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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:43.4 nTPM
HPA Brain:56.1 nTPM
GTEx:43.4 nTPM
FANTOM5:53.2 Scaled Tags Per Million
Pig:50.4 nTPM
Mouse:64.0 nTPM
Allen mouse:10.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059227
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 46.9
1857 Female, age 85, left hemisphere 53.7
1781 Male, age 74, unknown 51.0
2846 Female, age 79, unknown 49.6
2290 Female, age 72, unknown 47.5
1854 Male, age 80, left hemisphere 46.4
2481 Female, age 94, left hemisphere 45.8
2288 Male, age 75, left hemisphere 45.0
2289 Male, age 61, right hemisphere 36.6
Globus pallidus, externus
nTPM: 32.6
2772 Female, age 79, unknown 38.5
2395 Male, age 75, both hemispheres 36.5
2646 Male, age 61, right hemisphere 33.4
1996 Male, age 80, right hemisphere 29.4
2567 Female, age 72, unknown 25.3
Globus pallidus, internus
nTPM: 32.2
2483 Female, age 94, right hemisphere 42.7
1818 Male, age 74, unknown 38.0
2287 Male, age 75, right hemisphere 34.0
2037 Male, age 80, right hemisphere 30.2
2566 Female, age 72, unknown 29.3
2778 Female, age 91, both hemispheres 28.8
2111 Female, age 85, right hemisphere 22.3
Nucleus accumbens
nTPM: 48.0
1856 Female, age 91, right hemisphere 65.9
2824 Male, age 61, right hemisphere 53.9
1806 Female, age 85, left hemisphere 52.5
1783 Male, age 74, unknown 52.3
2698 Female, age 72, unknown 47.5
2286 Male, age 75, left hemisphere 46.1
2391 Female, age 94, left hemisphere 35.3
2732 Male, age 80, right hemisphere 30.8
Nucleus basalis of Meynert
nTPM: 39.9
2393 Male, age 80, right hemisphere 44.3
2484 Female, age 94, left hemisphere 42.3
2569 Male, age 61, both hemispheres 36.6
2821 Male, age 75, both hemispheres 36.5
Nucleus of the diagonal band
nTPM: 56.1
1812 Female, age 91, both hemispheres 64.7
2775 Male, age 80, right hemisphere 63.4
2195 Female, age 85, both hemispheres 54.1
2029 Male, age 61, right hemisphere 53.0
1979 Male, age 74, unknown 45.4
Putamen
nTPM: 46.2
1838 Male, age 80, right hemisphere 59.0
1937 Female, age 91, right hemisphere 56.4
2466 Female, age 79, unknown 52.1
1829 Male, age 74, unknown 45.7
2482 Female, age 94, left hemisphere 40.4
2647 Male, age 75, left hemisphere 38.0
2489 Female, age 72, unknown 31.6
Septal nuclei
nTPM: 49.5
1960 Male, age 74, unknown 60.6
2031 Female, age 72, unknown 57.3
2009 Female, age 91, both hemispheres 51.9
2629 Female, age 94, right hemisphere 47.0
2059 Female, age 85, both hemispheres 46.3
2394 Male, age 61, left hemisphere 45.2
2199 Male, age 80, right hemisphere 38.0
Stria terminalis, bed nucleus
nTPM: 51.5
1974 Female, age 91, both hemispheres 57.5
2486 Female, age 94, both hemispheres 50.4
2201 Male, age 74, unknown 46.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 37.6
Samples: 246

