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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIRREL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
49.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
27.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
4.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
3.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
3.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
2.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIRREL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
111.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
62.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
60.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
60.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
59.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
55.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
53.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
50.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
48.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
47.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
47.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
46.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
45.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
44.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
44.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
44.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
41.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
40.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
40.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
39.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
39.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
39.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
38.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
37.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
37.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
36.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
36.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
36.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
36.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
35.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
35.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
35.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
34.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
34.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
34.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
33.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
33.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
33.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
33.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
33.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
32.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
32.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
31.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
31.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
30.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
29.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
29.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
29.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
29.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
29.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
28.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
28.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
28.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
28.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
28.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
27.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
27.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
26.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
26.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
26.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
26.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
26.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
26.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
25.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
25.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
25.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
24.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
23.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
23.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
21.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
21.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
20.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
20.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
20.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
20.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
19.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
16.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
16.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
15.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
12.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
9.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
8.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
7.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
7.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
7.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
7.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
6.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
6.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
5.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
5.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
4.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
4.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
3.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
3.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
3.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
2.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
2.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIRREL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
87.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
43.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
36.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
32.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
31.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
28.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
27.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
23.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
23.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
20.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
12.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
11.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
10.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
10.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
9.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
8.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
7.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
7.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
6.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
6.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
3.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
2.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIRREL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
73.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
71.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
55.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
48.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
36.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
35.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
29.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
25.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
23.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
22.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
20.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
20.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
18.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
14.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
12.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
12.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
11.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
10.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
10.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
9.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
9.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
8.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
8.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
8.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
8.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
8.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
8.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
7.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
6.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
5.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
5.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
5.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
5.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
4.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
4.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
3.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
3.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
3.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
3.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
3.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
2.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
2.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
0.8
CPT0089480003
Normal
0.8
CPT0088710001
Normal
0.7
CPT0077320001
Normal
0.6
CPT0082010001
Normal
0.6
CPT0081880003
Tumor
0.6
CPT0092740003
Normal
0.6
CPT0084560003
Tumor
0.6
CPT0092310003
Normal
0.5
CPT0025170003
Tumor
0.5
CPT0014130001
Normal
0.5
CPT0000660001
Normal
0.5
CPT0020020001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0077140001
Normal
0.5
CPT0026420001
Normal
0.5
CPT0025060001
Normal
0.5
CPT0023360001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0069010001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0001270001
Normal
0.4
CPT0012770003
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0088920001
Normal
0.3
CPT0078510003
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0069000003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0084590001
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0088780001
Normal
0.3
CPT0063630003
Tumor
0.3
CPT0081620001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0092790003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0007470001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0079430001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0014470001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0001180009
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0012180003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0023350003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0079300001
Normal
-0.3
CPT0000870016
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0081990003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0007870001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0012550003
Tumor
-0.5
CPT0079510001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0002370001
Normal
-0.5
CPT0025880003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0079270003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0078830003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0024670003
Tumor
-0.6
CPT0017410003
Tumor
-0.7
CPT0086870003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0026410003
Tumor
-0.7
CPT0085670003
Tumor
-0.7
CPT0077110003
Tumor
-0.8
CPT0012900004
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0012370003
Tumor
-0.9
CPT0065750003
Tumor
-1.1
CPT0078800003
Tumor
-1.3
CPT0079180003
Tumor
-1.6
CPT0015730003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.