93.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
83.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
83.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
80.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
79.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
79.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
78.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
78.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
76.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
73.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
72.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
71.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
69.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
68.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
68.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
67.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
64.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
63.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
61.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
61.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
60.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
59.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
58.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
57.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
54.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
50.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
48.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
46.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
45.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
44.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
43.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
41.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
38.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
38.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
37.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
36.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
34.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
33.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
33.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
33.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
31.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
29.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
28.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
27.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
25.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
24.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
20.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
14.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFITM2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
267.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
953.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
909.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
853.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
775.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
761.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
706.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
706.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
646.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
645.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
643.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
625.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
621.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
614.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
608.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
606.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
600.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
599.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
596.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
578.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
568.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
563.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
556.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
553.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
548.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
533.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
528.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
521.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
520.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
519.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
515.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
514.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
498.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
495.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
484.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
481.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
479.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
479.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
477.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
469.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
468.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
467.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
466.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
460.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
455.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
449.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
448.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
447.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
447.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
447.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
438.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
438.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
437.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
436.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
433.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
431.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
430.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
430.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
428.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
427.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
424.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
423.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
422.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
417.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
415.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
414.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
413.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
408.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
406.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
405.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
402.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
400.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
400.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
400.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
397.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
391.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
389.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
389.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
389.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
386.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
383.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
382.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
381.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
381.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
379.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
379.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
378.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
375.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
375.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
372.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
371.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
370.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
370.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
370.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
369.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
369.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
368.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
367.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
365.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
363.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
363.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
363.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
362.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
362.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
360.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
360.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
358.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
358.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
356.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
356.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
356.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
354.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
353.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
351.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
350.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
350.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
348.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
347.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
347.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
347.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
346.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
345.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
343.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
341.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
340.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
339.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
339.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
338.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
334.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
334.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
333.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
332.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
332.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
332.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
330.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
329.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
329.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
328.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
328.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
328.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
328.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
328.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
328.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
327.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
326.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
324.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
323.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
322.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
321.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
320.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
319.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
319.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
317.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
317.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
317.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
316.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
316.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
315.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
315.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
314.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
314.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
314.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
313.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
310.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
309.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
309.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
308.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
308.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
307.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
307.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
306.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
306.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
305.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
305.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
305.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
305.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
305.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
305.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
304.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
304.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
301.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
301.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
301.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
300.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
300.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
300.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
299.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
299.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
298.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
298.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
297.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
297.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
297.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
296.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
295.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
294.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
294.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
294.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
292.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
292.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
291.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
291.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
291.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
290.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
289.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
287.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
286.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
286.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
285.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
285.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
285.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
285.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
283.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
282.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
279.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
279.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
277.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
277.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
277.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
277.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
276.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
274.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
274.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
271.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
271.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
271.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
270.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
269.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
267.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
267.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
266.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
266.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
265.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
265.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
265.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
264.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
264.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
263.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
263.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
262.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
262.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
260.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
259.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
259.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
258.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
258.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
257.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
256.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
256.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
256.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
255.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
254.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
253.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
252.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
252.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
252.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
251.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
251.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
251.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
251.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
251.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
250.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
250.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
250.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
250.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
249.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
248.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
248.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
248.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
248.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
248.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
248.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
246.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
246.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
246.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
245.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
245.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
245.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
244.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
244.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
243.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
243.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
241.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
241.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
241.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
240.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
239.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
239.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
238.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
238.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
238.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
237.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
236.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
235.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
235.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
234.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
233.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
232.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
232.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
232.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
232.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
232.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
231.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
230.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
230.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
229.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
229.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
228.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
227.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
227.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
226.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
226.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
225.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
224.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
223.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
223.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
223.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
221.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
220.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
220.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
218.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
217.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
217.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
217.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
216.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
214.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
213.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
212.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
211.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
211.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
209.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
208.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
205.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
205.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
204.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
203.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
203.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
203.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
203.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
203.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
203.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
202.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
201.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
201.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
201.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
200.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
200.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
200.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
200.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
199.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
198.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
198.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
197.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
197.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
197.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
196.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
196.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
194.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
194.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
193.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
192.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
192.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
191.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
189.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
188.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
188.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
187.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
187.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
187.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
187.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
186.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
186.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
185.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
184.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
184.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
184.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
183.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
182.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
182.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
180.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
180.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
180.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
179.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
179.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
179.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
178.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
178.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
177.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
177.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
176.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
176.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
175.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
175.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
174.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
174.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
174.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
