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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOB2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
261.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
130.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
109.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
100.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
98.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
97.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
86.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
85.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
81.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
75.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
71.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
69.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
63.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
58.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
54.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
51.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
49.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
48.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
46.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
44.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
42.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
41.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
35.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
34.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
34.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
32.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
28.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
26.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
17.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
17.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
16.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
15.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOB2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
89.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
79.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
78.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
77.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
76.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
76.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
74.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
73.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
67.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
63.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
62.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
62.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
61.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
61.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
61.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
60.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
60.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
60.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
60.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
60.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
59.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
58.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
58.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
56.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
55.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
54.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
54.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
54.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
54.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
54.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
52.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
52.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
51.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
51.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
51.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
50.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
50.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
50.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
50.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
50.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
49.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
49.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
48.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
48.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
48.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
47.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
47.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
46.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
46.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
46.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
46.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
45.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
45.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
44.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
44.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
44.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
44.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
43.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
43.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
43.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
43.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
42.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
42.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
42.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
41.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
41.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
41.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
40.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
40.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
40.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
40.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
40.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
40.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
39.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
39.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
39.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
39.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
39.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
39.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
38.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
38.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
38.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
38.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
38.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
38.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
37.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
37.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
37.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
37.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
37.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
37.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
36.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
36.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
36.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
36.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
36.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
36.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
36.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
35.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
35.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
35.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
35.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
35.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
35.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
35.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
35.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
34.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
34.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
34.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
34.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
33.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
33.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
32.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
32.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
32.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
32.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
32.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
32.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
32.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
31.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
31.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
31.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
30.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
30.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
30.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
29.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
29.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
29.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
29.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
29.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
29.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
28.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
28.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
28.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
28.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
28.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
28.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
27.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
27.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
27.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
27.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
27.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
27.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
26.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
26.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
26.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
26.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
26.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
26.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
25.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
25.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
25.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
25.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
25.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
25.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
24.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
24.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
24.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
24.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
24.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
23.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
23.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
23.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
23.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
23.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
22.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
22.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
22.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
22.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
21.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
21.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
21.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
21.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
20.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
20.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
20.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
20.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
20.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
19.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
18.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
17.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
17.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
14.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOB2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
72.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
56.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
54.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
49.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
45.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
45.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
44.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
44.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
42.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
39.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
36.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
34.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
33.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
31.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
30.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
30.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
30.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
27.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
27.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
25.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
24.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
24.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
23.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
22.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
11.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOB2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
348.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
316.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
309.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
301.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
282.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
278.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
278.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
276.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
227.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
214.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
187.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
182.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
182.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
175.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
167.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
163.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
161.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
159.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
157.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
151.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
148.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
147.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
146.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
143.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
140.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
137.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
129.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
128.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
125.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
122.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
118.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
117.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
114.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
110.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
108.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
108.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
107.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
103.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
103.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
101.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
98.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
98.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
98.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
89.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
87.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
82.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
77.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
72.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
70.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
69.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
68.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
67.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
66.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
64.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
64.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
63.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
62.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
58.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
55.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
55.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
52.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
52.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
52.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
52.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
51.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
51.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
47.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
46.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
45.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
42.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
42.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
41.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
41.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
40.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
39.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
37.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
37.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
36.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
35.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
35.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
33.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
33.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
33.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
33.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
33.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
33.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
33.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
33.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
32.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
32.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
32.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
31.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
31.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
30.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
30.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
30.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
28.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
27.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
25.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
25.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
24.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
24.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
23.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
23.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
23.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
22.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
22.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
21.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
21.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
20.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
19.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
18.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
18.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
16.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
15.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
14.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065750003
Tumor
0.8
CPT0007860003
Tumor
0.8
CPT0078670001
Normal
0.7
CPT0015730003
Tumor
0.7
CPT0086030003
Tumor
0.7
CPT0019160001
Normal
0.6
CPT0000890001
Normal
0.6
CPT0014350001
Normal
0.5
CPT0079000001
Normal
0.4
CPT0076330003
Tumor
0.4
CPT0079380003
Tumor
0.3
CPT0079230003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0065870003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0086830003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0084590001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0078800003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0076350001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0012180003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0001350001
Normal
-0.4
CPT0017850003
Tumor
-0.5
CPT0012290003
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0014370004
Tumor
-0.6
CPT0019130003
Tumor
-0.9
CPT0078990003
Tumor
-1.1
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0082010001
Normal
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