Max nTPM: 70.4
Min nTPM: 16.4
Std nTPM: 10.6
Median nTPM: 36.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 70.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 62.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 59.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 58.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 58.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 57.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 57.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 57.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 57.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 57.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 55.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 55.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 54.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 54.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 54.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 53.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 53.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 53.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 53.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 53.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 53.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 53.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 52.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 52.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 52.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 52.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 52.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 52.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 51.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 51.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 51.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 51.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 50.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 50.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 50.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 50.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 50.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 49.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 49.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 48.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 48.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 48.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 46.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 46.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 45.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 45.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 45.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 44.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 44.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 44.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 43.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 43.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 43.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 42.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 42.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 42.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 41.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 41.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 41.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 41.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 41.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 41.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 41.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 41.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 41.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 41.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 40.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 40.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 40.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 40.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 40.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 40.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 40.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 39.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 39.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 39.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 39.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 39.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 39.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 39.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 39.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 39.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 38.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 38.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 38.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 38.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 37.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 37.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 37.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 37.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 37.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 37.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 37.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 37.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 36.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 36.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 36.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 36.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 36.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 36.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 35.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 35.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 35.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 35.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 35.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 35.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 35.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 35.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 35.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 34.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 34.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 34.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 34.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 34.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 34.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 33.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 33.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 33.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 33.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 33.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 33.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 33.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 32.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 32.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 32.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 32.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 32.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 32.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 32.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 32.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 32.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 31.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 31.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 31.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 31.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 31.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 31.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 31.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 31.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 31.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 31.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 30.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 30.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 30.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 30.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 30.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 30.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 30.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 30.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 29.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 29.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 29.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 29.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 29.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 29.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 29.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 29.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 29.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 29.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 29.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 29.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 29.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 28.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 28.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 28.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 28.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 28.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 28.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 28.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 28.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 27.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 27.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 27.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 27.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 26.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 26.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 26.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 26.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 26.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 26.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 26.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 26.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 26.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 25.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 25.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 25.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 25.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 25.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 25.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 24.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 24.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 24.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 23.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 23.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 23.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 22.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 22.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 22.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 21.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 20.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 20.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 20.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 19.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 19.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 19.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 18.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 18.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 17.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 17.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 16.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 43.4
Samples: 246

Max nTPM: 73.9
Min nTPM: 15.8
Std nTPM: 11.8
Median nTPM: 44.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 73.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 72.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 67.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 65.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 64.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 63.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 63.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 63.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 63.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 62.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 61.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 61.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 61.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 61.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 61.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 61.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 61.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 60.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 60.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 60.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 59.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 59.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 59.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 58.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 58.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 58.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 57.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 57.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 57.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 57.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 57.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 57.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 57.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 56.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 56.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 56.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 56.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 56.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 56.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 55.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 55.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 55.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 55.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 55.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 54.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 54.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 54.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 54.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 53.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 53.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 53.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 53.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 53.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 52.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 52.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 52.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 52.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 52.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 52.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 52.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 52.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 52.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 51.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 51.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 51.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 51.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 51.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 50.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 50.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 50.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 50.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 50.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 50.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 50.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 50.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 50.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 50.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 49.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 49.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 49.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 49.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 48.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 48.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 48.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 48.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 48.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 47.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 47.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 47.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 47.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 47.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 47.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 47.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 47.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 47.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 47.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 47.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 46.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 46.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 46.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 46.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 46.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 46.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 46.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 46.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 45.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 45.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 45.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 45.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 45.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 45.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 44.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 44.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 44.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 44.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 44.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 44.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 44.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 44.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 43.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 43.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 43.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 43.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 43.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 43.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 42.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 42.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 42.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 41.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 41.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 41.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 40.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 40.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 40.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 40.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 40.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 39.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 39.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 39.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 39.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 39.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 39.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 39.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 39.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 39.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 39.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 39.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 39.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 39.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 38.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 38.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 38.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 38.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 37.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 37.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 37.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 37.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 37.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 36.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 36.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 36.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 36.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 36.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 36.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 36.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 35.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 35.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 35.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 35.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 35.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 35.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 35.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 35.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 35.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 34.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 34.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 33.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 33.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 33.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 33.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 32.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 32.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 32.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 32.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 32.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 32.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 32.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 32.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 32.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 31.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 31.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 31.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 31.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 31.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 31.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 31.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 31.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 30.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 30.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 30.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 30.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 29.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 29.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 29.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 29.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 29.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 29.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 28.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 28.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 28.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 28.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 27.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 26.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 26.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 25.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 25.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 25.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 25.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 24.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 24.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 23.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 23.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 23.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 22.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 22.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 21.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 21.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 21.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 20.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 20.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 20.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 20.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 20.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 19.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.8
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Brain - Putamen (basal ganglia)
Average nTPM: 37.2
Samples: 205