172.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
172.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
170.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
168.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
167.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
167.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
166.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
165.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
164.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
164.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
163.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
163.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
163.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
163.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
162.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
160.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
160.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
160.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
160.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
159.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
159.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
157.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
157.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
156.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
156.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
155.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
155.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
154.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
150.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
149.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
149.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
149.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
149.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
148.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
147.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
147.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
147.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
147.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
147.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
145.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
145.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
145.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
144.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
143.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
142.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
142.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
139.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
138.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
138.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
138.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
136.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
136.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
135.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
134.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
133.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
130.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
129.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
129.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
129.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
128.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
128.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
128.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
126.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
124.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
124.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
124.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
123.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
122.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
120.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
120.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
114.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
113.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
111.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
110.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
109.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
108.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
107.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
106.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
103.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
102.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
101.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
99.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
99.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
97.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
96.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
95.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
93.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
93.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
90.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
90.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
90.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
90.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
90.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
86.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
80.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
78.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
76.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
71.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
69.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
68.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
65.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
63.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
62.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
62.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
59.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
58.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
57.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
55.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
51.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
50.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
49.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
48.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
48.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
42.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
40.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
38.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
35.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
32.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
29.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFITM2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
154.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
126.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
122.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
112.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
110.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
110.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
97.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
95.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
90.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
82.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
81.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
78.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
77.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
75.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
74.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
73.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
70.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
70.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
68.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
66.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
66.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
65.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
64.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
63.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
63.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
62.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
62.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
62.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
61.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
60.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
60.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
59.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
58.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
57.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
57.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
56.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
54.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
54.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
54.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
54.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
54.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
53.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
53.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
52.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
52.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
50.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
50.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
50.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
49.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
48.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
48.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
47.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
46.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
46.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
46.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
46.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
45.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
42.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
41.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
41.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
40.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
40.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
39.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
37.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
37.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
35.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
34.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
34.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
33.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
31.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
30.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
23.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFITM2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
157.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
821.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
812.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
767.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
678.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
632.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
571.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
526.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
509.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
483.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
481.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
479.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
474.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
463.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
462.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
436.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
435.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
433.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
431.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
424.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
422.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
417.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
402.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
402.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
400.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
380.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
374.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
370.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
362.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
351.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
347.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
344.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
338.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
334.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
332.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
331.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
324.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
316.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
301.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
289.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
288.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
274.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
270.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
270.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
269.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
269.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
267.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
262.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
261.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
261.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
257.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
254.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
249.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
240.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
236.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
230.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
229.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
228.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
225.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
223.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
223.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
223.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
220.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
219.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
216.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
216.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
214.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
212.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
211.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
210.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
208.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
200.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
198.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
195.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
193.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
192.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
191.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
190.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
190.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
190.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
187.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
187.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
186.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
179.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
178.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
178.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
177.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
175.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
175.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
175.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
174.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
173.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
172.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
171.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
171.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
169.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
167.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
166.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
166.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
163.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
163.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
162.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
161.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
158.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
157.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
157.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
155.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
155.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
155.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
155.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
153.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
152.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
150.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
148.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
143.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
143.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
142.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
142.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
141.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
141.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
141.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
141.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
138.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
135.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
134.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
134.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
133.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
132.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
132.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
132.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
131.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
130.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
129.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
128.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
128.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
128.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
127.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
127.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
126.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
125.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
124.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
124.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
123.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
119.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
118.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
118.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
118.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
117.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
117.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
116.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
115.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
113.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
112.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
111.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
108.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
106.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
106.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
105.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
104.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
103.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
103.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
103.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
103.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
102.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
102.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
101.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
100.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
98.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
97.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
96.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
94.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
93.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
93.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
90.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
89.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
89.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
88.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
86.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
86.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
85.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
84.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
84.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
83.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
82.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
82.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
81.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
77.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
76.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
75.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
73.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
72.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
72.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
70.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
69.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
69.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
68.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
68.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
67.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
67.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
66.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
65.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
64.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
63.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
63.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
63.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
63.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
62.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
59.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
59.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
58.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
58.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
58.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
56.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
56.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
55.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
55.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
52.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
51.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
51.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
51.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
51.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
51.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
50.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
49.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
47.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
47.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
46.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
44.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
44.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
43.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
42.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
42.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
41.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
41.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
41.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
40.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
39.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
39.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
39.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
39.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
38.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
35.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
34.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
34.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
33.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
33.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
32.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
29.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
29.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
27.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
25.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
25.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
24.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
22.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
