HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.5 nTPM
HPA Brain:11.8 nTPM
GTEx:8.5 nTPM
FANTOM5:36.2 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:17.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062910
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 11.8
Sample id Sample description nTPM
Hippocampus
nTPM: 10.0
1898 Male, age 80, left hemisphere 11.5
1855 Male, age 76, left hemisphere 10.5
2621 Female, age 67, right hemisphere 10.5
2529 Female, age 94, left hemisphere 9.7
2148 Female, age 91, left hemisphere 9.5
1911 Female, age 85, right hemisphere 8.3
Dentate gyrus
nTPM: 10.3
1927 Female, age 91, both hemispheres 11.4
2010 Male, age 76, both hemispheres 11.3
2246 Female, age 85, both hemispheres 11.2
2530 Female, age 94, left hemisphere 10.3
2528 Male, age 74, both hemispheres 9.2
2531 Female, age 67, both hemispheres 8.6
Entorhinal gyrus
nTPM: 9.9
1938 Female, age 85, left hemisphere 12.4
1787 Male, age 76, left hemisphere 10.4
2613 Female, age 94, left hemisphere 9.6
2764 Male, age 80, right hemisphere 9.6
2686 Male, age 75, right hemisphere 9.1
2117 Female, age 91, right hemisphere 8.6
Hippocampus, CA1
nTPM: 11.0
2749 Male, age 80, left hemisphere 15.7
1873 Female, age 85, both hemispheres 12.2
2045 Male, age 76, both hemispheres 10.6
2527 Male, age 74, both hemispheres 9.0
2082 Female, age 91, right hemisphere 7.3
Hippocampus, CA2
nTPM: 10.1
1963 Male, age 80, left hemisphere 12.2
1892 Male, age 76, both hemispheres 11.1
1940 Female, age 85, left hemisphere 10.6
2249 Male, age 74, both hemispheres 10.6
2437 Female, age 94, left hemisphere 8.5
2113 Female, age 91, right hemisphere 7.4
Hippocampus, CA3
nTPM: 10.0
2137 Male, age 80, left hemisphere 12.1
1891 Female, age 85, both hemispheres 10.8
2620 Female, age 94, left hemisphere 10.8
1867 Male, age 76, both hemispheres 9.8
2436 Male, age 74, both hemispheres 9.0
2861 Female, age 67, both hemispheres 7.6
Parahippocampal cortex
nTPM: 10.1
1850 Male, age 80, both hemispheres 13.3
2245 Female, age 91, both hemispheres 10.8
2532 Female, age 72, left hemisphere 10.6
1933 Female, age 85, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.3
2692 Male, age 74, both hemispheres 9.6
2693 Female, age 94, both hemispheres 9.5
2018 Male, age 76, both hemispheres 9.4
2250 Female, age 67, right hemisphere 8.9
2622 Female, age 67, right hemisphere 8.0
Perirhinal gyrus
nTPM: 11.8
1847 Female, age 91, left hemisphere 14.2
1841 Female, age 85, right hemisphere 12.9
1794 Male, age 80, right hemisphere 12.0
2521 Female, age 94, right hemisphere 10.9
2848 Male, age 76, right hemisphere 9.1
Subiculum
nTPM: 9.6
1977 Female, age 85, both hemispheres 11.1
2042 Male, age 76, both hemispheres 10.1
2619 Male, age 74, both hemispheres 9.9
1901 Male, age 80, both hemispheres 9.3
2438 Female, age 94, left hemisphere 9.0
2729 Female, age 91, right hemisphere 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.5
Samples: 197

Max nTPM: 14.4
Min nTPM: 4.3
Std nTPM: 2.0
Median nTPM: 8.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 13.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 13.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 12.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 12.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 12.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 12.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 12.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.2
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 30.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.9
Pig sample Sample description nTPM
Subiculum
nTPM: 6.6
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.9
Sample A Female 7.6
Sample B Female 5.9
Sample C Male 5.9
Sample D Male 7.1
Dorsal hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.3
Sample A Female 6.3
Sample B Female 6.7
Sample C Male 6.9
Sample D Male 7.5
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.1
Min nTPM: 5.5
Sample A Female 6.9
Sample B Female 7.1
Sample C Male 5.5
Sample D Male 5.9
Ventral hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.2
Sample A Female 6.4
Sample B Female 5.2
Sample C Male 5.5
Sample D Male 7.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 16.0
Min nTPM: 14.3
Sample A Male 15.7
Sample B Male 15.8
Sample C Female 16.0
Sample D Female 14.3
Hippocampal formation
nTPM: 17.9
Samples: 4

Max nTPM: 18.9
Min nTPM: 16.8
Sample A Male 18.9
Sample B Male 18.5
Sample C Female 17.2
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
70598368 Antisense, RP_050407_04_G01, Mouse strain C57BL/6J (56 days, male) 1.0

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