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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP1MT is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
80.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
36.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
25.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
21.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
17.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
17.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
16.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
11.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
4.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP1MT is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
44.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
43.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
41.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
39.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
37.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
36.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
36.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
35.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
34.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
30.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
29.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
27.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
27.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
27.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
26.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
26.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
24.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
24.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
22.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
22.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
20.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
20.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
20.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
18.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
18.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
18.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
17.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
16.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
16.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
15.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
13.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
12.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
12.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
12.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
12.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
11.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
10.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
9.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
9.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
8.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
8.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
8.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
7.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
7.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
6.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
6.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
6.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
5.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
5.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
4.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP1MT is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
39.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
35.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
33.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
30.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
27.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
23.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
23.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
21.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
17.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
16.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
13.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
12.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
12.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
10.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
10.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
10.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
9.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
9.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
7.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP1MT is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
66.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
58.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
58.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
54.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
53.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
51.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
47.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
43.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
42.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
42.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
42.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
42.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
41.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
41.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
37.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
36.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
34.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
33.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
33.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
32.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
32.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
30.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
29.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
28.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
27.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
27.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
25.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
25.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
23.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
23.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
21.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
21.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
20.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
20.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
20.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
19.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
19.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
19.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
19.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
18.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
18.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
18.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
18.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
17.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
17.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
17.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
16.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
16.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
15.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
14.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
14.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
14.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
13.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
13.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
12.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
11.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
11.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
11.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
11.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
10.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
9.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
9.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
9.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
8.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
8.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
8.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
6.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
5.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
5.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
5.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
