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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND5A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
66.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
35.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
34.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
32.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
32.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
32.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
31.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
27.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
26.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
19.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
18.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
16.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
15.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
14.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
14.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
8.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
7.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND5A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
71.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
65.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
60.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
60.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
60.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
57.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
57.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
57.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
56.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
56.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
54.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
54.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
53.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
52.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
52.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
51.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
51.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
51.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
50.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
50.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
50.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
49.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
49.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
49.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
49.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
48.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
48.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
48.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
48.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
48.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
48.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
48.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
47.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
47.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
46.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
46.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
46.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
46.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
45.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
45.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
45.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
45.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
45.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
45.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
45.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
44.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
44.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
44.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
44.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
44.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
44.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
44.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
44.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
43.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
43.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
43.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
43.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
43.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
43.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
43.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
43.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
42.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
42.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
42.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
41.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
41.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
41.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
41.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
41.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
41.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
41.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
41.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
41.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
41.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
41.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
40.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
40.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
40.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
40.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
40.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
40.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
40.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
40.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
40.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
40.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
39.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
39.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
39.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
39.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
39.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
39.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
39.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
39.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
39.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
38.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
38.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
38.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
38.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
38.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
38.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
38.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
38.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
38.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
38.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
38.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
37.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
37.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
37.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
37.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
37.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
37.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
37.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
36.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
36.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
36.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
36.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
36.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
36.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
36.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
36.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
36.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
35.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
35.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
35.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
35.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
35.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
35.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
35.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
35.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
35.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
35.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
35.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
34.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
34.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
34.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
34.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
34.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
34.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
34.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
34.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
34.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
34.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
34.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
33.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
33.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
33.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
33.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
33.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
33.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
33.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
32.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
32.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
32.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
32.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
32.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
32.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
32.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
32.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
32.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
32.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
32.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
31.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
31.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
31.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
31.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
31.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
31.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
31.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
30.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
30.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
30.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
30.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
30.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
30.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
30.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
30.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
30.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
30.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
30.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
29.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
29.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
29.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
29.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
29.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
29.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
29.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
29.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
29.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
29.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
29.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
28.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
28.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
28.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
28.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
28.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
27.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
27.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
27.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
27.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
27.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
27.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
27.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
27.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
27.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
26.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
26.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
26.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
26.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
26.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
26.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
25.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
24.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
24.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
22.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
22.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
22.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
22.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
21.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
19.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
19.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
19.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
17.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
15.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND5A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
88.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
76.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
73.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
68.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
68.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
65.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
58.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
58.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
58.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
57.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
57.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
57.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
55.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
55.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
54.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
53.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
53.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
50.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
50.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
49.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
48.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
48.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
48.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
48.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
47.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
46.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
45.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
45.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
45.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
43.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
43.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
43.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
42.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
42.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
41.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
41.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
40.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
39.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
37.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
37.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
37.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
37.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
36.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
36.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
35.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
33.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
31.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
29.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
29.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
27.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
25.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DENND5A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
60.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
54.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
46.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
44.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
43.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
42.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
42.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
40.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
35.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
33.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
33.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
31.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
30.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
29.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
28.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
28.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
28.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
28.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
27.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
27.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
26.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
26.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
25.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
25.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
24.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
23.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
22.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
20.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
19.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
19.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
18.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
17.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
16.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
16.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
16.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
15.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
14.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
13.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
13.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
12.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
10.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
9.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
9.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
3.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
3.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
1.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092730003
Tumor
1.2
CPT0088760003
Tumor
1.1
CPT0079180003
Tumor
0.9
CPT0025880003
Tumor
0.8
CPT0025920001
Normal
0.7
CPT0002350011
Tumor
0.7
CPT0066470004
Tumor
0.7
CPT0077310003
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0007860003
Tumor
0.6
CPT0076330003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0087040003
Tumor
0.6
CPT0077490003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0024670003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0092740003
Normal
0.4
CPT0021240003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0025350003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0082010001
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0020120003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0025230003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0077110003
Tumor
0.3
CPT0015810003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0025170003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0088480003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0088970003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0024680001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0078530001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0026420001
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0019130003
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0084590001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0006530001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0023710001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0012920003
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0020020001
Normal
-0.6
CPT0009060003
Tumor
-0.7
CPT0009020003
Normal
-0.7
CPT0017450001
Normal
-0.8
CPT0009080003
Normal
-0.9
CPT0078930003
Tumor
N/A
CPT0078940001
Normal
N/A
CPT0088640003
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.