Max nTPM: 69.2
Min nTPM: 17.5
Std nTPM: 10.2
Median nTPM: 36.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 69.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 61.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 61.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 59.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 58.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 57.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 57.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 56.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 55.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 55.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 53.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 53.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 52.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 52.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 52.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 52.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 51.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 51.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 51.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 51.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 51.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 50.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 49.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 49.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 49.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 49.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 49.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 48.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 48.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 48.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 48.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 48.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 47.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 47.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 47.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 47.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 46.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 46.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 45.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 45.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 45.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 45.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 45.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 44.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 44.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 44.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 44.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 44.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 44.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 44.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 43.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 43.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 43.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 43.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 43.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 43.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 42.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 42.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 42.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 42.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 42.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 41.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 41.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 41.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 41.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 40.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 40.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 40.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 40.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 39.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 39.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 39.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 39.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 39.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 39.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 39.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 39.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 39.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 39.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 38.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 38.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 38.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 38.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 38.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 38.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 38.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 37.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 37.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 37.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 37.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 36.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 36.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 36.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 36.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 36.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 36.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 36.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 35.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 35.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 35.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 35.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 35.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 35.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 35.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 35.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 34.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 34.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 34.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 34.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 34.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 33.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 33.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 33.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 33.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 33.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 33.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 33.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 33.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 32.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 32.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 32.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 32.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 32.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 32.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 32.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 32.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 32.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 32.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 31.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 31.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 31.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 31.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 31.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 31.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 30.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 30.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 30.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 30.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 30.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 30.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 30.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 30.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 30.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 29.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 29.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 29.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 29.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 29.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 29.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 29.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 29.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 28.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 27.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 27.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 27.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 26.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 26.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 26.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 26.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 26.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 26.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 26.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 25.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 25.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 25.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 25.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 25.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 24.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 24.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 24.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 24.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 23.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 23.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 23.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 22.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 22.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 22.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 21.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 21.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 21.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 21.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 21.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 20.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 20.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 20.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 20.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 19.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 39.4
FF:10164-103B2 76 years, female 39.4
Nucleus accumbens
Scaled Tags Per Million: 44.1
FF:10037-101F1 23-56 years, mixed 44.1
Putamen
Scaled Tags Per Million: 53.2
FF:10176-103C5 60 years, female 53.2
Globus pallidus
Scaled Tags Per Million: 19.1
FF:10175-103C4 60 years, female 20.4
FF:10161-103A8 76 years, female 17.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.4
Pig sample Sample description nTPM
Caudate
nTPM: 46.2
Samples: 4

Max nTPM: 55.5
Min nTPM: 40.1
Sample A Female 40.1
Sample B Female 48.3
Sample C Male 55.5
Sample D Male 40.7
Putamen
nTPM: 42.8
Samples: 4

Max nTPM: 58.7
Min nTPM: 33.5
Sample A Female 33.5
Sample B Female 39.2
Sample C Male 58.7
Sample D Male 39.8
Septum
nTPM: 50.4
Samples: 4

Max nTPM: 62.4
Min nTPM: 40.7
Sample A Female 49.6
Sample B Female 48.8
Sample C Male 62.4
Sample D Male 40.7
Ventral pallidum
nTPM: 46.0
Samples: 4

Max nTPM: 57.5
Min nTPM: 35.4
Sample A Female 46.7
Sample B Female 44.4
Sample C Male 57.5
Sample D Male 35.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 59.6
Samples: 4

Max nTPM: 61.6
Min nTPM: 58.6
Sample A Male 61.6
Sample B Male 59.4
Sample C Female 58.7
Sample D Female 58.6
Septum
nTPM: 63.3
Samples: 4

Max nTPM: 72.5
Min nTPM: 58.2
Sample A Male 72.5
Sample B Male 63.4
Sample C Female 58.2
Sample D Female 59.0
Ventral forebrain
nTPM: 64.1
Samples: 4

Max nTPM: 67.2
Min nTPM: 61.2
Sample A Male 67.2
Sample B Male 66.5
Sample C Female 61.2
Sample D Female 61.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.5
69059970 Antisense, RP_050317_04_H03, Mouse strain C57BL/6J (56 days, male) 10.5
Pallidum
Expression energy: 10.3
69059970 Antisense, RP_050317_04_H03, Mouse strain C57BL/6J (56 days, male) 10.3

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